RNA–Protein interactions for RNA: ENST00000525602.1

CLP1-202, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-202ENST00000525602 CHST3Q7LGC8 479 aa14.93□□□□□ -0.02
CLP1-202ENST00000525602 DDX11Q96FC9 970 aa14.93□□□□□ -0.02
CLP1-202ENST00000525602 MUC3AQ02505 3323 aa14.92□□□□□ -0.02
CLP1-202ENST00000525602 ERICH2A1L162 156 aa14.92□□□□□ -0.02
CLP1-202ENST00000525602 IFIT3O14879 490 aaKnown RBP14.92□□□□□ -0.02
CLP1-202ENST00000525602 CNGA1P29973 690 aa14.92□□□□□ -0.02
CLP1-202ENST00000525602 GPR153Q6NV75 609 aa14.92□□□□□ -0.02
CLP1-202ENST00000525602 ANKRD35Q8N283 1001 aa14.92□□□□□ -0.02
CLP1-202ENST00000525602 FAM161BQ96MY7 647 aa14.92□□□□□ -0.02
CLP1-202ENST00000525602 TRERF1Q96PN7 1200 aa14.92□□□□□ -0.02
CLP1-202ENST00000525602 CPVLQ9H3G5 476 aa14.92□□□□□ -0.02
CLP1-202ENST00000525602 A1CFQ9NQ94 594 aaKnown RBP14.92□□□□□ -0.02
CLP1-202ENST00000525602 DDX20Q9UHI6 824 aaKnown RBP14.92□□□□□ -0.02
CLP1-202ENST00000525602 STXBP5LQ9Y2K9 1186 aa14.92□□□□□ -0.02
CLP1-202ENST00000525602 SMCHD1A6NHR9 2005 aa14.92□□□□□ -0.02
CLP1-202ENST00000525602 PARP1P09874 1014 aaKnown RBP14.91□□□□□ -0.02
CLP1-202ENST00000525602 WTAPQ15007 396 aa14.91□□□□□ -0.02
CLP1-202ENST00000525602 SART3Q15020 963 aaKnown RBP14.91□□□□□ -0.02
CLP1-202ENST00000525602 MUM1L1Q5H9M0 696 aa14.91□□□□□ -0.02
CLP1-202ENST00000525602 GUCD1Q96NT3 240 aa14.91□□□□□ -0.02
CLP1-202ENST00000525602 TINF2Q9BSI4 451 aa14.91□□□□□ -0.02
CLP1-202ENST00000525602 UBA5Q9GZZ9 404 aa14.91□□□□□ -0.02
CLP1-202ENST00000525602 SENP2Q9HC62 589 aa14.91□□□□□ -0.02
CLP1-202ENST00000525602 TMEM67Q5HYA8 995 aa14.9□□□□□ -0.02
CLP1-202ENST00000525602 PRAMEF19Q5SWL8 479 aa14.9□□□□□ -0.02
CLP1-202ENST00000525602 GJC2Q5T442 439 aaPredicted RBP14.9□□□□□ -0.02
CLP1-202ENST00000525602 ZNF467Q7Z7K2 595 aaPredicted RBP14.9□□□□□ -0.02
CLP1-202ENST00000525602 MSL3Q8N5Y2 521 aaKnown RBP14.9□□□□□ -0.02
CLP1-202ENST00000525602 FGD4Q96M96 766 aa14.9□□□□□ -0.02
CLP1-202ENST00000525602 WDR19Q8NEZ3 1342 aa14.9□□□□□ -0.02
CLP1-202ENST00000525602 LCTP09848 1927 aa14.9□□□□□ -0.02
CLP1-202ENST00000525602 SYNGAP1Q96PV0 1343 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 POTEB2H3BUK9 544 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 PRC1O43663 620 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 MSCO60682 206 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 RTP1P59025 263 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 COL9A3Q14050 684 aaPredicted RBP14.89□□□□□ -0.03
CLP1-202ENST00000525602 CDC37Q16543 378 aaPredicted RBP14.89□□□□□ -0.03
CLP1-202ENST00000525602 RNF20Q5VTR2 975 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 MAMDC4Q6UXC1 1216 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 ADGRF4Q8IZF3 695 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 STAG2Q8N3U4 1231 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 IGDCC4Q8TDY8 1250 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 NRBP1Q9UHY1 535 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 PNMA2Q9UL42 364 aa14.89□□□□□ -0.03
CLP1-202ENST00000525602 NFIBO00712 420 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 SEPT4O43236 478 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 MYCNP04198 464 aaPredicted RBP14.88□□□□□ -0.03
CLP1-202ENST00000525602 MCM5P33992 734 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 CNTN2Q02246 1040 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 GRM4Q14833 912 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 FAM133AQ8N9E0 248 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 CLEC4DQ8WXI8 215 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 MTA3Q9BTC8 594 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 LY9Q9HBG7 655 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 GPHNQ9NQX3 736 aaPredicted RBP14.88□□□□□ -0.03
CLP1-202ENST00000525602 CYP39A1Q9NYL5 469 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 MAD2L2Q9UI95 211 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 ATP11BQ9Y2G3 1177 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 MCM3APO60318 1980 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 LRRC37A2A6NM11 1700 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 TTC28Q96AY4 2481 aa14.88□□□□□ -0.03
CLP1-202ENST00000525602 PALM3A6NDB9 673 aaPredicted RBP14.87□□□□□ -0.03
CLP1-202ENST00000525602 DNM1LO00429 736 aa14.87□□□□□ -0.03
CLP1-202ENST00000525602 SH2B2O14492 632 aaPredicted RBP14.87□□□□□ -0.03
CLP1-202ENST00000525602 TROAPQ12815 778 aa14.87□□□□□ -0.03
CLP1-202ENST00000525602 NSMFQ6X4W1 530 aa14.87□□□□□ -0.03
CLP1-202ENST00000525602 CATIPQ7Z7H3 387 aa14.87□□□□□ -0.03
CLP1-202ENST00000525602 CNPY2Q9Y2B0 182 aa14.87□□□□□ -0.03
CLP1-202ENST00000525602 MYH6P13533 1939 aa14.87□□□□□ -0.03
CLP1-202ENST00000525602 ASTN1O14525 1302 aa14.87□□□□□ -0.03
CLP1-202ENST00000525602 SOWAHBA6NEL2 793 aa14.86□□□□□ -0.03
CLP1-202ENST00000525602 KLRF2D3W0D1 207 aa14.86□□□□□ -0.03
CLP1-202ENST00000525602 DHX16O60231 1041 aaKnown RBP14.86□□□□□ -0.03
CLP1-202ENST00000525602 SNAI1O95863 264 aaPredicted RBP14.86□□□□□ -0.03
CLP1-202ENST00000525602 ZNF865P0CJ78 1059 aaPredicted RBP14.86□□□□□ -0.03
CLP1-202ENST00000525602 QRICH1Q2TAL8 776 aa14.86□□□□□ -0.03
CLP1-202ENST00000525602 USH1GQ495M9 461 aa14.86□□□□□ -0.03
CLP1-202ENST00000525602 C9orf50Q5SZB4 431 aa14.86□□□□□ -0.03
CLP1-202ENST00000525602 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
CLP1-202ENST00000525602 TMEM87BQ96K49 555 aa14.86□□□□□ -0.03
CLP1-202ENST00000525602 LBHD1Q9BQE6 289 aaPredicted RBP14.86□□□□□ -0.03
CLP1-202ENST00000525602 JMJD4Q9H9V9 463 aa14.86□□□□□ -0.03
CLP1-202ENST00000525602 PRDM5Q9NQX1 630 aaPredicted RBP14.86□□□□□ -0.03
CLP1-202ENST00000525602 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.86□□□□□ -0.03
CLP1-202ENST00000525602 DDAH1O94760 285 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 SLC35G1Q2M3R5 365 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 TSGA10IPQ3SY00 556 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 TRIM60Q495X7 471 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 SLC30A10Q6XR72 485 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 ARMCX2Q7L311 632 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 CCDC144CPQ8IYA2 1237 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 ZNF654Q8IZM8 581 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 FERMT2Q96AC1 680 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 COL25A1Q9BXS0 654 aaPredicted RBP14.85□□□□□ -0.03
CLP1-202ENST00000525602 LRRC2Q9BYS8 371 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 VAT1LQ9HCJ6 419 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 ZHX1Q9UKY1 873 aaPredicted RBP14.85□□□□□ -0.03
CLP1-202ENST00000525602 ABCB11O95342 1321 aa14.85□□□□□ -0.03
CLP1-202ENST00000525602 REC8O95072 547 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms