RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeast

Gene SNF8, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF8	YPL002C	RTN1	Q04947	295 aa	Known RBP	4.26	□□□□□ -1.73
SNF8	YPL002C	DON1	Q05610	365 aa		4.26	□□□□□ -1.73
SNF8	YPL002C	ABP140	Q08641	628 aa	Known RBP	4.26	□□□□□ -1.73
SNF8	YPL002C	FRE7	Q12333	620 aa		4.26	□□□□□ -1.73
SNF8	YPL002C	MEC1	P38111	2368 aa		4.25	□□□□□ -1.73
SNF8	YPL002C	RNR2	P09938	399 aa	Known RBP	4.25	□□□□□ -1.73
SNF8	YPL002C	ARF2	P19146	181 aa	Known RBP	4.25	□□□□□ -1.73
SNF8	YPL002C	RML2	P32611	393 aa		4.25	□□□□□ -1.73
SNF8	YPL002C	ERV46	P39727	415 aa		4.25	□□□□□ -1.73
SNF8	YPL002C	TIF34	P40217	347 aa	Known RBP	4.25	□□□□□ -1.73
SNF8	YPL002C	DSN1	P40568	576 aa		4.25	□□□□□ -1.73
SNF8	YPL002C	AIM23	P47015	356 aa		4.25	□□□□□ -1.73
SNF8	YPL002C	BPL1	P48445	690 aa	Predicted RBP	4.25	□□□□□ -1.73
SNF8	YPL002C	COQ5	P49017	307 aa		4.25	□□□□□ -1.73
SNF8	YPL002C	NBP1	P52919	319 aa	Predicted RBP	4.25	□□□□□ -1.73
SNF8	YPL002C	IWR1	Q07532	353 aa	Predicted RBP	4.25	□□□□□ -1.73
SNF8	YPL002C	CLP1	Q08685	445 aa	Predicted RBP	4.25	□□□□□ -1.73
SNF8	YPL002C	DDC1	Q08949	612 aa		4.25	□□□□□ -1.73
SNF8	YPL002C	MED1	Q12321	566 aa		4.25	□□□□□ -1.73
SNF8	YPL002C	GIS3	Q12418	502 aa		4.25	□□□□□ -1.73
SNF8	YPL002C	HFA1	P32874	2273 aa		4.25	□□□□□ -1.73
SNF8	YPL002C	RPL19A	P0CX82	189 aa	Known RBP	4.24	□□□□□ -1.73
SNF8	YPL002C	RPL19B	P0CX83	189 aa	Predicted RBP	4.24	□□□□□ -1.73
SNF8	YPL002C	RRT12	P25381	491 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	MRPL40	P36534	297 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	NOP4	P37838	685 aa	Known RBP	4.24	□□□□□ -1.73
SNF8	YPL002C	ECM13	P38195	257 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	ASG1	P40467	964 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	LCB2	P40970	561 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	SEC27	P41811	889 aa	Known RBP	4.24	□□□□□ -1.73
SNF8	YPL002C	PXA1	P41909	870 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	FET5	P43561	622 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	VEL1	P53058	206 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	YIP4	P53093	235 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	TIM8	P57744	87 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	STP4	Q07351	490 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	PSR2	Q07949	397 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	TLG2	Q08144	397 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	GEP3	Q08622	556 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	YOR387C	Q08910	206 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	ERP4	Q12450	207 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	NKP1	Q12493	238 aa		4.24	□□□□□ -1.73
SNF8	YPL002C	ADE3	P07245	946 aa	Known RBP	4.23	□□□□□ -1.73
SNF8	YPL002C	COX11	P19516	300 aa	Known RBP	4.23	□□□□□ -1.73
SNF8	YPL002C	PMA2	P19657	947 aa		4.23	□□□□□ -1.73
SNF8	YPL002C	MUM2	P38236	366 aa		4.23	□□□□□ -1.73
SNF8	YPL002C	MGS1	P40151	587 aa		4.23	□□□□□ -1.73
SNF8	YPL002C	DJP1	P40564	432 aa		4.23	□□□□□ -1.73
SNF8	YPL002C	YJR079W	P47126	109 aa		4.23	□□□□□ -1.73
SNF8	YPL002C	RNH70	P53331	553 aa		4.23	□□□□□ -1.73
SNF8	YPL002C	AQR1	P53943	586 aa		4.23	□□□□□ -1.73
SNF8	YPL002C	RCF1	Q03713	159 aa		4.23	□□□□□ -1.73
SNF8	YPL002C	GRX3	Q03835	250 aa		4.23	□□□□□ -1.73
SNF8	YPL002C	ECM38	Q05902	660 aa	Predicted RBP	4.23	□□□□□ -1.73
SNF8	YPL002C	SUL2	Q12325	893 aa		4.23	□□□□□ -1.73
SNF8	YPL002C	SPT15	P13393	240 aa	Known RBP	4.22	□□□□□ -1.73
SNF8	YPL002C	POL30	P15873	258 aa	Known RBP	4.22	□□□□□ -1.73
SNF8	YPL002C	TUP1	P16649	713 aa		4.22	□□□□□ -1.73
SNF8	YPL002C	NFU1	P32860	256 aa		4.22	□□□□□ -1.73
SNF8	YPL002C	PFS1	P38872	237 aa		4.22	□□□□□ -1.73
SNF8	YPL002C	EXO1	P39875	702 aa		4.22	□□□□□ -1.73
SNF8	YPL002C	PSA1	P41940	361 aa	Known RBP	4.22	□□□□□ -1.73
SNF8	YPL002C	BST1	P43571	1029 aa		4.22	□□□□□ -1.73
SNF8	YPL002C	HOS2	P53096	452 aa	Predicted RBP	4.22	□□□□□ -1.73
SNF8	YPL002C	SPG3	Q04398	127 aa	Predicted RBP	4.22	□□□□□ -1.73
SNF8	YPL002C	HRD3	Q05787	833 aa		4.22	□□□□□ -1.73
SNF8	YPL002C	BNA5	Q05979	453 aa		4.22	□□□□□ -1.73
SNF8	YPL002C	COG4	Q06096	861 aa		4.22	□□□□□ -1.73
SNF8	YPL002C	SLX4	Q12098	748 aa		4.22	□□□□□ -1.73
SNF8	YPL002C	ARP7	Q12406	477 aa		4.22	□□□□□ -1.73
SNF8	YPL002C	JIP3	O13555	125 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	RPS17A	P02407	136 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	RPL7A	P05737	244 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	RPL1A	P0CX43	217 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	RPL1B	P0CX44	217 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	RPS17B	P14127	136 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	TSR4	P25040	408 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	CDC15	P27636	974 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	CAP1	P28495	268 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	BMH1	P29311	267 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	PRE4	P30657	266 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	PXA2	P34230	853 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	WSC4	P38739	605 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	PTI1	P39927	425 aa	Predicted RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	PRP24	P49960	444 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	MND1	P53102	219 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	RSC1	P53236	928 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	NRM1	P53718	249 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	SWS2	P53937	143 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	FDC1	Q03034	503 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	EFR3	Q03653	782 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	TAF9	Q05027	157 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	TCO89	Q08921	799 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	SAM4	Q08985	325 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	YPL150W	Q12152	901 aa		4.21	□□□□□ -1.74
SNF8	YPL002C	RPL7B	Q12213	244 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	NOP58	Q12499	511 aa	Known RBP	4.21	□□□□□ -1.74
SNF8	YPL002C	CPA2	P03965	1118 aa	Known RBP	4.2	□□□□□ -1.74
SNF8	YPL002C	GAL4	P04386	881 aa		4.2	□□□□□ -1.74
SNF8	YPL002C	KAR1	P11927	433 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23.1 ms