RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 TMEM60Q9H2L4 133 aa20.87■□□□□ 0.93
CNIH3-201ENST00000272133 COL1A1P02452 1464 aaPredicted RBP20.87■□□□□ 0.93
CNIH3-201ENST00000272133 VAV2P52735 878 aa20.86■□□□□ 0.93
CNIH3-201ENST00000272133 BLIDQ8IZY5 108 aa20.86■□□□□ 0.93
CNIH3-201ENST00000272133 BRIP1Q9BX63 1249 aa20.86■□□□□ 0.93
CNIH3-201ENST00000272133 SNX12Q9UMY4 172 aa20.86■□□□□ 0.93
CNIH3-201ENST00000272133 DLEC1Q9Y238 1755 aa20.86■□□□□ 0.93
CNIH3-201ENST00000272133 NUTM2BA6NNL0 878 aaPredicted RBP20.86■□□□□ 0.93
CNIH3-201ENST00000272133 NUTM2EB1AL46 878 aaPredicted RBP20.86■□□□□ 0.93
CNIH3-201ENST00000272133 FGRP09769 529 aa20.86■□□□□ 0.93
CNIH3-201ENST00000272133 GTF2A1P52655 376 aaPredicted RBP20.86■□□□□ 0.93
CNIH3-201ENST00000272133 CCDC96Q2M329 555 aa20.86■□□□□ 0.93
CNIH3-201ENST00000272133 DTHD1Q6ZMT9 781 aa20.86■□□□□ 0.93
CNIH3-201ENST00000272133 ZNF384Q8TF68 577 aa20.86■□□□□ 0.93
CNIH3-201ENST00000272133 CNOT6LQ96LI5 555 aaKnown RBP20.86■□□□□ 0.93
CNIH3-201ENST00000272133 AHDC1Q5TGY3 1603 aaPredicted RBP20.85■□□□□ 0.93
CNIH3-201ENST00000272133 CACNA1SQ13698 1873 aa20.85■□□□□ 0.93
CNIH3-201ENST00000272133 EXOC5O00471 708 aa20.85■□□□□ 0.93
CNIH3-201ENST00000272133 IQCEQ6IPM2 695 aa20.85■□□□□ 0.93
CNIH3-201ENST00000272133 PSMB7Q99436 277 aa20.85■□□□□ 0.93
CNIH3-201ENST00000272133 COL22A1Q8NFW1 1626 aaPredicted RBP20.85■□□□□ 0.93
CNIH3-201ENST00000272133 MATR3P43243 847 aaKnown RBP eCLIP20.85■□□□□ 0.93
CNIH3-201ENST00000272133 SLC7A5Q01650 507 aa20.85■□□□□ 0.93
CNIH3-201ENST00000272133 NUP58Q9BVL2 599 aa20.85■□□□□ 0.93
CNIH3-201ENST00000272133 MLXIPQ9HAP2 919 aa20.85■□□□□ 0.93
CNIH3-201ENST00000272133 KBTBD4Q9NVX7 518 aa20.85■□□□□ 0.93
CNIH3-201ENST00000272133 SMARCAL1Q9NZC9 954 aa20.85■□□□□ 0.93
CNIH3-201ENST00000272133 UBA7P41226 1012 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 CCDC152Q4G0S7 254 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 MIIPQ5JXC2 388 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 TTC19Q6DKK2 380 aaPredicted RBP20.84■□□□□ 0.93
CNIH3-201ENST00000272133 GPIHBP1Q8IV16 184 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 MICALL1Q8N3F8 863 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 FNBP4Q8N3X1 1017 aaPredicted RBP20.84■□□□□ 0.93
CNIH3-201ENST00000272133 RETREG2Q8NC44 543 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 CCDC42Q96M95 316 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 ANKRD40Q6AI12 368 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 CCDC70Q6NSX1 233 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 TYW1BQ6NUM6 668 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 NOC4LQ9BVI4 516 aaKnown RBP20.84■□□□□ 0.93
CNIH3-201ENST00000272133 CAPS2Q9BXY5 557 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 EHD2Q9NZN4 543 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.84■□□□□ 0.93
CNIH3-201ENST00000272133 LTBP4Q8N2S1 1624 aa20.84■□□□□ 0.93
CNIH3-201ENST00000272133 COL4A1P02462 1669 aa20.83■□□□□ 0.93
CNIH3-201ENST00000272133 GRIN2DO15399 1336 aa20.83■□□□□ 0.93
CNIH3-201ENST00000272133 CPP00450 1065 aa20.83■□□□□ 0.93
CNIH3-201ENST00000272133 CXCR5P32302 372 aa20.83■□□□□ 0.93
CNIH3-201ENST00000272133 IL6STP40189 918 aaPredicted RBP20.83■□□□□ 0.93
CNIH3-201ENST00000272133 MTIF2P46199 727 aaKnown RBP20.83■□□□□ 0.93
CNIH3-201ENST00000272133 PPFIA1Q13136 1202 aa20.83■□□□□ 0.93
CNIH3-201ENST00000272133 AMOTL1Q8IY63 956 aa20.83■□□□□ 0.93
CNIH3-201ENST00000272133 MMGT1Q8N4V1 131 aa20.83■□□□□ 0.93
CNIH3-201ENST00000272133 ZNF804BA4D1E1 1349 aa20.83■□□□□ 0.92
CNIH3-201ENST00000272133 A0A087WUV0 522 aaPredicted RBP20.83■□□□□ 0.92
CNIH3-201ENST00000272133 MOCS3O95396 460 aa20.83■□□□□ 0.92
CNIH3-201ENST00000272133 CALML3P27482 149 aa20.83■□□□□ 0.92
CNIH3-201ENST00000272133 SPA17Q15506 151 aa20.83■□□□□ 0.92
CNIH3-201ENST00000272133 SPATA4Q8NEY3 305 aa20.83■□□□□ 0.92
CNIH3-201ENST00000272133 TRIM58Q8NG06 486 aa20.83■□□□□ 0.92
CNIH3-201ENST00000272133 BCAS4Q8TDM0 211 aa20.83■□□□□ 0.92
CNIH3-201ENST00000272133 P2RX5Q93086 422 aa20.83■□□□□ 0.92
CNIH3-201ENST00000272133 PCDHA4Q9UN74 947 aa20.83■□□□□ 0.92
CNIH3-201ENST00000272133 MYH10P35580 1976 aa20.82■□□□□ 0.92
CNIH3-201ENST00000272133 STK4Q13043 487 aa20.82■□□□□ 0.92
CNIH3-201ENST00000272133 CCDC178Q5BJE1 867 aa20.82■□□□□ 0.92
CNIH3-201ENST00000272133 NFRKBQ6P4R8 1299 aa20.82■□□□□ 0.92
CNIH3-201ENST00000272133 NOC3LQ8WTT2 800 aaKnown RBP20.82■□□□□ 0.92
CNIH3-201ENST00000272133 DHTKD1Q96HY7 919 aaPredicted RBP20.82■□□□□ 0.92
CNIH3-201ENST00000272133 IFIH1Q9BYX4 1025 aaKnown RBP20.82■□□□□ 0.92
CNIH3-201ENST00000272133 TSGA10Q9BZW7 698 aa20.82■□□□□ 0.92
CNIH3-201ENST00000272133 PCP11498 1178 aaKnown RBP20.82■□□□□ 0.92
CNIH3-201ENST00000272133 LIG3P49916 1009 aa20.82■□□□□ 0.92
CNIH3-201ENST00000272133 GNGT1P63211 74 aa20.82■□□□□ 0.92
CNIH3-201ENST00000272133 INF2Q27J81 1249 aa20.82■□□□□ 0.92
CNIH3-201ENST00000272133 SLC4A8Q2Y0W8 1093 aa20.82■□□□□ 0.92
CNIH3-201ENST00000272133 SH2D4AQ9H788 454 aa20.82■□□□□ 0.92
CNIH3-201ENST00000272133 CCDC194A0A1B0GVG4 234 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 CYP2D6P10635 497 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 FCER1AP12319 257 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 CCNE1P24864 410 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 PDE4DQ08499 809 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 TSEN2Q8NCE0 465 aaKnown RBP20.81■□□□□ 0.92
CNIH3-201ENST00000272133 ARHGAP20Q9P2F6 1191 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 FAM169AQ9Y6X4 670 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 EBAG9O00559 213 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 EPHB6O15197 1021 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 TACC1O75410 805 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 FKBP15Q5T1M5 1219 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 C2CD5Q86YS7 1000 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 SH3GL2Q99962 352 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 PCDHA13Q9Y5I0 950 aa20.81■□□□□ 0.92
CNIH3-201ENST00000272133 BCL9O00512 1426 aa20.8■□□□□ 0.92
CNIH3-201ENST00000272133 EIF3HO15372 352 aaKnown RBP eCLIP20.8■□□□□ 0.92
CNIH3-201ENST00000272133 MYL1P05976 194 aa20.8■□□□□ 0.92
CNIH3-201ENST00000272133 PLCG1P19174 1290 aa20.8■□□□□ 0.92
CNIH3-201ENST00000272133 ANKRD18AQ8IVF6 992 aa20.8■□□□□ 0.92
CNIH3-201ENST00000272133 STAG2Q8N3U4 1231 aa20.8■□□□□ 0.92
CNIH3-201ENST00000272133 HPS3Q969F9 1004 aa20.8■□□□□ 0.92
CNIH3-201ENST00000272133 OSBPL9Q96SU4 736 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms