RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeast

Gene BUD28, Length 378 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD28	YLR062C	YER158C	P40095	573 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	INA22	P40576	216 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	PET130	P47065	347 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	SPP2	Q02521	185 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	ROT1	Q03691	256 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	YMR027W	Q04371	470 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	CDC123	Q05791	360 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	STP3	Q05937	343 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	SYT1	Q06836	1226 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	NUS1	Q12063	375 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	YDR061W	Q12298	539 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	SKM1	Q12469	655 aa		4.98	□□□□□ -1.61
BUD28	YLR062C	STE2	D6VTK4	431 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	PHO5	P00635	467 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	RIP1	P08067	215 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	ILS1	P09436	1072 aa	Known RBP	4.97	□□□□□ -1.61
BUD28	YLR062C	STE4	P18851	423 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	DAL82	P21705	255 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	RSC6	P25632	483 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	BEM3	P32873	1128 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	TIP20	P33891	701 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	THI80	P35202	319 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	RPF2	P36160	344 aa	Known RBP	4.97	□□□□□ -1.61
BUD28	YLR062C	AHP1	P38013	176 aa	Known RBP	4.97	□□□□□ -1.61
BUD28	YLR062C	ARA1	P38115	344 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	OLA1	P38219	394 aa	Known RBP	4.97	□□□□□ -1.61
BUD28	YLR062C	YHR020W	P38708	688 aa	Known RBP	4.97	□□□□□ -1.61
BUD28	YLR062C	GAT1	P43574	510 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	YJR098C	P47139	656 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	NNF1	P47149	201 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	ADE12	P80210	433 aa	Known RBP	4.97	□□□□□ -1.61
BUD28	YLR062C	SLT2	Q00772	484 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	RSC2	Q06488	889 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	GRS2	Q06817	618 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	PUN1	Q06991	263 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	UPC2	Q12151	913 aa		4.97	□□□□□ -1.61
BUD28	YLR062C	PET111	P08468	800 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	RPB2	P08518	1224 aa	Known RBP	4.96	□□□□□ -1.62
BUD28	YLR062C	GPA2	P10823	449 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	KAR4	P25583	335 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
BUD28	YLR062C	CDC13	P32797	924 aa	Known RBP	4.96	□□□□□ -1.62
BUD28	YLR062C	LAS1	P36146	502 aa	Predicted RBP	4.96	□□□□□ -1.62
BUD28	YLR062C	UBA4	P38820	440 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	HAT2	P39984	401 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	GIM4	P40005	111 aa	Known RBP	4.96	□□□□□ -1.62
BUD28	YLR062C	RTS3	P53289	263 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	BUD32	P53323	261 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	RHO3	Q00245	231 aa	Known RBP	4.96	□□□□□ -1.62
BUD28	YLR062C	UBP2	Q01476	1272 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	SSL1	Q04673	461 aa	Predicted RBP	4.96	□□□□□ -1.62
BUD28	YLR062C	RSC3	Q06639	885 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	NUR1	Q12066	484 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	MRH1	Q12117	320 aa	Predicted RBP	4.96	□□□□□ -1.62
BUD28	YLR062C	ICT1	Q12385	394 aa		4.96	□□□□□ -1.62
BUD28	YLR062C	HSH49	Q99181	213 aa	Predicted RBP	4.96	□□□□□ -1.62
BUD28	YLR062C	NOP14	Q99207	810 aa	Known RBP	4.96	□□□□□ -1.62
BUD28	YLR062C	HRP1	Q99383	534 aa	Known RBP	4.96	□□□□□ -1.62
BUD28	YLR062C	MDM35	O60200	86 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	CDC8	P00572	216 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	YAR066W	P0CX18	203 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	YHR214W	P0CX19	203 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	ATP11	P32453	318 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	SKN1	P33336	771 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	DEF1	P35732	738 aa	Known RBP	4.95	□□□□□ -1.62
BUD28	YLR062C	YPT52	P36018	234 aa	Known RBP	4.95	□□□□□ -1.62
BUD28	YLR062C	RPC37	P36121	282 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	TRM7	P38238	310 aa	Known RBP	4.95	□□□□□ -1.62
BUD28	YLR062C	YHR033W	P38690	423 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	LYS1	P38998	373 aa	RIP-Chip data	4.95	□□□□□ -1.62	not detected
BUD28	YLR062C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
BUD28	YLR062C	LRO1	P40345	661 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	UTP18	P40362	594 aa	Predicted RBP	4.95	□□□□□ -1.62
BUD28	YLR062C	CFD1	P40558	293 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	PFA3	P42836	336 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	CTK1	Q03957	528 aa	Known RBP	4.95	□□□□□ -1.62
BUD28	YLR062C	TRM12	Q04235	462 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	PNP1	Q05788	311 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	ATG23	Q06671	453 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	NOP6	Q07623	225 aa	Known RBP	4.95	□□□□□ -1.62
BUD28	YLR062C	BSC6	Q08280	497 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	YDR262W	Q12331	272 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	GPR1	Q12361	961 aa		4.95	□□□□□ -1.62
BUD28	YLR062C	PRP8	P33334	2413 aa	Known RBP	4.94	□□□□□ -1.62
BUD28	YLR062C	SEC53	P07283	254 aa	Known RBP	4.94	□□□□□ -1.62
BUD28	YLR062C	ADH4	P10127	382 aa		4.94	□□□□□ -1.62
BUD28	YLR062C	SEC14	P24280	304 aa	Known RBP	4.94	□□□□□ -1.62
BUD28	YLR062C	HRR25	P29295	494 aa	Known RBP	4.94	□□□□□ -1.62
BUD28	YLR062C	RIM1	P32445	135 aa	Known RBP	4.94	□□□□□ -1.62
BUD28	YLR062C	CDC3	P32457	520 aa	Known RBP	4.94	□□□□□ -1.62
BUD28	YLR062C	DOM34	P33309	386 aa		4.94	□□□□□ -1.62
BUD28	YLR062C	NTR2	P36118	322 aa	Predicted RBP	4.94	□□□□□ -1.62
BUD28	YLR062C	SOL2	P37262	315 aa		4.94	□□□□□ -1.62
BUD28	YLR062C	ETR1	P38071	380 aa		4.94	□□□□□ -1.62
BUD28	YLR062C	SPP381	P38282	291 aa	Predicted RBP	4.94	□□□□□ -1.62
BUD28	YLR062C	UBS1	P38290	277 aa		4.94	□□□□□ -1.62
BUD28	YLR062C	YHR045W	P38775	560 aa		4.94	□□□□□ -1.62
BUD28	YLR062C	YHR182W	P38870	785 aa		4.94	□□□□□ -1.62
BUD28	YLR062C	MEP1	P40260	492 aa		4.94	□□□□□ -1.62
BUD28	YLR062C	BOL2	P53082	120 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms