RNA–Protein interactions for RNA: YPL045W

VPS16, Transcript of Subunit of the HOPS and the CORVET complexes, yeastyeast

Gene VPS16, Length 2,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS16YPL045W HXT3P32466 567 aaKnown RBP2.38□□□□□ -2.03
VPS16YPL045W SWH1P35845 1188 aa2.38□□□□□ -2.03
VPS16YPL045W UIP5P36137 443 aa2.38□□□□□ -2.03
VPS16YPL045W FTH1P38310 465 aa2.38□□□□□ -2.03
VPS16YPL045W DIA4P38705 446 aaPredicted RBP2.38□□□□□ -2.03
VPS16YPL045W NAS2P40555 220 aa2.38□□□□□ -2.03
VPS16YPL045W DPB11P47027 764 aaPredicted RBP2.38□□□□□ -2.03
VPS16YPL045W ECL1P48235 211 aa2.38□□□□□ -2.03
VPS16YPL045W MNN10P50108 393 aaKnown RBP2.38□□□□□ -2.03
VPS16YPL045W ATG4P53867 494 aa2.38□□□□□ -2.03
VPS16YPL045W EOS1P53938 366 aa2.38□□□□□ -2.03
VPS16YPL045W EFM6P53970 246 aa2.38□□□□□ -2.03
VPS16YPL045W FIN1Q03898 291 aa2.38□□□□□ -2.03
VPS16YPL045W LCB4Q12246 624 aa2.38□□□□□ -2.03
VPS16YPL045W SEC39Q12745 709 aa2.38□□□□□ -2.03
VPS16YPL045W NUP170P38181 1502 aa2.37□□□□□ -2.03
VPS16YPL045W CHC1P22137 1653 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W TY1B-AO13527 1196 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W HXK2P04807 486 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W ALG7P07286 448 aa2.37□□□□□ -2.03
VPS16YPL045W CLC1P17891 233 aa2.37□□□□□ -2.03
VPS16YPL045W RNR3P21672 869 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W APN1P22936 367 aa2.37□□□□□ -2.03
VPS16YPL045W PRD1P25375 712 aa2.37□□□□□ -2.03
VPS16YPL045W GDA1P32621 518 aa2.37□□□□□ -2.03
VPS16YPL045W YBR144CP34215 104 aa2.37□□□□□ -2.03
VPS16YPL045W TOD6P34219 525 aa2.37□□□□□ -2.03
VPS16YPL045W THI2P38141 450 aa2.37□□□□□ -2.03
VPS16YPL045W SIF2P38262 535 aa2.37□□□□□ -2.03
VPS16YPL045W GND1P38720 489 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W YHR054CP38780 354 aa2.37□□□□□ -2.03
VPS16YPL045W LAS21P40367 830 aa2.37□□□□□ -2.03
VPS16YPL045W FYV8P46949 817 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W RNT1Q02555 471 aa2.37□□□□□ -2.03
VPS16YPL045W RRP9Q06506 573 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W YDL073WQ07454 984 aa2.37□□□□□ -2.03
VPS16YPL045W CRT10Q08226 957 aa2.37□□□□□ -2.03
VPS16YPL045W BMS1Q08965 1183 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W ATG9Q12142 997 aa2.37□□□□□ -2.03
VPS16YPL045W TPK2P06245 380 aa2.37□□□□□ -2.03
VPS16YPL045W SMI1P32566 505 aa2.37□□□□□ -2.03
VPS16YPL045W RML2P32611 393 aa2.37□□□□□ -2.03
VPS16YPL045W GYP6P32806 458 aa2.37□□□□□ -2.03
VPS16YPL045W SOF1P33750 489 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W RRT2P38332 387 aa2.37□□□□□ -2.03
VPS16YPL045W VBA2P38358 474 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W ELO1P39540 310 aa2.37□□□□□ -2.03
VPS16YPL045W UIP3P39547 235 aa2.37□□□□□ -2.03
VPS16YPL045W ECM10P39987 644 aa2.37□□□□□ -2.03
VPS16YPL045W PMT6P42934 759 aa2.37□□□□□ -2.03
VPS16YPL045W FET5P43561 622 aa2.37□□□□□ -2.03
VPS16YPL045W RPN11P43588 306 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W STB2P46679 850 aa2.37□□□□□ -2.03
VPS16YPL045W OCA1P50946 238 aaPredicted RBP2.37□□□□□ -2.03
VPS16YPL045W DIA3P52290 468 aa2.37□□□□□ -2.03
VPS16YPL045W VPS73P53142 486 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W RIM8P53179 542 aa2.37□□□□□ -2.03
VPS16YPL045W YGR111WP53265 400 aa2.37□□□□□ -2.03
VPS16YPL045W NCS2P53923 493 aaPredicted RBP2.37□□□□□ -2.03
VPS16YPL045W RAD33Q04231 177 aa2.37□□□□□ -2.03
VPS16YPL045W HEL2Q05580 639 aaKnown RBP2.37□□□□□ -2.03
VPS16YPL045W DON1Q05610 365 aa2.37□□□□□ -2.03
VPS16YPL045W CDA2Q06703 312 aa2.37□□□□□ -2.03
VPS16YPL045W YOL159CQ08300 171 aa2.37□□□□□ -2.03
VPS16YPL045W DCI1Q08558 271 aa2.37□□□□□ -2.03
VPS16YPL045W INP53Q12271 1107 aa2.37□□□□□ -2.03
VPS16YPL045W PMA1P05030 918 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W RPL1AP0CX43 217 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W RPL1BP0CX44 217 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W ART10P18634 518 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W PUP3P25451 205 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W YME2P32843 850 aa2.36□□□□□ -2.03
VPS16YPL045W UGP1P32861 499 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W LTV1P34078 463 aa2.36□□□□□ -2.03
VPS16YPL045W HCS1P34243 683 aa2.36□□□□□ -2.03
VPS16YPL045W SNU114P36048 1008 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W PPS1P38148 807 aa2.36□□□□□ -2.03
VPS16YPL045W PIH1P38768 344 aa2.36□□□□□ -2.03
VPS16YPL045W GIP4P39732 760 aa2.36□□□□□ -2.03
VPS16YPL045W MRX1P40050 688 aa2.36□□□□□ -2.03
VPS16YPL045W YFR020WP43600 232 aa2.36□□□□□ -2.03
VPS16YPL045W RPS0BP46654 252 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W APT1P49435 187 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W PHO23P50947 330 aa2.36□□□□□ -2.03
VPS16YPL045W IST1P53843 298 aaPredicted RBP2.36□□□□□ -2.03
VPS16YPL045W PLM2Q04383 521 aa2.36□□□□□ -2.03
VPS16YPL045W DPB4Q04603 196 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W YLR456WQ06199 204 aa2.36□□□□□ -2.03
VPS16YPL045W RTT109Q07794 436 aa2.36□□□□□ -2.03
VPS16YPL045W YLR040CQ07988 224 aa2.36□□□□□ -2.03
VPS16YPL045W TAF3Q12297 353 aa2.36□□□□□ -2.03
VPS16YPL045W BUD3P25558 1636 aa2.36□□□□□ -2.03
VPS16YPL045W YLR358CO13565 187 aa2.36□□□□□ -2.03
VPS16YPL045W PPR1P07272 904 aaPredicted RBP2.36□□□□□ -2.03
VPS16YPL045W PET111P08468 800 aa2.36□□□□□ -2.03
VPS16YPL045W YML002WP0CF17 737 aa2.36□□□□□ -2.03
VPS16YPL045W IMG1P25626 169 aa2.36□□□□□ -2.03
VPS16YPL045W IDH2P28241 369 aaKnown RBP2.36□□□□□ -2.03
VPS16YPL045W LHS1P36016 881 aa2.36□□□□□ -2.03
VPS16YPL045W DAD2P36162 133 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms