RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C RKM2Q03942 479 aa1.82□□□□□ -2.12
IRC20YLR247C BUD22Q04347 519 aaKnown RBP1.82□□□□□ -2.12
IRC20YLR247C AVO1Q08236 1176 aa1.82□□□□□ -2.12
IRC20YLR247C THI72Q08579 599 aa1.82□□□□□ -2.12
IRC20YLR247C FRE3Q08905 711 aa1.82□□□□□ -2.12
IRC20YLR247C RRI1Q12468 440 aa1.82□□□□□ -2.12
IRC20YLR247C YOS9Q99220 542 aa1.82□□□□□ -2.12
IRC20YLR247C PRP8P33334 2413 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C RPS18AP0CX55 146 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C RPS18BP0CX56 146 aaPredicted RBP1.81□□□□□ -2.12
IRC20YLR247C TAL1P15019 335 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C RPL8AP17076 256 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C RRP43P25359 394 aaPredicted RBP1.81□□□□□ -2.12
IRC20YLR247C HIR1P32479 840 aa1.81□□□□□ -2.12
IRC20YLR247C RPC34P32910 317 aa1.81□□□□□ -2.12
IRC20YLR247C CSE2P33308 149 aa1.81□□□□□ -2.12
IRC20YLR247C TDP1P38319 544 aa1.81□□□□□ -2.12
IRC20YLR247C SAK1P38990 1142 aa1.81□□□□□ -2.12
IRC20YLR247C RIC1P40395 1056 aa1.81□□□□□ -2.12
IRC20YLR247C ATM1P40416 690 aa1.81□□□□□ -2.12
IRC20YLR247C SEC28P40509 296 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C UFE1P41834 346 aa1.81□□□□□ -2.12
IRC20YLR247C PFD1P46988 109 aa1.81□□□□□ -2.12
IRC20YLR247C STE24P47154 453 aa1.81□□□□□ -2.12
IRC20YLR247C VOA1P53262 265 aa1.81□□□□□ -2.12
IRC20YLR247C ALF1P53904 254 aa1.81□□□□□ -2.12
IRC20YLR247C UBX4P54730 416 aa1.81□□□□□ -2.12
IRC20YLR247C GCN5Q03330 439 aa1.81□□□□□ -2.12
IRC20YLR247C MSH6Q03834 1242 aa1.81□□□□□ -2.12
IRC20YLR247C TSA2Q04120 196 aa1.81□□□□□ -2.12
IRC20YLR247C HLR1Q04429 423 aa1.81□□□□□ -2.12
IRC20YLR247C TDA9Q04545 1251 aa1.81□□□□□ -2.12
IRC20YLR247C KAP95Q06142 861 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C RSC2Q06488 889 aa1.81□□□□□ -2.12
IRC20YLR247C IWR1Q07532 353 aaPredicted RBP1.81□□□□□ -2.12
IRC20YLR247C DCI1Q08558 271 aa1.81□□□□□ -2.12
IRC20YLR247C TRM8Q12009 286 aa1.81□□□□□ -2.12
IRC20YLR247C BBP1Q12365 385 aa1.81□□□□□ -2.12
IRC20YLR247C GIS3Q12418 502 aa1.81□□□□□ -2.12
IRC20YLR247C SEY1Q99287 776 aa1.81□□□□□ -2.12
IRC20YLR247C PRP2P20095 876 aaPredicted RBP1.81□□□□□ -2.12
IRC20YLR247C VPS33P20795 691 aa1.81□□□□□ -2.12
IRC20YLR247C PWP2P25635 923 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C NAM7P30771 971 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C SRB6P32570 121 aa1.81□□□□□ -2.12
IRC20YLR247C TYE7P33122 291 aaPredicted RBP1.81□□□□□ -2.12
IRC20YLR247C YKL107WP34251 309 aa1.81□□□□□ -2.12
IRC20YLR247C SDS22P36047 338 aa1.81□□□□□ -2.12
IRC20YLR247C DAD2P36162 133 aa1.81□□□□□ -2.12
IRC20YLR247C RRM3P38766 723 aa1.81□□□□□ -2.12
IRC20YLR247C SET5P38890 526 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C PMC1P38929 1173 aaPredicted RBP1.81□□□□□ -2.12
IRC20YLR247C RVS167P39743 482 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C DSE1P40077 573 aa1.81□□□□□ -2.12
IRC20YLR247C SGN1P40561 250 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
IRC20YLR247C RTA1P53047 317 aa1.81□□□□□ -2.12
IRC20YLR247C COG2P53271 262 aa1.81□□□□□ -2.12
IRC20YLR247C ORC3P54790 616 aa1.81□□□□□ -2.12
IRC20YLR247C YDR248CQ03786 193 aa1.81□□□□□ -2.12
IRC20YLR247C YAP6Q03935 383 aa1.81□□□□□ -2.12
IRC20YLR247C HEL2Q05580 639 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C BCP1Q06338 283 aa1.81□□□□□ -2.12
IRC20YLR247C GUP2Q08929 609 aa1.81□□□□□ -2.12
IRC20YLR247C RKM5Q12367 367 aa1.81□□□□□ -2.12
IRC20YLR247C RHO2P06781 192 aa1.81□□□□□ -2.12
IRC20YLR247C CLN3P13365 580 aa1.81□□□□□ -2.12
IRC20YLR247C RSR1P13856 272 aa1.81□□□□□ -2.12
IRC20YLR247C CNB1P25296 175 aa1.81□□□□□ -2.12
IRC20YLR247C SAC1P32368 623 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C ELM1P32801 640 aa1.81□□□□□ -2.12
IRC20YLR247C CLB6P32943 380 aa1.81□□□□□ -2.12
IRC20YLR247C OPY1P38271 328 aa1.81□□□□□ -2.12
IRC20YLR247C NPT1P39683 429 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C MDJ2P42834 146 aa1.81□□□□□ -2.12
IRC20YLR247C TRS85P46944 698 aa1.81□□□□□ -2.12
IRC20YLR247C SAE2P46946 345 aa1.81□□□□□ -2.12
IRC20YLR247C ROG1P53118 685 aa1.81□□□□□ -2.12
IRC20YLR247C RAD30Q04049 632 aa1.81□□□□□ -2.12
IRC20YLR247C HPT1Q04178 221 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C VID22Q05934 901 aa1.81□□□□□ -2.12
IRC20YLR247C BUR2Q05949 395 aa1.81□□□□□ -2.12
IRC20YLR247C ECM22Q05958 814 aaPredicted RBP1.81□□□□□ -2.12
IRC20YLR247C RSA1Q08932 381 aa1.81□□□□□ -2.12
IRC20YLR247C SAM4Q08985 325 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C SUL2Q12325 893 aa1.81□□□□□ -2.12
IRC20YLR247C ENO2P00925 437 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C HXK2P04807 486 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C TRL1P09880 827 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C MCM1P11746 286 aa1.81□□□□□ -2.12
IRC20YLR247C CBP3P21560 335 aa1.81□□□□□ -2.12
IRC20YLR247C VPS34P22543 875 aa1.81□□□□□ -2.12
IRC20YLR247C FPS1P23900 669 aa1.81□□□□□ -2.12
IRC20YLR247C RSC6P25632 483 aa1.81□□□□□ -2.12
IRC20YLR247C ATG15P25641 520 aa1.81□□□□□ -2.12
IRC20YLR247C PDB1P32473 366 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C IME2P32581 645 aa1.81□□□□□ -2.12
IRC20YLR247C BMH2P34730 273 aaKnown RBP1.81□□□□□ -2.12
IRC20YLR247C ATG14P38270 344 aa1.81□□□□□ -2.12
IRC20YLR247C DUN1P39009 513 aa1.81□□□□□ -2.12
IRC20YLR247C MPT5P39016 859 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms