RNA–Protein interactions for RNA: YOR216C

RUD3, Transcript of Golgi matrix protein, yeast

Gene RUD3, Length 1,455 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RUD3	YOR216C	SAC6	P32599	642 aa	Known RBP	2.4	□□□□□ -2.02
RUD3	YOR216C	VPS17	P32913	551 aa		2.4	□□□□□ -2.02
RUD3	YOR216C	YKL133C	P36066	463 aa		2.4	□□□□□ -2.02
RUD3	YOR216C	SAP185	P40856	1058 aa		2.4	□□□□□ -2.02
RUD3	YOR216C	WSC2	P53832	503 aa		2.4	□□□□□ -2.02
RUD3	YOR216C	YMR018W	Q04364	514 aa		2.4	□□□□□ -2.02
RUD3	YOR216C	TSR2	Q06672	205 aa	Known RBP	2.4	□□□□□ -2.02
RUD3	YOR216C	YOR387C	Q08910	206 aa		2.4	□□□□□ -2.02
RUD3	YOR216C	PIF1	P07271	859 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	PGS1	P25578	521 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	NAM9	P27929	486 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	YIM1	P28625	365 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	SNC1	P31109	117 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	SWI3	P32591	825 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	YNK1	P36010	153 aa	Known RBP	2.39	□□□□□ -2.03
RUD3	YOR216C	TRS130	Q03660	1102 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	MLC2	Q06580	163 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	RTP1	Q12751	981 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	RRP12	Q12754	1228 aa	Known RBP	2.39	□□□□□ -2.03
RUD3	YOR216C	FOB1	O13329	566 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	PHO81	P17442	1178 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	ISY1	P21374	235 aa	Predicted RBP	2.39	□□□□□ -2.03
RUD3	YOR216C	CMK1	P27466	446 aa	Known RBP	2.39	□□□□□ -2.03
RUD3	YOR216C	NFU1	P32860	256 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	PMU1	P36069	295 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	SPC72	P39723	622 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	TMA108	P40462	946 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	MPP10	P47083	593 aa	Known RBP	2.39	□□□□□ -2.03
RUD3	YOR216C	MSO1	P53604	210 aa	Known RBP	2.39	□□□□□ -2.03
RUD3	YOR216C	IST1	P53843	298 aa	Predicted RBP	2.39	□□□□□ -2.03
RUD3	YOR216C	SXM1	Q04175	944 aa	Known RBP	2.39	□□□□□ -2.03
RUD3	YOR216C	SSK1	Q07084	712 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	ATG9	Q12142	997 aa		2.39	□□□□□ -2.03
RUD3	YOR216C	SNU66	Q12420	587 aa	Predicted RBP	2.39	□□□□□ -2.03
RUD3	YOR216C	CHS3	P29465	1165 aa		2.38	□□□□□ -2.03
RUD3	YOR216C	SRB5	P32585	307 aa		2.38	□□□□□ -2.03
RUD3	YOR216C	YME1	P32795	747 aa		2.38	□□□□□ -2.03
RUD3	YOR216C	NUP120	P35729	1037 aa		2.38	□□□□□ -2.03
RUD3	YOR216C	TUL1	P36096	758 aa		2.38	□□□□□ -2.03
RUD3	YOR216C	PKP1	P40530	394 aa		2.38	□□□□□ -2.03
RUD3	YOR216C	RPS0B	P46654	252 aa	Known RBP	2.38	□□□□□ -2.03
RUD3	YOR216C	SMC3	P47037	1230 aa		2.38	□□□□□ -2.03
RUD3	YOR216C	TGL2	P54857	326 aa		2.38	□□□□□ -2.03
RUD3	YOR216C	MEH1	Q02205	184 aa		2.38	□□□□□ -2.03
RUD3	YOR216C	YML131W	Q03102	365 aa		2.38	□□□□□ -2.03
RUD3	YOR216C	SPT7	P35177	1332 aa		2.37	□□□□□ -2.03
RUD3	YOR216C	GAL1	P04385	528 aa		2.37	□□□□□ -2.03
RUD3	YOR216C	CDC31	P06704	161 aa	Known RBP	2.37	□□□□□ -2.03
RUD3	YOR216C	SPT15	P13393	240 aa	Known RBP	2.37	□□□□□ -2.03
RUD3	YOR216C	YCR022C	P25620	114 aa		2.37	□□□□□ -2.03
RUD3	YOR216C	VPS52	P39904	641 aa		2.37	□□□□□ -2.03
RUD3	YOR216C	NDE1	P40215	560 aa		2.37	□□□□□ -2.03
RUD3	YOR216C	STR3	P53101	465 aa	Known RBP	2.37	□□□□□ -2.03
RUD3	YOR216C	OPY2	Q06810	360 aa		2.37	□□□□□ -2.03
RUD3	YOR216C	ATR1	P13090	542 aa		2.36	□□□□□ -2.03
RUD3	YOR216C	LCB1	P25045	558 aa	Known RBP	2.36	□□□□□ -2.03
RUD3	YOR216C	DEG1	P31115	442 aa	Known RBP	2.36	□□□□□ -2.03
RUD3	YOR216C	PXA2	P34230	853 aa		2.36	□□□□□ -2.03
RUD3	YOR216C	SWD3	P38123	315 aa		2.36	□□□□□ -2.03
RUD3	YOR216C	ANS1	P38832	159 aa		2.36	□□□□□ -2.03
RUD3	YOR216C	NPR2	P39923	615 aa		2.36	□□□□□ -2.03
RUD3	YOR216C	VTC2	P43585	828 aa		2.36	□□□□□ -2.03
RUD3	YOR216C	CSL4	P53859	292 aa	Predicted RBP	2.36	□□□□□ -2.03
RUD3	YOR216C	SSP2	Q08646	371 aa		2.36	□□□□□ -2.03
RUD3	YOR216C	APL4	Q12028	832 aa		2.36	□□□□□ -2.03
RUD3	YOR216C	CDC60	P26637	1090 aa	Known RBP	2.35	□□□□□ -2.03
RUD3	YOR216C	FUN19	P28003	413 aa	Predicted RBP	2.35	□□□□□ -2.03
RUD3	YOR216C	DBF20	P32328	564 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	PEX5	P35056	612 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	YKL050C	P35736	922 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	RRN3	P36070	627 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	YHL041W	P38730	149 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	HIS6	P40545	261 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	ASE1	P50275	885 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	GTR1	Q00582	310 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	RCF1	Q03713	159 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	TMA16	Q08687	178 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	SSM4	P40318	1319 aa		2.35	□□□□□ -2.03
RUD3	YOR216C	HXK2	P04807	486 aa	Known RBP	2.34	□□□□□ -2.03
RUD3	YOR216C	SUP35	P05453	685 aa	Known RBP	2.34	□□□□□ -2.03
RUD3	YOR216C	IMP2'	P32351	346 aa		2.34	□□□□□ -2.03
RUD3	YOR216C	MCM10	P32354	571 aa		2.34	□□□□□ -2.03
RUD3	YOR216C	MUM2	P38236	366 aa		2.34	□□□□□ -2.03
RUD3	YOR216C	YGR210C	P42942	411 aa		2.34	□□□□□ -2.03
RUD3	YOR216C	RSC1	P53236	928 aa		2.34	□□□□□ -2.03
RUD3	YOR216C	ERO1	Q03103	563 aa		2.34	□□□□□ -2.03
RUD3	YOR216C	RLI1	Q03195	608 aa	Known RBP	2.34	□□□□□ -2.03
RUD3	YOR216C	VIP1	Q06685	1146 aa	Known RBP	2.34	□□□□□ -2.03
RUD3	YOR216C	PSK2	Q08217	1101 aa		2.34	□□□□□ -2.03
RUD3	YOR216C	TMS1	Q12116	473 aa		2.34	□□□□□ -2.03
RUD3	YOR216C	HRT3	Q12347	344 aa		2.34	□□□□□ -2.03
RUD3	YOR216C	YOL087C	Q99247	1116 aa		2.34	□□□□□ -2.03
RUD3	YOR216C	MRP7	P12687	371 aa		2.33	□□□□□ -2.04
RUD3	YOR216C	APA1	P16550	321 aa	Known RBP	2.33	□□□□□ -2.04
RUD3	YOR216C	CLB4	P24871	460 aa		2.33	□□□□□ -2.04
RUD3	YOR216C	ROT2	P38138	954 aa		2.33	□□□□□ -2.04
RUD3	YOR216C	LAG1	P38703	411 aa		2.33	□□□□□ -2.04
RUD3	YOR216C	APE4	P38821	490 aa		2.33	□□□□□ -2.04
RUD3	YOR216C	ACA1	P39970	489 aa		2.33	□□□□□ -2.04
RUD3	YOR216C	PUG1	P40100	303 aa		2.33	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms