RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W PST1Q12355 444 aa6.54□□□□□ -1.36
LSC1YOR142W KCS1Q12494 1050 aa6.54□□□□□ -1.36
LSC1YOR142W HRP1Q99383 534 aaKnown RBP6.54□□□□□ -1.36
LSC1YOR142W AMD2P22580 549 aa6.53□□□□□ -1.36
LSC1YOR142W TRX2P22803 104 aaKnown RBP6.53□□□□□ -1.36
LSC1YOR142W ILV6P25605 309 aaKnown RBP6.53□□□□□ -1.36
LSC1YOR142W MSH1P25846 959 aa6.53□□□□□ -1.36
LSC1YOR142W SPT16P32558 1035 aaKnown RBP6.53□□□□□ -1.36
LSC1YOR142W NFU1P32860 256 aa6.53□□□□□ -1.36
LSC1YOR142W DEF1P35732 738 aaKnown RBP6.53□□□□□ -1.36
LSC1YOR142W RRP14P36080 434 aaKnown RBP6.53□□□□□ -1.36
LSC1YOR142W ARA1P38115 344 aa6.53□□□□□ -1.36
LSC1YOR142W YHR182WP38870 785 aa6.53□□□□□ -1.36
LSC1YOR142W SSP120P39931 234 aaKnown RBP6.53□□□□□ -1.36
LSC1YOR142W MGS1P40151 587 aa6.53□□□□□ -1.36
LSC1YOR142W PEP8P40335 379 aa6.53□□□□□ -1.36
LSC1YOR142W YFR020WP43600 232 aa6.53□□□□□ -1.36
LSC1YOR142W STB2P46679 850 aa6.53□□□□□ -1.36
LSC1YOR142W NNF1P47149 201 aa6.53□□□□□ -1.36
LSC1YOR142W LSC1P53598 329 aaKnown RBP6.53□□□□□ -1.36
LSC1YOR142W TAF12Q03761 539 aa6.53□□□□□ -1.36
LSC1YOR142W CSN9Q03981 162 aa6.53□□□□□ -1.36
LSC1YOR142W SPO20Q04359 397 aa6.53□□□□□ -1.36
LSC1YOR142W YLR456WQ06199 204 aa6.53□□□□□ -1.36
LSC1YOR142W GPR1Q12361 961 aa6.53□□□□□ -1.36
LSC1YOR142W YPL247CQ12523 523 aa6.53□□□□□ -1.36
LSC1YOR142W RGS2Q99188 309 aa6.53□□□□□ -1.36
LSC1YOR142W CDC21P06785 304 aa6.52□□□□□ -1.37
LSC1YOR142W PRP16P15938 1071 aaPredicted RBP6.52□□□□□ -1.37
LSC1YOR142W CWP1P28319 239 aa6.52□□□□□ -1.37
LSC1YOR142W YPT52P36018 234 aaKnown RBP6.52□□□□□ -1.37
LSC1YOR142W YJL206CP39529 758 aa6.52□□□□□ -1.37
LSC1YOR142W GIM4P40005 111 aaKnown RBP6.52□□□□□ -1.37
LSC1YOR142W SEC28P40509 296 aaKnown RBP6.52□□□□□ -1.37
LSC1YOR142W SGF73P53165 657 aa6.52□□□□□ -1.37
LSC1YOR142W CLD1P53264 445 aa6.52□□□□□ -1.37
LSC1YOR142W EGD1Q02642 157 aaKnown RBP6.52□□□□□ -1.37
LSC1YOR142W STP3Q05937 343 aa6.52□□□□□ -1.37
LSC1YOR142W UTP13Q05946 817 aaKnown RBP6.52□□□□□ -1.37
LSC1YOR142W TDA5Q06417 326 aaKnown RBP6.52□□□□□ -1.37
LSC1YOR142W GRS2Q06817 618 aa6.52□□□□□ -1.37
LSC1YOR142W YLR053CQ12026 108 aa6.52□□□□□ -1.37
LSC1YOR142W CHS5Q12114 671 aaKnown RBP6.52□□□□□ -1.37
LSC1YOR142W MDY2Q12285 212 aa6.52□□□□□ -1.37
LSC1YOR142W STB3Q12427 513 aa6.52□□□□□ -1.37
LSC1YOR142W MET8P15807 274 aa6.51□□□□□ -1.37
LSC1YOR142W CLN2P20438 545 aa6.51□□□□□ -1.37
LSC1YOR142W YCK2P23292 546 aaKnown RBP6.51□□□□□ -1.37
LSC1YOR142W MGM101P32787 269 aaKnown RBP6.51□□□□□ -1.37
LSC1YOR142W ASK1P35734 292 aa6.51□□□□□ -1.37
LSC1YOR142W SET3P36124 751 aa6.51□□□□□ -1.37
LSC1YOR142W VRP1P37370 817 aa6.51□□□□□ -1.37
LSC1YOR142W REV7P38927 245 aa6.51□□□□□ -1.37
LSC1YOR142W GCV1P48015 400 aa6.51□□□□□ -1.37
LSC1YOR142W STE23Q06010 1027 aa6.51□□□□□ -1.37
LSC1YOR142W HSH49Q99181 213 aaPredicted RBP6.51□□□□□ -1.37
LSC1YOR142W GAL4P04386 881 aa6.5□□□□□ -1.37
LSC1YOR142W TEC1P18412 486 aa6.5□□□□□ -1.37
LSC1YOR142W PHA2P32452 334 aa6.5□□□□□ -1.37
LSC1YOR142W NUP120P35729 1037 aa6.5□□□□□ -1.37
LSC1YOR142W TRM7P38238 310 aaKnown RBP6.5□□□□□ -1.37
LSC1YOR142W PHO89P38361 574 aa6.5□□□□□ -1.37
LSC1YOR142W PRE3P38624 215 aa6.5□□□□□ -1.37
LSC1YOR142W LEU5P38702 357 aa6.5□□□□□ -1.37
LSC1YOR142W YHR045WP38775 560 aa6.5□□□□□ -1.37
LSC1YOR142W YHR127WP38833 243 aaKnown RBP6.5□□□□□ -1.37
LSC1YOR142W UME6P39001 836 aa6.5□□□□□ -1.37
LSC1YOR142W PLB1P39105 664 aa6.5□□□□□ -1.37
LSC1YOR142W LRO1P40345 661 aa6.5□□□□□ -1.37
LSC1YOR142W COS12P53053 380 aa6.5□□□□□ -1.37
LSC1YOR142W ARE2P53629 642 aaKnown RBP6.5□□□□□ -1.37
LSC1YOR142W YMR155WQ03795 547 aa6.5□□□□□ -1.37
LSC1YOR142W HPT1Q04178 221 aaKnown RBP6.5□□□□□ -1.37
LSC1YOR142W TAF11Q04226 346 aa6.5□□□□□ -1.37
LSC1YOR142W SFH1Q06168 426 aa6.5□□□□□ -1.37
LSC1YOR142W VAM6Q07468 1049 aa6.5□□□□□ -1.37
LSC1YOR142W APC9Q12107 265 aa6.5□□□□□ -1.37
LSC1YOR142W YIL046W-AQ3E7Z4 54 aa6.5□□□□□ -1.37
LSC1YOR142W COX6P00427 148 aa6.49□□□□□ -1.37
LSC1YOR142W CUP1-1P0CX80 61 aa6.49□□□□□ -1.37
LSC1YOR142W CUP1-2P0CX81 61 aa6.49□□□□□ -1.37
LSC1YOR142W MEI5P32489 222 aa6.49□□□□□ -1.37
LSC1YOR142W CDC13P32797 924 aaKnown RBP6.49□□□□□ -1.37
LSC1YOR142W SKN1P33336 771 aa6.49□□□□□ -1.37
LSC1YOR142W MUD2P36084 527 aaKnown RBP6.49□□□□□ -1.37
LSC1YOR142W LYS1P38998 373 aaRIP-Chip data6.49□□□□□ -1.37not detected
LSC1YOR142W DHH1P39517 506 aaKnown RBP6.49□□□□□ -1.37
LSC1YOR142W NPT1P39683 429 aaKnown RBP6.49□□□□□ -1.37
LSC1YOR142W OAF1P39720 1047 aaPredicted RBP6.49□□□□□ -1.37
LSC1YOR142W SPF1P39986 1215 aaKnown RBP6.49□□□□□ -1.37
LSC1YOR142W MEP1P40260 492 aa6.49□□□□□ -1.37
LSC1YOR142W PFK26P40433 827 aaKnown RBP6.49□□□□□ -1.37
LSC1YOR142W CFD1P40558 293 aa6.49□□□□□ -1.37
LSC1YOR142W GCD14P46959 383 aaPredicted RBP6.49□□□□□ -1.37
LSC1YOR142W AIF1P52923 378 aa6.49□□□□□ -1.37
LSC1YOR142W YGR015CP53208 328 aa6.49□□□□□ -1.37
LSC1YOR142W RHO3Q00245 231 aaKnown RBP6.49□□□□□ -1.37
LSC1YOR142W RMI1Q02685 241 aa6.49□□□□□ -1.37
LSC1YOR142W ELP4Q02884 456 aaKnown RBP6.49□□□□□ -1.37
LSC1YOR142W RIF2Q06208 395 aa6.49□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 67.1 ms