RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 NFIBO00712 420 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 ADCY6O43306 1168 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 SNHG28P0DPA3 235 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 MAGEA10P43363 369 aaPredicted RBP17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 IRX5P78411 483 aaPredicted RBP17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 CCDC144BQ3MJ40 725 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 SLC39A5Q6ZMH5 540 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 CYB5R4Q7L1T6 521 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 RNF180Q86T96 592 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 CNNM2Q9H8M5 875 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 CYP39A1Q9NYL5 469 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 ASTN1O14525 1302 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 SYNRGQ9UMZ2 1314 aa17.36■□□□□ 0.37
UBE2D3-228ENST00000508974 LTBP2Q14767 1821 aa17.35■□□□□ 0.37
UBE2D3-228ENST00000508974 PTPDC1A2A3K4 754 aa17.35■□□□□ 0.37
UBE2D3-228ENST00000508974 MDM2Q00987 491 aaPredicted RBP17.35■□□□□ 0.37
UBE2D3-228ENST00000508974 USH1GQ495M9 461 aa17.35■□□□□ 0.37
UBE2D3-228ENST00000508974 TRIM60Q495X7 471 aa17.35■□□□□ 0.37
UBE2D3-228ENST00000508974 CCDC178Q5BJE1 867 aa17.35■□□□□ 0.37
UBE2D3-228ENST00000508974 EEPD1Q7L9B9 569 aa17.35■□□□□ 0.37
UBE2D3-228ENST00000508974 ABHD16BQ9H3Z7 469 aa17.35■□□□□ 0.37
UBE2D3-228ENST00000508974 TAF6LQ9Y6J9 622 aa17.35■□□□□ 0.37
UBE2D3-228ENST00000508974 MYADML2A6NDP7 307 aa17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 SGSM2O43147 1006 aa17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 DHX16O60231 1041 aaKnown RBP17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 ADAMTS4O75173 837 aa17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 CYP21A2P08686 494 aa17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 BAATQ14032 418 aaPredicted RBP17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 GPATCH4Q5T3I0 446 aaKnown RBP17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 IFIT1BQ5T764 474 aaKnown RBP17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 SLC30A10Q6XR72 485 aa17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 GDF15Q99988 308 aa17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 PRDM5Q9NQX1 630 aaPredicted RBP17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 PHF24Q9UPV7 400 aa17.34■□□□□ 0.37
UBE2D3-228ENST00000508974 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 A0A1W2PQ45 241 aaPredicted RBP17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 A0A1W2PQY0 241 aa17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 C6orf222P0C671 652 aaPredicted RBP17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 CALML3P27482 149 aa17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 TRDNQ13061 729 aa17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 NOL8Q76FK4 1167 aaKnown RBP17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 CHST3Q7LGC8 479 aa17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 FBXO16Q8IX29 292 aaPredicted RBP17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 KATNBL1Q9H079 304 aa17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 VAT1LQ9HCJ6 419 aa17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 SZT2Q5T011 3432 aa17.33■□□□□ 0.36
UBE2D3-228ENST00000508974 ASB14A6NK59 587 aa17.32■□□□□ 0.36
UBE2D3-228ENST00000508974 PARP1P09874 1014 aaKnown RBP17.32■□□□□ 0.36
UBE2D3-228ENST00000508974 PTGS1P23219 599 aa17.32■□□□□ 0.36
UBE2D3-228ENST00000508974 NT5C2P49902 561 aa17.32■□□□□ 0.36
UBE2D3-228ENST00000508974 CDC37Q16543 378 aaPredicted RBP17.32■□□□□ 0.36
UBE2D3-228ENST00000508974 ADGRF4Q8IZF3 695 aa17.32■□□□□ 0.36
UBE2D3-228ENST00000508974 ANKS1AQ92625 1134 aa17.32■□□□□ 0.36
UBE2D3-228ENST00000508974 UBE2OQ9C0C9 1292 aaKnown RBP17.32■□□□□ 0.36
UBE2D3-228ENST00000508974 PRKAG2Q9UGJ0 569 aa17.32■□□□□ 0.36
UBE2D3-228ENST00000508974 E7EWF7 191 aa17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 DUSP11O75319 330 aaKnown RBP17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 ACLYP53396 1101 aa17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 KCNA10Q16322 511 aa17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 ASPRV1Q53RT3 343 aa17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 RNF207Q6ZRF8 634 aa17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 STOX1Q6ZVD7 989 aa17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 CENPQQ7L2Z9 268 aaPredicted RBP17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 RALYLQ86SE5 291 aaKnown RBP17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 CLEC4DQ8WXI8 215 aa17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 PDGFCQ9NRA1 345 aa17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 RBM8AQ9Y5S9 174 aaKnown RBP17.31■□□□□ 0.36
UBE2D3-228ENST00000508974 SOX1O00570 391 aaPredicted RBP17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 IFIT3O14879 490 aaKnown RBP17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 ALDH5A1P51649 535 aaPredicted RBP17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 BEX3Q00994 111 aa17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 TNFAIP2Q03169 654 aa17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 MKRN4PQ13434 485 aaPredicted RBP17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 SEC23AQ15436 765 aa17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 STAG2Q8N3U4 1231 aa17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 LBHD1Q9BQE6 289 aaPredicted RBP17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 SPC25Q9HBM1 224 aa17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 SENP2Q9HC62 589 aa17.3■□□□□ 0.36
UBE2D3-228ENST00000508974 LAMA3Q16787 3333 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 WDR19Q8NEZ3 1342 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 PQBP1O60828 265 aaKnown RBP17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 BMP8BP34820 402 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 TLE2Q04725 743 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 SNX17Q15036 470 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 QRICH1Q2TAL8 776 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 TMEM63BQ5T3F8 832 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 KIAA1211Q6ZU35 1233 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 SH3RF1Q7Z6J0 888 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 KLHDC9Q8NEP7 349 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 NCOA7Q8NI08 942 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 MAP4K1Q92918 833 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 VTI1AQ96AJ9 217 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 LRCH3Q96II8 777 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 STARD7Q9NQZ5 370 aa17.29■□□□□ 0.36
UBE2D3-228ENST00000508974 A0A1W2PPC1 479 aa17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 ERICH2A1L162 156 aa17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 ASGR1P07306 291 aa17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 SMPD1P17405 629 aa17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 GJA9P57773 515 aa17.28■□□□□ 0.36
UBE2D3-228ENST00000508974 RPS6P62753 249 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms