RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W RRT6P53117 311 aaPredicted RBP2.05□□□□□ -2.08
VPS34YLR240W CUE3P53137 624 aaKnown RBP2.05□□□□□ -2.08
VPS34YLR240W CAC2Q04199 468 aa2.05□□□□□ -2.08
VPS34YLR240W SWF1Q04629 336 aa2.05□□□□□ -2.08
VPS34YLR240W CRN1Q06440 651 aa2.05□□□□□ -2.08
VPS34YLR240W PSR2Q07949 397 aa2.05□□□□□ -2.08
VPS34YLR240W RAD61Q99359 647 aa2.05□□□□□ -2.08
VPS34YLR240W VCX1Q99385 411 aa2.05□□□□□ -2.08
VPS34YLR240W KRE2P27809 442 aa2.04□□□□□ -2.08
VPS34YLR240W SRB5P32585 307 aa2.04□□□□□ -2.08
VPS34YLR240W NTR2P36118 322 aaPredicted RBP2.04□□□□□ -2.08
VPS34YLR240W ADE17P38009 592 aaKnown RBP2.04□□□□□ -2.08
VPS34YLR240W PSY4P38193 441 aa2.04□□□□□ -2.08
VPS34YLR240W GND1P38720 489 aaKnown RBP2.04□□□□□ -2.08
VPS34YLR240W TCB2P48231 1178 aa2.04□□□□□ -2.08
VPS34YLR240W LYS20P48570 428 aaKnown RBP2.04□□□□□ -2.08
VPS34YLR240W UBP8P50102 471 aa2.04□□□□□ -2.08
VPS34YLR240W GTR1Q00582 310 aa2.04□□□□□ -2.08
VPS34YLR240W VMS1Q04311 632 aaKnown RBP2.04□□□□□ -2.08
VPS34YLR240W ECM22Q05958 814 aaPredicted RBP2.04□□□□□ -2.08
VPS34YLR240W TMA16Q08687 178 aa2.04□□□□□ -2.08
VPS34YLR240W NBL1Q3E7Y6 73 aa2.04□□□□□ -2.08
VPS34YLR240W FLO1P32768 1537 aa2.04□□□□□ -2.08
VPS34YLR240W QCR6P00127 147 aa2.04□□□□□ -2.08
VPS34YLR240W YCR006CP25350 157 aa2.04□□□□□ -2.08
VPS34YLR240W ATO2P32907 282 aa2.04□□□□□ -2.08
VPS34YLR240W TFC3P34111 1160 aa2.04□□□□□ -2.08
VPS34YLR240W PXL1P36166 706 aa2.04□□□□□ -2.08
VPS34YLR240W MRPL10P36520 322 aa2.04□□□□□ -2.08
VPS34YLR240W SCO2P38072 301 aa2.04□□□□□ -2.08
VPS34YLR240W UBP13P38187 747 aa2.04□□□□□ -2.08
VPS34YLR240W TCD1P38756 429 aa2.04□□□□□ -2.08
VPS34YLR240W MRX1P40050 688 aa2.04□□□□□ -2.08
VPS34YLR240W YIR016WP40572 265 aa2.04□□□□□ -2.08
VPS34YLR240W SWP82P43554 623 aa2.04□□□□□ -2.08
VPS34YLR240W RSC1P53236 928 aa2.04□□□□□ -2.08
VPS34YLR240W DSE3Q08729 430 aa2.04□□□□□ -2.08
VPS34YLR240W ALG1P16661 449 aa2.04□□□□□ -2.08
VPS34YLR240W CKA2P19454 339 aa2.04□□□□□ -2.08
VPS34YLR240W STE50P25344 346 aa2.04□□□□□ -2.08
VPS34YLR240W SAS3P34218 831 aa2.04□□□□□ -2.08
VPS34YLR240W MYO3P36006 1272 aa2.04□□□□□ -2.08
VPS34YLR240W TEF4P36008 412 aaKnown RBP2.04□□□□□ -2.08
VPS34YLR240W LHS1P36016 881 aa2.04□□□□□ -2.08
VPS34YLR240W MAL33P38157 468 aa2.04□□□□□ -2.08
VPS34YLR240W FUI1P38196 639 aa2.04□□□□□ -2.08
VPS34YLR240W SEC31P38968 1273 aaKnown RBP2.04□□□□□ -2.08
VPS34YLR240W YIL152WP40455 235 aa2.04□□□□□ -2.08
VPS34YLR240W CTK2P46962 323 aa2.04□□□□□ -2.08
VPS34YLR240W YGL036WP53185 909 aaPredicted RBP2.04□□□□□ -2.08
VPS34YLR240W RTS3P53289 263 aa2.04□□□□□ -2.08
VPS34YLR240W FCP1Q03254 732 aa2.04□□□□□ -2.08
VPS34YLR240W VID22Q05934 901 aa2.04□□□□□ -2.08
VPS34YLR240W MRD1Q06106 887 aaKnown RBP2.04□□□□□ -2.08
VPS34YLR240W MLH2Q07980 695 aa2.04□□□□□ -2.08
VPS34YLR240W YLR049CQ12110 428 aa2.04□□□□□ -2.08
VPS34YLR240W UBX3Q12229 455 aa2.04□□□□□ -2.08
VPS34YLR240W YER145C-AA0A023PYF4 145 aa2.03□□□□□ -2.08
VPS34YLR240W PET111P08468 800 aa2.03□□□□□ -2.08
VPS34YLR240W SNF3P10870 884 aa2.03□□□□□ -2.08
VPS34YLR240W MAK31P23059 88 aa2.03□□□□□ -2.08
VPS34YLR240W ANP1P32629 500 aa2.03□□□□□ -2.08
VPS34YLR240W SOF1P33750 489 aaKnown RBP2.03□□□□□ -2.08
VPS34YLR240W RXT2P38255 430 aa2.03□□□□□ -2.08
VPS34YLR240W ECM10P39987 644 aa2.03□□□□□ -2.08
VPS34YLR240W PFK26P40433 827 aaKnown RBP2.03□□□□□ -2.08
VPS34YLR240W SMC3P47037 1230 aa2.03□□□□□ -2.08
VPS34YLR240W VPS25P47142 202 aa2.03□□□□□ -2.08
VPS34YLR240W YGR021WP53212 290 aa2.03□□□□□ -2.08
VPS34YLR240W YNR061CP53747 219 aa2.03□□□□□ -2.08
VPS34YLR240W REG1Q00816 1014 aa2.03□□□□□ -2.08
VPS34YLR240W PRP42Q03776 544 aaKnown RBP2.03□□□□□ -2.08
VPS34YLR240W MYO5Q04439 1219 aaKnown RBP2.03□□□□□ -2.08
VPS34YLR240W GSH2Q08220 491 aa2.03□□□□□ -2.08
VPS34YLR240W FRE3Q08905 711 aa2.03□□□□□ -2.08
VPS34YLR240W TRM8Q12009 286 aa2.03□□□□□ -2.08
VPS34YLR240W RRG1Q12167 365 aaPredicted RBP2.03□□□□□ -2.08
VPS34YLR240W NOP58Q12499 511 aaKnown RBP2.03□□□□□ -2.08
VPS34YLR240W FOB1O13329 566 aa2.03□□□□□ -2.09
VPS34YLR240W SNF1P06782 633 aaKnown RBP2.03□□□□□ -2.09
VPS34YLR240W COQ1P18900 473 aa2.03□□□□□ -2.09
VPS34YLR240W LCB1P25045 558 aaKnown RBP2.03□□□□□ -2.09
VPS34YLR240W RDS1P25611 832 aa2.03□□□□□ -2.09
VPS34YLR240W YEL043WP32618 956 aa2.03□□□□□ -2.09
VPS34YLR240W PTK1P36002 662 aaPredicted RBP2.03□□□□□ -2.09
VPS34YLR240W SHC1P39000 512 aa2.03□□□□□ -2.09
VPS34YLR240W UME6P39001 836 aa2.03□□□□□ -2.09
VPS34YLR240W RIC1P40395 1056 aa2.03□□□□□ -2.09
VPS34YLR240W VPS4P52917 437 aa2.03□□□□□ -2.09
VPS34YLR240W YGL138CP53122 345 aa2.03□□□□□ -2.09
VPS34YLR240W ALF1P53904 254 aa2.03□□□□□ -2.09
VPS34YLR240W BOP3P53958 396 aa2.03□□□□□ -2.09
VPS34YLR240W ASI1P54074 624 aa2.03□□□□□ -2.09
VPS34YLR240W IRC4Q03036 179 aa2.03□□□□□ -2.09
VPS34YLR240W RSM28Q03430 361 aa2.03□□□□□ -2.09
VPS34YLR240W INM2Q05533 292 aa2.03□□□□□ -2.09
VPS34YLR240W SKG3Q06315 1026 aa2.03□□□□□ -2.09
VPS34YLR240W GPN2Q08726 347 aaPredicted RBP2.03□□□□□ -2.09
VPS34YLR240W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.03□□□□□ -2.09not detected
VPS34YLR240W ERG27Q12452 347 aaKnown RBP2.03□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms