RNA–Protein interactions for RNA: ENST00000589165.5

ERCC1-208, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ERCC1, Length 1,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-208ENST00000589165 GRM4Q14833 912 aa16.17■□□□□ 0.18
ERCC1-208ENST00000589165 CDC37Q16543 378 aaPredicted RBP16.17■□□□□ 0.18
ERCC1-208ENST00000589165 NSMFQ6X4W1 530 aa16.17■□□□□ 0.18
ERCC1-208ENST00000589165 ARMCX2Q7L311 632 aa16.17■□□□□ 0.18
ERCC1-208ENST00000589165 STAG2Q8N3U4 1231 aa16.17■□□□□ 0.18
ERCC1-208ENST00000589165 RGS22Q8NE09 1264 aa16.17■□□□□ 0.18
ERCC1-208ENST00000589165 JMJD4Q9H9V9 463 aa16.17■□□□□ 0.18
ERCC1-208ENST00000589165 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.17■□□□□ 0.18
ERCC1-208ENST00000589165 LOC102724159A0A0B4J2E5 919 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 KLRF2D3W0D1 207 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 PRC1O43663 620 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 RARBP10826 455 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 ACVR2BQ13705 512 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 PWP2Q15269 919 aaKnown RBP16.16■□□□□ 0.18
ERCC1-208ENST00000589165 TSGA10IPQ3SY00 556 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 CATIPQ7Z7H3 387 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 CCDC144CPQ8IYA2 1237 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 TMTC2Q8N394 836 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 LY9Q9HBG7 655 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 FAM184BQ9ULE4 1060 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 NR2E3Q9Y5X4 410 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 ASTN1O14525 1302 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 EVI5O60447 810 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 BAATQ14032 418 aaPredicted RBP16.16■□□□□ 0.18
ERCC1-208ENST00000589165 QRICH1Q2TAL8 776 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 MORC4Q8TE76 937 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 MTMR8Q96EF0 704 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 TMEM87BQ96K49 555 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 MAP3K14Q99558 947 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 KATNBL1Q9H079 304 aa16.16■□□□□ 0.18
ERCC1-208ENST00000589165 ZHX1Q9UKY1 873 aaPredicted RBP16.16■□□□□ 0.18
ERCC1-208ENST00000589165 H0YGN5 161 aa16.15■□□□□ 0.18
ERCC1-208ENST00000589165 LIFRP42702 1097 aa16.15■□□□□ 0.18
ERCC1-208ENST00000589165 ANO1Q5XXA6 986 aa16.15■□□□□ 0.18
ERCC1-208ENST00000589165 RNF207Q6ZRF8 634 aa16.15■□□□□ 0.18
ERCC1-208ENST00000589165 XPNPEP3Q9NQH7 507 aa16.15■□□□□ 0.18
ERCC1-208ENST00000589165 ADD3Q9UEY8 706 aaKnown RBP16.15■□□□□ 0.18
ERCC1-208ENST00000589165 ABCB11O95342 1321 aa16.15■□□□□ 0.18
ERCC1-208ENST00000589165 PLXNA1Q9UIW2 1896 aa16.14■□□□□ 0.17
ERCC1-208ENST00000589165 PTPDC1A2A3K4 754 aa16.14■□□□□ 0.17
ERCC1-208ENST00000589165 KBTBD13C9JR72 458 aa16.14■□□□□ 0.17
ERCC1-208ENST00000589165 SH2B2O14492 632 aaPredicted RBP16.14■□□□□ 0.17
ERCC1-208ENST00000589165 DHX16O60231 1041 aaKnown RBP16.14■□□□□ 0.17
ERCC1-208ENST00000589165 DDAH1O94760 285 aa16.14■□□□□ 0.17
ERCC1-208ENST00000589165 COL9A3Q14050 684 aaPredicted RBP16.14■□□□□ 0.17
ERCC1-208ENST00000589165 LRRC41Q15345 812 aa16.14■□□□□ 0.17
ERCC1-208ENST00000589165 USH1GQ495M9 461 aa16.14■□□□□ 0.17
ERCC1-208ENST00000589165 GJC2Q5T442 439 aaPredicted RBP16.14■□□□□ 0.17
ERCC1-208ENST00000589165 FBXO11Q86XK2 927 aa16.14■□□□□ 0.17
ERCC1-208ENST00000589165 RIOX1Q9H6W3 641 aa16.14■□□□□ 0.17
ERCC1-208ENST00000589165 VAT1LQ9HCJ6 419 aa16.14■□□□□ 0.17
ERCC1-208ENST00000589165 SMCHD1A6NHR9 2005 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 ZBTB5O15062 677 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 DUSP11O75319 330 aaKnown RBP16.13■□□□□ 0.17
ERCC1-208ENST00000589165 RPS6P62753 249 aaKnown RBP16.13■□□□□ 0.17
ERCC1-208ENST00000589165 KRT32Q14532 448 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 SLC35G1Q2M3R5 365 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 CCDC144BQ3MJ40 725 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 SLC30A10Q6XR72 485 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 RNF180Q86T96 592 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 MCF2L2Q86YR7 1114 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 ZNF654Q8IZM8 581 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 KCNB2Q92953 911 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 NEK1Q96PY6 1258 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 PURBQ96QR8 312 aaKnown RBP16.13■□□□□ 0.17
ERCC1-208ENST00000589165 AMNQ9BXJ7 453 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 SENP6Q9GZR1 1112 aaPredicted RBP16.13■□□□□ 0.17
ERCC1-208ENST00000589165 GPHNQ9NQX3 736 aaPredicted RBP16.13■□□□□ 0.17
ERCC1-208ENST00000589165 MRPL11Q9Y3B7 192 aaKnown RBP16.13■□□□□ 0.17
ERCC1-208ENST00000589165 DNAH12Q6ZR08 3092 aa16.13■□□□□ 0.17
ERCC1-208ENST00000589165 RANBP2P49792 3224 aaKnown RBP16.13■□□□□ 0.17
ERCC1-208ENST00000589165 ADAMTS4O75173 837 aa16.12■□□□□ 0.17
ERCC1-208ENST00000589165 CALML3P27482 149 aa16.12■□□□□ 0.17
ERCC1-208ENST00000589165 KIF5BP33176 963 aa16.12■□□□□ 0.17
ERCC1-208ENST00000589165 ALDH5A1P51649 535 aaPredicted RBP16.12■□□□□ 0.17
ERCC1-208ENST00000589165 TRAF1Q13077 416 aa16.12■□□□□ 0.17
ERCC1-208ENST00000589165 RASEFQ8IZ41 740 aa16.12■□□□□ 0.17
ERCC1-208ENST00000589165 DNERQ8NFT8 737 aa16.12■□□□□ 0.17
ERCC1-208ENST00000589165 EPB41L2O43491 1005 aaKnown RBP16.11■□□□□ 0.17
ERCC1-208ENST00000589165 CYTH3O43739 400 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 REC8O95072 547 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 PGK1P00558 417 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 SMARCA1P28370 1054 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 EXOSC10Q01780 885 aaKnown RBP16.11■□□□□ 0.17
ERCC1-208ENST00000589165 LRRC26Q2I0M4 334 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 SGMS1Q86VZ5 419 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 NUP133Q8WUM0 1156 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 LENG1Q96BZ8 264 aaPredicted RBP16.11■□□□□ 0.17
ERCC1-208ENST00000589165 TSEN34Q9BSV6 310 aaKnown RBP16.11■□□□□ 0.17
ERCC1-208ENST00000589165 VTA1Q9NP79 307 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 PHF24Q9UPV7 400 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 FRMPD3Q5JV73 1810 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 SYNRGQ9UMZ2 1314 aa16.11■□□□□ 0.17
ERCC1-208ENST00000589165 CCDC69A6NI79 296 aa16.1■□□□□ 0.17
ERCC1-208ENST00000589165 ADCY6O43306 1168 aa16.1■□□□□ 0.17
ERCC1-208ENST00000589165 PPP1R11O60927 126 aaPredicted RBP16.1■□□□□ 0.17
ERCC1-208ENST00000589165 HMGB1P09429 215 aaKnown RBP16.1■□□□□ 0.17
ERCC1-208ENST00000589165 CALM1P0DP23 149 aa16.1■□□□□ 0.17
ERCC1-208ENST00000589165 CALM2P0DP24 149 aa16.1■□□□□ 0.17
ERCC1-208ENST00000589165 CALM3P0DP25 149 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms