RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W RRI1Q12468 440 aa3.76□□□□□ -1.81
TRM112YNR046W SEC39Q12745 709 aa3.76□□□□□ -1.81
TRM112YNR046W RPB8P20436 146 aa3.75□□□□□ -1.81
TRM112YNR046W REC107P21651 314 aa3.75□□□□□ -1.81
TRM112YNR046W PRD1P25375 712 aa3.75□□□□□ -1.81
TRM112YNR046W SYN8P31377 255 aa3.75□□□□□ -1.81
TRM112YNR046W YME1P32795 747 aa3.75□□□□□ -1.81
TRM112YNR046W PEX5P35056 612 aa3.75□□□□□ -1.81
TRM112YNR046W STV1P37296 890 aa3.75□□□□□ -1.81
TRM112YNR046W RPL32P38061 130 aaKnown RBP3.75□□□□□ -1.81
TRM112YNR046W RKM3P38222 552 aa3.75□□□□□ -1.81
TRM112YNR046W RFC1P38630 861 aaKnown RBP3.75□□□□□ -1.81
TRM112YNR046W MSR1P38714 643 aa3.75□□□□□ -1.81
TRM112YNR046W ANS1P38832 159 aa3.75□□□□□ -1.81
TRM112YNR046W VPS41P38959 992 aa3.75□□□□□ -1.81
TRM112YNR046W LYS20P48570 428 aaKnown RBP3.75□□□□□ -1.81
TRM112YNR046W HOS2P53096 452 aaPredicted RBP3.75□□□□□ -1.81
TRM112YNR046W YNL144CP53907 740 aa3.75□□□□□ -1.81
TRM112YNR046W RSM23Q01163 450 aa3.75□□□□□ -1.81
TRM112YNR046W RQC1Q05468 723 aaKnown RBP3.75□□□□□ -1.81
TRM112YNR046W COQ11Q05892 277 aa3.75□□□□□ -1.81
TRM112YNR046W ECM22Q05958 814 aaPredicted RBP3.75□□□□□ -1.81
TRM112YNR046W MRD1Q06106 887 aaKnown RBP3.75□□□□□ -1.81
TRM112YNR046W ATG26Q06321 1198 aa3.75□□□□□ -1.81
TRM112YNR046W YOL159CQ08300 171 aa3.75□□□□□ -1.81
TRM112YNR046W PFA4Q12006 378 aa3.75□□□□□ -1.81
TRM112YNR046W RLM1Q12224 676 aa3.75□□□□□ -1.81
TRM112YNR046W FRE7Q12333 620 aa3.75□□□□□ -1.81
TRM112YNR046W SMC6Q12749 1114 aa3.75□□□□□ -1.81
TRM112YNR046W PUT2P07275 575 aa3.74□□□□□ -1.81
TRM112YNR046W YMR085WP0CF18 432 aa3.74□□□□□ -1.81
TRM112YNR046W CLC1P17891 233 aa3.74□□□□□ -1.81
TRM112YNR046W SUI2P20459 304 aaKnown RBP3.74□□□□□ -1.81
TRM112YNR046W MBR1P23493 339 aa3.74□□□□□ -1.81
TRM112YNR046W RPC53P25441 422 aa3.74□□□□□ -1.81
TRM112YNR046W PAP1P29468 568 aaKnown RBP3.74□□□□□ -1.81
TRM112YNR046W VMA8P32610 256 aaKnown RBP3.74□□□□□ -1.81
TRM112YNR046W PMT1P33775 817 aa3.74□□□□□ -1.81
TRM112YNR046W CUE2P36075 443 aaKnown RBP3.74□□□□□ -1.81
TRM112YNR046W TOM71P38825 639 aaKnown RBP3.74□□□□□ -1.81
TRM112YNR046W SSU1P41930 458 aa3.74□□□□□ -1.81
TRM112YNR046W HXT14P42833 540 aa3.74□□□□□ -1.81
TRM112YNR046W VPS25P47142 202 aa3.74□□□□□ -1.81
TRM112YNR046W COP1P53622 1201 aaKnown RBP3.74□□□□□ -1.81
TRM112YNR046W TOF2Q02208 771 aa3.74□□□□□ -1.81
TRM112YNR046W VTC3Q02725 835 aa3.74□□□□□ -1.81
TRM112YNR046W RSC9Q03124 581 aa3.74□□□□□ -1.81
TRM112YNR046W SEG1Q04279 960 aa3.74□□□□□ -1.81
TRM112YNR046W MCP2Q06567 569 aa3.74□□□□□ -1.81
TRM112YNR046W POS5Q06892 414 aa3.74□□□□□ -1.81
TRM112YNR046W RTT109Q07794 436 aa3.74□□□□□ -1.81
TRM112YNR046W YNL162W-AQ3E7A8 72 aa3.74□□□□□ -1.81
TRM112YNR046W PEX2P32800 271 aa3.73□□□□□ -1.81
TRM112YNR046W SEC66P33754 206 aa3.73□□□□□ -1.81
TRM112YNR046W SRP72P38688 640 aaKnown RBP3.73□□□□□ -1.81
TRM112YNR046W VRG4P40107 337 aa3.73□□□□□ -1.81
TRM112YNR046W CFD1P40558 293 aa3.73□□□□□ -1.81
TRM112YNR046W YML6P51998 286 aa3.73□□□□□ -1.81
TRM112YNR046W YGR126WP53274 230 aa3.73□□□□□ -1.81
TRM112YNR046W VTA1Q06263 330 aa3.73□□□□□ -1.81
TRM112YNR046W ISA2Q12425 185 aa3.73□□□□□ -1.81
TRM112YNR046W SNF3P10870 884 aa3.72□□□□□ -1.81
TRM112YNR046W SAS3P34218 831 aa3.72□□□□□ -1.81
TRM112YNR046W SCO2P38072 301 aa3.72□□□□□ -1.81
TRM112YNR046W ROT2P38138 954 aa3.72□□□□□ -1.81
TRM112YNR046W UBA4P38820 440 aa3.72□□□□□ -1.81
TRM112YNR046W ULP2P40537 1034 aaPredicted RBP3.72□□□□□ -1.81
TRM112YNR046W STB2P46679 850 aa3.72□□□□□ -1.81
TRM112YNR046W RPS10BP46784 105 aaKnown RBP3.72□□□□□ -1.81
TRM112YNR046W CAC2Q04199 468 aa3.72□□□□□ -1.81
TRM112YNR046W RPC11Q04307 110 aaPredicted RBP3.72□□□□□ -1.81
TRM112YNR046W ADE13Q05911 482 aaKnown RBP3.72□□□□□ -1.81
TRM112YNR046W RPS10AQ08745 105 aaPredicted RBP3.72□□□□□ -1.81
TRM112YNR046W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
TRM112YNR046W CRC1Q12289 327 aa3.72□□□□□ -1.81
TRM112YNR046W YOL159C-AQ3E769 90 aa3.72□□□□□ -1.81
TRM112YNR046W YML133CQ03099 1374 aa3.72□□□□□ -1.81
TRM112YNR046W YLL067CQ07888 1374 aa3.72□□□□□ -1.81
TRM112YNR046W YLL066CQ99208 1374 aa3.72□□□□□ -1.81
TRM112YNR046W GAL4P04386 881 aa3.71□□□□□ -1.82
TRM112YNR046W HOM3P10869 527 aa3.71□□□□□ -1.82
TRM112YNR046W CDC60P26637 1090 aaKnown RBP3.71□□□□□ -1.82
TRM112YNR046W MTR2P34232 184 aaKnown RBP3.71□□□□□ -1.82
TRM112YNR046W YJL068CP40363 299 aa3.71□□□□□ -1.82
TRM112YNR046W YIL060WP40519 144 aa3.71□□□□□ -1.82
TRM112YNR046W YIL024CP40543 189 aa3.71□□□□□ -1.82
TRM112YNR046W ALK1P43633 760 aaKnown RBP3.71□□□□□ -1.82
TRM112YNR046W SGF73P53165 657 aa3.71□□□□□ -1.82
TRM112YNR046W YGR250CP53316 781 aaKnown RBP3.71□□□□□ -1.82
TRM112YNR046W DUG3P53871 357 aa3.71□□□□□ -1.82
TRM112YNR046W MSC1Q03104 513 aa3.71□□□□□ -1.82
TRM112YNR046W CTL1Q03220 320 aaKnown RBP3.71□□□□□ -1.82
TRM112YNR046W RMT2Q03305 412 aa3.71□□□□□ -1.82
TRM112YNR046W RIM13Q03792 727 aa3.71□□□□□ -1.82
TRM112YNR046W PDS5Q04264 1277 aa3.71□□□□□ -1.82
TRM112YNR046W THI7Q05998 598 aa3.71□□□□□ -1.82
TRM112YNR046W YLR352WQ06479 807 aa3.71□□□□□ -1.82
TRM112YNR046W RDR1Q08904 546 aa3.71□□□□□ -1.82
TRM112YNR046W YDL007C-AQ2V2Q0 85 aa3.71□□□□□ -1.82
TRM112YNR046W RPL31BP0C2H9 113 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms