RNA–Protein interactions for RNA: YBR161W

CSH1, Transcript of Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit, yeast

Gene CSH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSH1	YBR161W	YGR126W	P53274	230 aa		4.1	□□□□□ -1.75
CSH1	YBR161W	MSC1	Q03104	513 aa		4.1	□□□□□ -1.75
CSH1	YBR161W	YDL057W	Q07379	328 aa		4.1	□□□□□ -1.75
CSH1	YBR161W	CDC45	Q08032	650 aa		4.1	□□□□□ -1.75
CSH1	YBR161W	SDH5	Q08230	162 aa		4.1	□□□□□ -1.75
CSH1	YBR161W	MRP13	P12686	339 aa		4.09	□□□□□ -1.75
CSH1	YBR161W	CBS1	P14066	229 aa		4.09	□□□□□ -1.75
CSH1	YBR161W	OLE1	P21147	510 aa	Known RBP	4.09	□□□□□ -1.75
CSH1	YBR161W	YUR1	P26725	428 aa		4.09	□□□□□ -1.75
CSH1	YBR161W	ACH1	P32316	526 aa		4.09	□□□□□ -1.75
CSH1	YBR161W	YKL023W	P36103	277 aa	Known RBP	4.09	□□□□□ -1.75
CSH1	YBR161W	RTT107	P38850	1070 aa		4.09	□□□□□ -1.75
CSH1	YBR161W	YJL068C	P40363	299 aa		4.09	□□□□□ -1.75
CSH1	YBR161W	SHR3	Q02774	210 aa		4.09	□□□□□ -1.75
CSH1	YBR161W	NDD1	Q08887	554 aa		4.09	□□□□□ -1.75
CSH1	YBR161W	GCN4	P03069	281 aa		4.08	□□□□□ -1.76
CSH1	YBR161W	CDC23	P16522	626 aa		4.08	□□□□□ -1.76
CSH1	YBR161W	ART10	P18634	518 aa	Known RBP	4.08	□□□□□ -1.76
CSH1	YBR161W	RPS2	P25443	254 aa	Known RBP	4.08	□□□□□ -1.76
CSH1	YBR161W	IMP2'	P32351	346 aa		4.08	□□□□□ -1.76
CSH1	YBR161W	TIF3	P34167	436 aa	Known RBP	4.08	□□□□□ -1.76
CSH1	YBR161W	YNK1	P36010	153 aa	Known RBP	4.08	□□□□□ -1.76
CSH1	YBR161W	YER130C	P39959	443 aa		4.08	□□□□□ -1.76
CSH1	YBR161W	GUF1	P46943	645 aa		4.08	□□□□□ -1.76
CSH1	YBR161W	IMD4	P50094	524 aa	Known RBP	4.08	□□□□□ -1.76
CSH1	YBR161W	YGR066C	P53242	292 aa		4.08	□□□□□ -1.76
CSH1	YBR161W	YEH2	Q07950	538 aa		4.08	□□□□□ -1.76
CSH1	YBR161W	TIP41	Q12199	356 aa		4.08	□□□□□ -1.76
CSH1	YBR161W	YJR112W-A	Q3E743	109 aa		4.08	□□□□□ -1.76
CSH1	YBR161W	PEP5	P12868	1029 aa		4.07	□□□□□ -1.76
CSH1	YBR161W	SEC62	P21825	274 aa		4.07	□□□□□ -1.76
CSH1	YBR161W	SEC1	P30619	724 aa	Known RBP	4.07	□□□□□ -1.76
CSH1	YBR161W	RMD8	P43620	662 aa		4.07	□□□□□ -1.76
CSH1	YBR161W	VPS75	P53853	264 aa		4.07	□□□□□ -1.76
CSH1	YBR161W	RHO4	Q00246	291 aa		4.07	□□□□□ -1.76
CSH1	YBR161W	GLO2	Q05584	274 aa		4.07	□□□□□ -1.76
CSH1	YBR161W	RRI2	Q12348	645 aa		4.07	□□□□□ -1.76
CSH1	YBR161W	PDH1	Q12428	516 aa	Known RBP	4.07	□□□□□ -1.76
CSH1	YBR161W	MET8	P15807	274 aa		4.06	□□□□□ -1.76
CSH1	YBR161W	PDA1	P16387	420 aa	Known RBP	4.06	□□□□□ -1.76
CSH1	YBR161W	VPS17	P32913	551 aa		4.06	□□□□□ -1.76
CSH1	YBR161W	SRO77	P38163	1010 aa		4.06	□□□□□ -1.76
CSH1	YBR161W	YJL070C	P40361	888 aa		4.06	□□□□□ -1.76
CSH1	YBR161W	DOT5	P40553	215 aa		4.06	□□□□□ -1.76
CSH1	YBR161W	DIM1	P41819	318 aa	Known RBP	4.06	□□□□□ -1.76
CSH1	YBR161W	RBG2	P53295	368 aa	Known RBP	4.06	□□□□□ -1.76
CSH1	YBR161W	BUD32	P53323	261 aa		4.06	□□□□□ -1.76
CSH1	YBR161W	CRZ1	P53968	678 aa		4.06	□□□□□ -1.76
CSH1	YBR161W	SAM50	P53969	484 aa		4.06	□□□□□ -1.76
CSH1	YBR161W	RPT6	Q01939	405 aa	Known RBP	4.06	□□□□□ -1.76
CSH1	YBR161W	RBA50	Q04418	439 aa		4.06	□□□□□ -1.76
CSH1	YBR161W	YMR317W	Q04893	1140 aa		4.06	□□□□□ -1.76
CSH1	YBR161W	GAL80	P04387	435 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	SWE1	P32944	819 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	ECM15	P35195	104 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	TCD2	P36101	447 aa	Known RBP	4.05	□□□□□ -1.76
CSH1	YBR161W	YBR225W	P38321	900 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
CSH1	YBR161W	YGL260W	P53056	76 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	TIM10	P87108	93 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	COQ9	Q05779	260 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	VPS38	Q05919	439 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	THI20	Q08224	551 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	DAP1	Q12091	152 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	RLM1	Q12224	676 aa		4.05	□□□□□ -1.76
CSH1	YBR161W	HSH49	Q99181	213 aa	Predicted RBP	4.05	□□□□□ -1.76
CSH1	YBR161W	PMS1	P14242	873 aa		4.04	□□□□□ -1.76
CSH1	YBR161W	YME1	P32795	747 aa		4.04	□□□□□ -1.76
CSH1	YBR161W	YHR210C	P38893	341 aa		4.04	□□□□□ -1.76
CSH1	YBR161W	YTA12	P40341	825 aa		4.04	□□□□□ -1.76
CSH1	YBR161W	ALT2	P52892	507 aa		4.04	□□□□□ -1.76
CSH1	YBR161W	ARE2	P53629	642 aa	Known RBP	4.04	□□□□□ -1.76
CSH1	YBR161W	MFB1	Q04922	465 aa		4.04	□□□□□ -1.76
CSH1	YBR161W	IMH1	Q06704	911 aa	Known RBP	4.04	□□□□□ -1.76
CSH1	YBR161W	MED1	Q12321	566 aa		4.04	□□□□□ -1.76
CSH1	YBR161W	AVL9	Q12500	764 aa		4.04	□□□□□ -1.76
CSH1	YBR161W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
CSH1	YBR161W	YML002W	P0CF17	737 aa		4.03	□□□□□ -1.76
CSH1	YBR161W	APE1	P14904	514 aa		4.03	□□□□□ -1.76
CSH1	YBR161W	SGV1	P23293	657 aa	Known RBP	4.03	□□□□□ -1.76
CSH1	YBR161W	OCA4	P25366	362 aa		4.03	□□□□□ -1.76
CSH1	YBR161W	PAP1	P29468	568 aa	Known RBP	4.03	□□□□□ -1.76
CSH1	YBR161W	FMP46	P36141	133 aa	Known RBP	4.03	□□□□□ -1.76
CSH1	YBR161W	MSR1	P38714	643 aa		4.03	□□□□□ -1.76
CSH1	YBR161W	ALK1	P43633	760 aa	Known RBP	4.03	□□□□□ -1.76
CSH1	YBR161W	IKS1	P47042	667 aa		4.03	□□□□□ -1.76
CSH1	YBR161W	YJR154W	P47181	346 aa		4.03	□□□□□ -1.76
CSH1	YBR161W	TOF2	Q02208	771 aa		4.03	□□□□□ -1.76
CSH1	YBR161W	FIN1	Q03898	291 aa		4.03	□□□□□ -1.76
CSH1	YBR161W	THP1	Q08231	455 aa		4.03	□□□□□ -1.76
CSH1	YBR161W	NCE102	Q12207	173 aa	RIP-Chip data	4.03	□□□□□ -1.76	not detected
CSH1	YBR161W	PEP4	P07267	405 aa	Known RBP	4.02	□□□□□ -1.77
CSH1	YBR161W	SHP1	P34223	423 aa		4.02	□□□□□ -1.77
CSH1	YBR161W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	RIP-Chip
CSH1	YBR161W	CSM2	P40465	213 aa		4.02	□□□□□ -1.77
CSH1	YBR161W	YMR087W	Q04299	284 aa		4.02	□□□□□ -1.77
CSH1	YBR161W	RPC11	Q04307	110 aa	Predicted RBP	4.02	□□□□□ -1.77
CSH1	YBR161W	YOR365C	Q08844	703 aa		4.02	□□□□□ -1.77
CSH1	YBR161W	FOB1	O13329	566 aa		4.01	□□□□□ -1.77
CSH1	YBR161W	CAR1	P00812	333 aa	Known RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms