RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 ERICH2A1L162 156 aa29.26■■■□□ 2.27
HTATSF1-203ENST00000448450 ANTXR2P58335 489 aa29.26■■■□□ 2.27
HTATSF1-203ENST00000448450 GPATCH4Q5T3I0 446 aaKnown RBP29.26■■■□□ 2.27
HTATSF1-203ENST00000448450 SLC39A5Q6ZMH5 540 aa29.26■■■□□ 2.27
HTATSF1-203ENST00000448450 ANKRD35Q8N283 1001 aa29.26■■■□□ 2.27
HTATSF1-203ENST00000448450 RANBP17Q9H2T7 1088 aaKnown RBP29.26■■■□□ 2.27
HTATSF1-203ENST00000448450 RNF146Q9NTX7 359 aa29.26■■■□□ 2.27
HTATSF1-203ENST00000448450 CCPG1Q9ULG6 757 aa29.26■■■□□ 2.27
HTATSF1-203ENST00000448450 WTAPQ15007 396 aa29.25■■■□□ 2.27
HTATSF1-203ENST00000448450 SART3Q15020 963 aaKnown RBP29.25■■■□□ 2.27
HTATSF1-203ENST00000448450 TMEM67Q5HYA8 995 aa29.25■■■□□ 2.27
HTATSF1-203ENST00000448450 MAML3Q96JK9 1138 aa29.25■■■□□ 2.27
HTATSF1-203ENST00000448450 GUCD1Q96NT3 240 aa29.25■■■□□ 2.27
HTATSF1-203ENST00000448450 TRERF1Q96PN7 1200 aa29.25■■■□□ 2.27
HTATSF1-203ENST00000448450 PRDM5Q9NQX1 630 aaPredicted RBP29.25■■■□□ 2.27
HTATSF1-203ENST00000448450 FBXO40Q9UH90 709 aa29.25■■■□□ 2.27
HTATSF1-203ENST00000448450 SMCHD1A6NHR9 2005 aa29.25■■■□□ 2.27
HTATSF1-203ENST00000448450 PARP1P09874 1014 aaKnown RBP29.24■■■□□ 2.27
HTATSF1-203ENST00000448450 ZNF792Q3KQV3 632 aa29.24■■■□□ 2.27
HTATSF1-203ENST00000448450 ZNF697Q5TEC3 545 aa29.24■■■□□ 2.27
HTATSF1-203ENST00000448450 ACAD9Q9H845 621 aa29.24■■■□□ 2.27
HTATSF1-203ENST00000448450 EYSQ5T1H1 3165 aa29.23■■■□□ 2.27
HTATSF1-203ENST00000448450 COL9A3Q14050 684 aaPredicted RBP29.23■■■□□ 2.27
HTATSF1-203ENST00000448450 RNF20Q5VTR2 975 aa29.23■■■□□ 2.27
HTATSF1-203ENST00000448450 FAM161BQ96MY7 647 aa29.23■■■□□ 2.27
HTATSF1-203ENST00000448450 GPHNQ9NQX3 736 aaPredicted RBP29.23■■■□□ 2.27
HTATSF1-203ENST00000448450 PLXNA1Q9UIW2 1896 aa29.23■■■□□ 2.27
HTATSF1-203ENST00000448450 PRC1O43663 620 aa29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 ICAM1P05362 532 aa29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 SNX17Q15036 470 aa29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 TKFCQ3LXA3 575 aa29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 TRIM60Q495X7 471 aa29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 ASPRV1Q53RT3 343 aa29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 MUM1L1Q5H9M0 696 aa29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 PRAMEF19Q5SWL8 479 aa29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 PHF6Q8IWS0 365 aaKnown RBP eCLIP29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 IGDCC4Q8TDY8 1250 aa29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 VAT1LQ9HCJ6 419 aa29.22■■■□□ 2.27
HTATSF1-203ENST00000448450 MCM5P33992 734 aa29.21■■■□□ 2.27
HTATSF1-203ENST00000448450 ADCYAP1R1P41586 468 aa29.21■■■□□ 2.27
HTATSF1-203ENST00000448450 STAG2Q8N3U4 1231 aa29.21■■■□□ 2.27
HTATSF1-203ENST00000448450 DIS3Q9Y2L1 958 aaKnown RBP29.21■■■□□ 2.27
HTATSF1-203ENST00000448450 DNAJC25-GNG10A0A024R161 153 aa29.2■■■□□ 2.26
HTATSF1-203ENST00000448450 DHX16O60231 1041 aaKnown RBP29.2■■■□□ 2.26
HTATSF1-203ENST00000448450 LRRC41Q15345 812 aa29.2■■■□□ 2.26
HTATSF1-203ENST00000448450 RASEFQ8IZ41 740 aa29.2■■■□□ 2.26
HTATSF1-203ENST00000448450 SHHQ15465 462 aa29.19■■■□□ 2.26
HTATSF1-203ENST00000448450 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.19■■■□□ 2.26
HTATSF1-203ENST00000448450 ADGRF4Q8IZF3 695 aa29.19■■■□□ 2.26
HTATSF1-203ENST00000448450 FERMT2Q96AC1 680 aa29.19■■■□□ 2.26
HTATSF1-203ENST00000448450 TINF2Q9BSI4 451 aa29.19■■■□□ 2.26
HTATSF1-203ENST00000448450 A1CFQ9NQ94 594 aaKnown RBP29.19■■■□□ 2.26
HTATSF1-203ENST00000448450 PDLIM7Q9NR12 457 aa29.19■■■□□ 2.26
HTATSF1-203ENST00000448450 NRBP1Q9UHY1 535 aa29.19■■■□□ 2.26
HTATSF1-203ENST00000448450 C1orf53Q5VUE5 145 aa29.18■■■□□ 2.26
HTATSF1-203ENST00000448450 NSMFQ6X4W1 530 aa29.18■■■□□ 2.26
HTATSF1-203ENST00000448450 BADQ92934 168 aa29.18■■■□□ 2.26
HTATSF1-203ENST00000448450 LRRC2Q9BYS8 371 aa29.18■■■□□ 2.26
HTATSF1-203ENST00000448450 RARBP10826 455 aa29.17■■■□□ 2.26
HTATSF1-203ENST00000448450 CNTN2Q02246 1040 aa29.17■■■□□ 2.26
HTATSF1-203ENST00000448450 C9orf50Q5SZB4 431 aa29.17■■■□□ 2.26
HTATSF1-203ENST00000448450 CATIPQ7Z7H3 387 aa29.17■■■□□ 2.26
HTATSF1-203ENST00000448450 LY9Q9HBG7 655 aa29.17■■■□□ 2.26
HTATSF1-203ENST00000448450 XPNPEP3Q9NQH7 507 aa29.17■■■□□ 2.26
HTATSF1-203ENST00000448450 MAD2L2Q9UI95 211 aa29.17■■■□□ 2.26
HTATSF1-203ENST00000448450 KLRF2D3W0D1 207 aa29.16■■■□□ 2.26
HTATSF1-203ENST00000448450 GRM4Q14833 912 aa29.16■■■□□ 2.26
HTATSF1-203ENST00000448450 CDC37Q16543 378 aaPredicted RBP29.16■■■□□ 2.26
HTATSF1-203ENST00000448450 USH1GQ495M9 461 aa29.16■■■□□ 2.26
HTATSF1-203ENST00000448450 NUP133Q8WUM0 1156 aa29.16■■■□□ 2.26
HTATSF1-203ENST00000448450 NEK1Q96PY6 1258 aa29.16■■■□□ 2.26
HTATSF1-203ENST00000448450 JMJD4Q9H9V9 463 aa29.16■■■□□ 2.26
HTATSF1-203ENST00000448450 PALM3A6NDB9 673 aaPredicted RBP29.15■■■□□ 2.26
HTATSF1-203ENST00000448450 ADCK5Q3MIX3 580 aa29.15■■■□□ 2.26
HTATSF1-203ENST00000448450 NFXL1Q6ZNB6 911 aa29.15■■■□□ 2.26
HTATSF1-203ENST00000448450 TMEM87BQ96K49 555 aa29.15■■■□□ 2.26
HTATSF1-203ENST00000448450 MYL10Q9BUA6 226 aa29.15■■■□□ 2.26
HTATSF1-203ENST00000448450 COL25A1Q9BXS0 654 aaPredicted RBP29.15■■■□□ 2.26
HTATSF1-203ENST00000448450 PHF24Q9UPV7 400 aa29.15■■■□□ 2.26
HTATSF1-203ENST00000448450 PRUNE2Q8WUY3 3088 aa29.15■■■□□ 2.26
HTATSF1-203ENST00000448450 VCANP13611 3396 aa29.14■■■□□ 2.26
HTATSF1-203ENST00000448450 NFIBO00712 420 aa29.14■■■□□ 2.26
HTATSF1-203ENST00000448450 SH2B2O14492 632 aaPredicted RBP29.14■■■□□ 2.26
HTATSF1-203ENST00000448450 REC8O95072 547 aa29.14■■■□□ 2.26
HTATSF1-203ENST00000448450 TROAPQ12815 778 aa29.14■■■□□ 2.26
HTATSF1-203ENST00000448450 RNF180Q86T96 592 aa29.14■■■□□ 2.26
HTATSF1-203ENST00000448450 FGD4Q96M96 766 aa29.14■■■□□ 2.26
HTATSF1-203ENST00000448450 CDH23Q9H251 3354 aa29.14■■■□□ 2.26
HTATSF1-203ENST00000448450 TRIM43BA6NCK2 446 aa29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 TLE2Q04725 743 aa29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 QRICH1Q2TAL8 776 aa29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 TSGA10IPQ3SY00 556 aa29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 SH3RF1Q7Z6J0 888 aa29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 ZNF654Q8IZM8 581 aa29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 FAM133AQ8N9E0 248 aa29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 TRIM43Q96BQ3 446 aaPredicted RBP29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 MTA3Q9BTC8 594 aa29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 CYP39A1Q9NYL5 469 aa29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 PNMA2Q9UL42 364 aa29.13■■■□□ 2.25
HTATSF1-203ENST00000448450 SOWAHBA6NEL2 793 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms