RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 LHS1P36016 881 aa-0.26□□□□□ -2.45
snR47snR47 OSH3P38713 996 aaKnown RBP-0.26□□□□□ -2.45
snR47snR47 MRX1P40050 688 aa-0.26□□□□□ -2.45
snR47snR47 RIC1P40395 1056 aa-0.26□□□□□ -2.45
snR47snR47 PIN3Q06449 215 aa-0.26□□□□□ -2.45
snR47snR47 ATG23Q06671 453 aa-0.26□□□□□ -2.45
snR47snR47 PLB3Q08108 686 aa-0.26□□□□□ -2.45
snR47snR47 SSP2Q08646 371 aa-0.26□□□□□ -2.45
snR47snR47 SLF1Q12034 447 aaKnown RBP-0.26□□□□□ -2.45
snR47snR47 VAS1P07806 1104 aaKnown RBP-0.27□□□□□ -2.45
snR47snR47 YML003WP0CF16 290 aa-0.27□□□□□ -2.45
snR47snR47 APE1P14904 514 aa-0.27□□□□□ -2.45
snR47snR47 AAP1P37898 856 aaKnown RBP-0.27□□□□□ -2.45
snR47snR47 MSG5P38590 489 aa-0.27□□□□□ -2.45
snR47snR47 CPR7P47103 393 aa-0.27□□□□□ -2.45
snR47snR47 CRH1P53301 507 aa-0.27□□□□□ -2.45
snR47snR47 RHO4Q00246 291 aa-0.27□□□□□ -2.45
snR47snR47 MRPL51Q06090 140 aaPredicted RBP-0.27□□□□□ -2.45
snR47snR47 SWA2Q06677 668 aa-0.27□□□□□ -2.45
snR47snR47 YTM1Q12024 460 aaPredicted RBP-0.27□□□□□ -2.45
snR47snR47 ADE3P07245 946 aaKnown RBP-0.28□□□□□ -2.45
snR47snR47 CBP6P07253 162 aaPredicted RBP-0.28□□□□□ -2.45
snR47snR47 MCM3P24279 971 aaKnown RBP-0.28□□□□□ -2.45
snR47snR47 DPH2P32461 534 aa-0.28□□□□□ -2.45
snR47snR47 LAG1P38703 411 aa-0.28□□□□□ -2.45
snR47snR47 STL1P39932 569 aa-0.28□□□□□ -2.45
snR47snR47 DLD2P46681 530 aaKnown RBP-0.28□□□□□ -2.45
snR47snR47 YGR018CP53211 109 aa-0.28□□□□□ -2.45
snR47snR47 SDA1P53313 767 aaKnown RBP-0.28□□□□□ -2.45
snR47snR47 CAF40P53829 373 aa-0.28□□□□□ -2.45
snR47snR47 YVH1Q02256 364 aaKnown RBP-0.28□□□□□ -2.45
snR47snR47 CRD1Q07560 283 aa-0.28□□□□□ -2.45
snR47snR47 CWC2Q12046 339 aaPredicted RBP-0.28□□□□□ -2.45
snR47snR47 THP3Q12049 470 aaKnown RBP-0.28□□□□□ -2.45
snR47snR47 YLR108CQ12259 485 aa-0.28□□□□□ -2.45
snR47snR47 ADH1P00330 348 aaKnown RBP-0.29□□□□□ -2.46
snR47snR47 RPS8AP0CX39 200 aaKnown RBP-0.29□□□□□ -2.46
snR47snR47 RPS8BP0CX40 200 aaKnown RBP-0.29□□□□□ -2.46
snR47snR47 SMY1P32364 656 aaKnown RBP-0.29□□□□□ -2.46
snR47snR47 ARP2P32381 391 aaKnown RBP-0.29□□□□□ -2.46
snR47snR47 AGA2P32781 87 aa-0.29□□□□□ -2.46
snR47snR47 SOF1P33750 489 aaKnown RBP-0.29□□□□□ -2.46
snR47snR47 ELO1P39540 310 aa-0.29□□□□□ -2.46
snR47snR47 ECM10P39987 644 aa-0.29□□□□□ -2.46
snR47snR47 NUP82P40368 713 aa-0.29□□□□□ -2.46
snR47snR47 CTF18P49956 741 aa-0.29□□□□□ -2.46
snR47snR47 TFB2Q02939 513 aa-0.29□□□□□ -2.46
snR47snR47 MTQ2Q03920 221 aaPredicted RBP-0.29□□□□□ -2.46
snR47snR47 GLO2Q05584 274 aa-0.29□□□□□ -2.46
snR47snR47 VPS74Q06385 345 aa-0.29□□□□□ -2.46
snR47snR47 SNF3P10870 884 aa-0.3□□□□□ -2.46
snR47snR47 PGS1P25578 521 aa-0.3□□□□□ -2.46
snR47snR47 THI4P32318 326 aa-0.3□□□□□ -2.46
snR47snR47 UTR5P32630 166 aa-0.3□□□□□ -2.46
snR47snR47 HEL1P36113 551 aa-0.3□□□□□ -2.46
snR47snR47 GEX2P36173 615 aa-0.3□□□□□ -2.46
snR47snR47 MRPL10P36520 322 aa-0.3□□□□□ -2.46
snR47snR47 ATG12P38316 186 aa-0.3□□□□□ -2.46
snR47snR47 YLF2P38746 405 aa-0.3□□□□□ -2.46
snR47snR47 YER186CP40101 306 aa-0.3□□□□□ -2.46
snR47snR47 BUD6P41697 788 aa-0.3□□□□□ -2.46
snR47snR47 YFR020WP43600 232 aa-0.3□□□□□ -2.46
snR47snR47 PYK2P52489 506 aaKnown RBP-0.3□□□□□ -2.46
snR47snR47 MKC7P53379 596 aa-0.3□□□□□ -2.46
snR47snR47 YPL108WQ02872 168 aaPredicted RBP-0.3□□□□□ -2.46
snR47snR47 RPN4Q03465 531 aa-0.3□□□□□ -2.46
snR47snR47 HER2Q03557 464 aa-0.3□□□□□ -2.46
snR47snR47 YOL057WQ08225 711 aa-0.3□□□□□ -2.46
snR47snR47 RRD2Q12461 358 aa-0.3□□□□□ -2.46
snR47snR47 NTR2P36118 322 aaPredicted RBP-0.31□□□□□ -2.46
snR47snR47 NAT2P37293 288 aa-0.31□□□□□ -2.46
snR47snR47 PRM5P40476 318 aa-0.31□□□□□ -2.46
snR47snR47 SCD6P45978 349 aaKnown RBP RIP-Chip data-0.31□□□□□ -2.46not detected
snR47snR47 YJL144WP47009 104 aa-0.31□□□□□ -2.46
snR47snR47 BAT2P47176 376 aaKnown RBP-0.31□□□□□ -2.46
snR47snR47 IBD2P53892 351 aa-0.31□□□□□ -2.46
snR47snR47 MTG1Q03151 367 aaPredicted RBP-0.31□□□□□ -2.46
snR47snR47 YMR160WQ03823 816 aa-0.31□□□□□ -2.46
snR47snR47 ICL2Q12031 575 aa-0.31□□□□□ -2.46
snR47snR47 SCH9P11792 824 aaKnown RBP-0.32□□□□□ -2.46
snR47snR47 ART10P18634 518 aaKnown RBP-0.32□□□□□ -2.46
snR47snR47 HEM12P32347 362 aaPredicted RBP-0.32□□□□□ -2.46
snR47snR47 SCC4P40090 624 aa-0.32□□□□□ -2.46
snR47snR47 WWM1P43582 211 aaKnown RBP-0.32□□□□□ -2.46
snR47snR47 GWT1P47026 490 aa-0.32□□□□□ -2.46
snR47snR47 PUS4P48567 403 aaKnown RBP-0.32□□□□□ -2.46
snR47snR47 YGR237CP50089 785 aa-0.32□□□□□ -2.46
snR47snR47 ALT2P52892 507 aa-0.32□□□□□ -2.46
snR47snR47 PIR3Q03180 325 aa-0.32□□□□□ -2.46
snR47snR47 RSM28Q03430 361 aa-0.32□□□□□ -2.46
snR47snR47 IRC25Q07951 179 aa-0.32□□□□□ -2.46
snR47snR47 DNL4Q08387 944 aaPredicted RBP-0.32□□□□□ -2.46
snR47snR47 YPR027CQ12079 277 aa-0.32□□□□□ -2.46
snR47snR47 YEF3P16521 1044 aaKnown RBP-0.33□□□□□ -2.46
snR47snR47 FRE1P32791 686 aa-0.33□□□□□ -2.46
snR47snR47 NPL6P32832 435 aa-0.33□□□□□ -2.46
snR47snR47 GAT2P40209 560 aa-0.33□□□□□ -2.46
snR47snR47 DFG10P40526 253 aa-0.33□□□□□ -2.46
snR47snR47 SWP82P43554 623 aa-0.33□□□□□ -2.46
snR47snR47 RRT5P43607 289 aa-0.33□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms