RNA–Protein interactions for RNA: YMR176W

ECM5, Transcript of Subunit of the Snt2C complex, yeastyeast

Gene ECM5, Length 4,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM5YMR176W VTH1P40438 1549 aa2.6□□□□□ -1.99
ECM5YMR176W VTH2P40890 1549 aa2.6□□□□□ -1.99
ECM5YMR176W FOB1O13329 566 aa2.6□□□□□ -1.99
ECM5YMR176W PGK1P00560 416 aaKnown RBP2.6□□□□□ -1.99
ECM5YMR176W PGS1P25578 521 aa2.6□□□□□ -1.99
ECM5YMR176W COQ3P27680 312 aa2.6□□□□□ -1.99
ECM5YMR176W MFT1P33441 392 aaKnown RBP2.6□□□□□ -1.99
ECM5YMR176W LYS20P48570 428 aaKnown RBP2.6□□□□□ -1.99
ECM5YMR176W DIA3P52290 468 aa2.6□□□□□ -1.99
ECM5YMR176W COQ11Q05892 277 aa2.6□□□□□ -1.99
ECM5YMR176W ADE13Q05911 482 aaKnown RBP2.6□□□□□ -1.99
ECM5YMR176W IRC3Q06683 689 aa2.6□□□□□ -1.99
ECM5YMR176W FRE3Q08905 711 aa2.6□□□□□ -1.99
ECM5YMR176W GRX6Q12438 231 aa2.6□□□□□ -1.99
ECM5YMR176W NUP188P52593 1655 aaKnown RBP2.6□□□□□ -1.99
ECM5YMR176W YPT1P01123 206 aaKnown RBP2.6□□□□□ -1.99
ECM5YMR176W RAP1P11938 827 aa2.6□□□□□ -1.99
ECM5YMR176W MSS51P32335 436 aa2.6□□□□□ -1.99
ECM5YMR176W SAC1P32368 623 aaKnown RBP2.6□□□□□ -1.99
ECM5YMR176W RPS10BP46784 105 aaKnown RBP2.6□□□□□ -1.99
ECM5YMR176W SMC3P47037 1230 aa2.6□□□□□ -1.99
ECM5YMR176W JJJ1P53863 590 aa2.6□□□□□ -1.99
ECM5YMR176W MSC1Q03104 513 aa2.6□□□□□ -1.99
ECM5YMR176W YMR178WQ03219 274 aaKnown RBP2.6□□□□□ -1.99
ECM5YMR176W PFA5Q03289 374 aa2.6□□□□□ -1.99
ECM5YMR176W RPS10AQ08745 105 aaPredicted RBP2.6□□□□□ -1.99
ECM5YMR176W MET17P06106 444 aa2.59□□□□□ -1.99
ECM5YMR176W NUP1P20676 1076 aa2.59□□□□□ -1.99
ECM5YMR176W SSE2P32590 693 aaKnown RBP2.59□□□□□ -1.99
ECM5YMR176W NUP133P36161 1157 aa2.59□□□□□ -1.99
ECM5YMR176W TSC10P38342 320 aa2.59□□□□□ -1.99
ECM5YMR176W UTP9P38882 575 aaKnown RBP2.59□□□□□ -1.99
ECM5YMR176W IDP3P53982 420 aaKnown RBP2.59□□□□□ -1.99
ECM5YMR176W GIR2Q03768 265 aaPredicted RBP2.59□□□□□ -1.99
ECM5YMR176W CAC2Q04199 468 aa2.59□□□□□ -1.99
ECM5YMR176W YNL162W-AQ3E7A8 72 aa2.59□□□□□ -1.99
ECM5YMR176W TAD3Q9URQ3 322 aa2.59□□□□□ -1.99
ECM5YMR176W CNA1P23287 553 aa2.59□□□□□ -1.99
ECM5YMR176W LCB1P25045 558 aaKnown RBP2.59□□□□□ -1.99
ECM5YMR176W PEX2P32800 271 aa2.59□□□□□ -1.99
ECM5YMR176W CUE2P36075 443 aaKnown RBP2.59□□□□□ -1.99
ECM5YMR176W LEU5P38702 357 aa2.59□□□□□ -1.99
ECM5YMR176W LSM5P40089 93 aaKnown RBP2.59□□□□□ -1.99
ECM5YMR176W MET18P40469 1032 aa2.59□□□□□ -1.99
ECM5YMR176W ROK1P45818 564 aaPredicted RBP2.59□□□□□ -1.99
ECM5YMR176W HOS2P53096 452 aaPredicted RBP2.59□□□□□ -1.99
ECM5YMR176W RRP5Q05022 1729 aaKnown RBP2.59□□□□□ -2
ECM5YMR176W MF(ALPHA)1P01149 165 aa2.59□□□□□ -2
ECM5YMR176W URE2P23202 354 aaKnown RBP2.59□□□□□ -2
ECM5YMR176W MIA40P36046 403 aa2.59□□□□□ -2
ECM5YMR176W ATF1P40353 525 aa2.59□□□□□ -2
ECM5YMR176W YNL144CP53907 740 aa2.59□□□□□ -2
ECM5YMR176W BUD22Q04347 519 aaKnown RBP2.59□□□□□ -2
ECM5YMR176W YLR287CQ05881 355 aa2.59□□□□□ -2
ECM5YMR176W HSH49Q99181 213 aaPredicted RBP2.59□□□□□ -2
ECM5YMR176W DFR1P07807 211 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
ECM5YMR176W YGR066CP53242 292 aa2.58□□□□□ -2
ECM5YMR176W COP1P53622 1201 aaKnown RBP2.58□□□□□ -2
ECM5YMR176W FMP40Q08968 688 aaPredicted RBP2.58□□□□□ -2
ECM5YMR176W YLR049CQ12110 428 aa2.58□□□□□ -2
ECM5YMR176W LEU9Q12166 604 aaKnown RBP2.58□□□□□ -2
ECM5YMR176W UFD4P33202 1483 aa2.58□□□□□ -2
ECM5YMR176W WBP1P33767 430 aaKnown RBP2.58□□□□□ -2
ECM5YMR176W YBL055CP34220 418 aaPredicted RBP2.58□□□□□ -2
ECM5YMR176W YKL050CP35736 922 aa2.58□□□□□ -2
ECM5YMR176W HXT9P40885 567 aa2.58□□□□□ -2
ECM5YMR176W ARF3P40994 183 aaRIP-Chip data2.58□□□□□ -2not detected
ECM5YMR176W SNO3P43544 222 aa2.58□□□□□ -2
ECM5YMR176W DPB4Q04603 196 aaKnown RBP2.58□□□□□ -2
ECM5YMR176W SWF1Q04629 336 aa2.58□□□□□ -2
ECM5YMR176W ETT1Q08421 412 aaKnown RBP2.58□□□□□ -2
ECM5YMR176W RTN2Q12443 393 aa2.58□□□□□ -2
ECM5YMR176W MRP13P12686 339 aa2.58□□□□□ -2
ECM5YMR176W PEP3P27801 918 aa2.58□□□□□ -2
ECM5YMR176W REG2P38232 338 aa2.58□□□□□ -2
ECM5YMR176W IRC8P47046 822 aa2.58□□□□□ -2
ECM5YMR176W RPT6Q01939 405 aaKnown RBP2.58□□□□□ -2
ECM5YMR176W YER190C-BP0CX94 160 aa2.57□□□□□ -2
ECM5YMR176W YEL077W-AP0CX95 160 aa2.57□□□□□ -2
ECM5YMR176W YGR296C-BP0CX96 160 aa2.57□□□□□ -2
ECM5YMR176W YPL283W-BP0CX97 160 aa2.57□□□□□ -2
ECM5YMR176W YPR204C-AP0CX98 160 aa2.57□□□□□ -2
ECM5YMR176W RED1P14291 827 aa2.57□□□□□ -2
ECM5YMR176W TCD2P36101 447 aaKnown RBP2.57□□□□□ -2
ECM5YMR176W FAR3P46671 204 aa2.57□□□□□ -2
ECM5YMR176W VTC3Q02725 835 aa2.57□□□□□ -2
ECM5YMR176W RIM13Q03792 727 aa2.57□□□□□ -2
ECM5YMR176W RRI1Q12468 440 aa2.57□□□□□ -2
ECM5YMR176W PMS1P14242 873 aa2.57□□□□□ -2
ECM5YMR176W EST1P17214 699 aaPredicted RBP2.57□□□□□ -2
ECM5YMR176W ELO2P25358 347 aa2.57□□□□□ -2
ECM5YMR176W PRD1P25375 712 aa2.57□□□□□ -2
ECM5YMR176W GAC1P28006 793 aa2.57□□□□□ -2
ECM5YMR176W ECM32P32644 1121 aaKnown RBP2.57□□□□□ -2
ECM5YMR176W YBR144CP34215 104 aa2.57□□□□□ -2
ECM5YMR176W CST26P38226 397 aa2.57□□□□□ -2
ECM5YMR176W ANS1P38832 159 aa2.57□□□□□ -2
ECM5YMR176W MAF1P41910 395 aa2.57□□□□□ -2
ECM5YMR176W VTC2P43585 828 aa2.57□□□□□ -2
ECM5YMR176W IMD4P50094 524 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms