RNA–Protein interactions for RNA: YBR111C

YSA1, Transcript of Nudix hydrolase family member with ADP-ribose pyrophosphatase activity, yeast

Gene YSA1, Length 696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSA1	YBR111C	YBR225W	P38321	900 aa		4.59	□□□□□ -1.67
YSA1	YBR111C	SNG1	P46950	547 aa		4.59	□□□□□ -1.67
YSA1	YBR111C	ALT2	P52892	507 aa		4.59	□□□□□ -1.67
YSA1	YBR111C	HOS2	P53096	452 aa	Predicted RBP	4.59	□□□□□ -1.67
YSA1	YBR111C	LCL3	P53153	274 aa		4.59	□□□□□ -1.67
YSA1	YBR111C	SMM1	P53720	384 aa	Known RBP	4.59	□□□□□ -1.67
YSA1	YBR111C	MSS11	Q03825	758 aa		4.59	□□□□□ -1.67
YSA1	YBR111C	YDR415C	Q04033	374 aa	Predicted RBP	4.59	□□□□□ -1.67
YSA1	YBR111C	BSC1	Q12140	328 aa		4.59	□□□□□ -1.67
YSA1	YBR111C	AVL9	Q12500	764 aa		4.59	□□□□□ -1.67
YSA1	YBR111C	RTP1	Q12751	981 aa		4.59	□□□□□ -1.67
YSA1	YBR111C	SGS1	P35187	1447 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	MET8	P15807	274 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	PRD1	P25375	712 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	PEP3	P27801	918 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	ERG1	P32476	496 aa	Known RBP	4.58	□□□□□ -1.68
YSA1	YBR111C	TIF3	P34167	436 aa	Known RBP	4.58	□□□□□ -1.68
YSA1	YBR111C	YHR210C	P38893	341 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	YAT2	P40017	923 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	DIM1	P41819	318 aa	Known RBP	4.58	□□□□□ -1.68
YSA1	YBR111C	RMD8	P43620	662 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	ALK1	P43633	760 aa	Known RBP	4.58	□□□□□ -1.68
YSA1	YBR111C	STB2	P46679	850 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	ARE2	P53629	642 aa	Known RBP	4.58	□□□□□ -1.68
YSA1	YBR111C	DUG3	P53871	357 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	SHR3	Q02774	210 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	VPS38	Q05919	439 aa		4.58	□□□□□ -1.68
YSA1	YBR111C	TRS65	P32893	560 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	VPS17	P32913	551 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	UBP11	P36026	717 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	TCD2	P36101	447 aa	Known RBP	4.57	□□□□□ -1.68
YSA1	YBR111C	RIM2	P38127	377 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	NPR2	P39923	615 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	YJL070C	P40361	888 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	AXL1	P40851	1208 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	YJR154W	P47181	346 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	SAM50	P53969	484 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	TDA9	Q04545	1251 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	TSR2	Q06672	205 aa	Known RBP	4.57	□□□□□ -1.68
YSA1	YBR111C	THI20	Q08224	551 aa		4.57	□□□□□ -1.68
YSA1	YBR111C	MRP13	P12686	339 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	PDA1	P16387	420 aa	Known RBP	4.56	□□□□□ -1.68
YSA1	YBR111C	EST1	P17214	699 aa	Predicted RBP	4.56	□□□□□ -1.68
YSA1	YBR111C	GLN3	P18494	730 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	PPZ1	P26570	692 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	PAP1	P29468	568 aa	Known RBP	4.56	□□□□□ -1.68
YSA1	YBR111C	ACH1	P32316	526 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	RPN12	P32496	274 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	YNK1	P36010	153 aa	Known RBP	4.56	□□□□□ -1.68
YSA1	YBR111C	MUM2	P38236	366 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	YER130C	P39959	443 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	MET28	P40573	187 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	ARF3	P40994	183 aa	RIP-Chip data	4.56	□□□□□ -1.68	not detected
YSA1	YBR111C	AZF1	P41696	914 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	IMD4	P50094	524 aa	Known RBP	4.56	□□□□□ -1.68
YSA1	YBR111C	RPT6	Q01939	405 aa	Known RBP	4.56	□□□□□ -1.68
YSA1	YBR111C	TOF2	Q02208	771 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	YPL014W	Q02606	381 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	COG4	Q06096	861 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	DIC1	Q06143	298 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	YOR365C	Q08844	703 aa		4.56	□□□□□ -1.68
YSA1	YBR111C	NCE102	Q12207	173 aa	RIP-Chip data	4.56	□□□□□ -1.68	not detected
YSA1	YBR111C	SEC1	P30619	724 aa	Known RBP	4.55	□□□□□ -1.68
YSA1	YBR111C	MRE11	P32829	692 aa		4.55	□□□□□ -1.68
YSA1	YBR111C	GCS1	P35197	352 aa		4.55	□□□□□ -1.68
YSA1	YBR111C	MSR1	P38714	643 aa		4.55	□□□□□ -1.68
YSA1	YBR111C	CSM2	P40465	213 aa		4.55	□□□□□ -1.68
YSA1	YBR111C	MEP2	P41948	499 aa		4.55	□□□□□ -1.68
YSA1	YBR111C	RBG2	P53295	368 aa	Known RBP	4.55	□□□□□ -1.68
YSA1	YBR111C	IPI3	P53877	555 aa		4.55	□□□□□ -1.68
YSA1	YBR111C	TDA7	P53882	636 aa	Predicted RBP	4.55	□□□□□ -1.68
YSA1	YBR111C	MFB1	Q04922	465 aa		4.55	□□□□□ -1.68
YSA1	YBR111C	GLO2	Q05584	274 aa		4.55	□□□□□ -1.68
YSA1	YBR111C	NDD1	Q08887	554 aa		4.55	□□□□□ -1.68
YSA1	YBR111C	CSR2	Q12734	1121 aa		4.55	□□□□□ -1.68
YSA1	YBR111C	BRR1	Q99177	341 aa	Predicted RBP	4.55	□□□□□ -1.68
YSA1	YBR111C	PEP4	P07267	405 aa	Known RBP	4.54	□□□□□ -1.68
YSA1	YBR111C	RPS2	P25443	254 aa	Known RBP	4.54	□□□□□ -1.68
YSA1	YBR111C	WBP1	P33767	430 aa	Known RBP	4.54	□□□□□ -1.68
YSA1	YBR111C	SHP1	P34223	423 aa		4.54	□□□□□ -1.68
YSA1	YBR111C	ECM15	P35195	104 aa		4.54	□□□□□ -1.68
YSA1	YBR111C	ESL1	P40456	1118 aa		4.54	□□□□□ -1.68
YSA1	YBR111C	IRC6	P43615	237 aa		4.54	□□□□□ -1.68
YSA1	YBR111C	ROK1	P45818	564 aa	Predicted RBP	4.54	□□□□□ -1.68
YSA1	YBR111C	SCS3	P53012	380 aa		4.54	□□□□□ -1.68
YSA1	YBR111C	FMP45	Q07651	309 aa		4.54	□□□□□ -1.68
YSA1	YBR111C	RLM1	Q12224	676 aa		4.54	□□□□□ -1.68
YSA1	YBR111C	SEC39	Q12745	709 aa		4.54	□□□□□ -1.68
YSA1	YBR111C	FOB1	O13329	566 aa		4.53	□□□□□ -1.68
YSA1	YBR111C	GAL80	P04387	435 aa		4.53	□□□□□ -1.68
YSA1	YBR111C	PMS1	P14242	873 aa		4.53	□□□□□ -1.68
YSA1	YBR111C	YJL068C	P40363	299 aa		4.53	□□□□□ -1.68
YSA1	YBR111C	SPO22	P40511	975 aa		4.53	□□□□□ -1.68
YSA1	YBR111C	MAF1	P41910	395 aa		4.53	□□□□□ -1.68
YSA1	YBR111C	YDL057W	Q07379	328 aa		4.53	□□□□□ -1.68
YSA1	YBR111C	NRT1	Q08485	598 aa		4.53	□□□□□ -1.68
YSA1	YBR111C	PDH1	Q12428	516 aa	Known RBP	4.53	□□□□□ -1.68
YSA1	YBR111C	HSH49	Q99181	213 aa	Predicted RBP	4.53	□□□□□ -1.68
YSA1	YBR111C	PRP2	P20095	876 aa	Predicted RBP	4.52	□□□□□ -1.69
YSA1	YBR111C	SEC62	P21825	274 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms