RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeast

Gene CMS1, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMS1	YLR003C	PSR1	Q07800	427 aa		2.68	□□□□□ -1.98
CMS1	YLR003C	RIX7	Q07844	837 aa	Known RBP	2.68	□□□□□ -1.98
CMS1	YLR003C	YOL159C	Q08300	171 aa		2.68	□□□□□ -1.98
CMS1	YLR003C	BUD21	Q08492	214 aa	Predicted RBP	2.68	□□□□□ -1.98
CMS1	YLR003C	RPB8	P20436	146 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	SPE2	P21182	396 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	VMA16	P23968	213 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	GID7	P25569	745 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	SAC1	P32368	623 aa	Known RBP	2.67	□□□□□ -1.98
CMS1	YLR003C	YBL029W	P38201	376 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	FMP10	P40098	244 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	SLZ1	P40167	298 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	YJL213W	P40896	331 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	DPB11	P47027	764 aa	Predicted RBP	2.67	□□□□□ -1.98
CMS1	YLR003C	TMA64	Q04600	565 aa	Known RBP	2.67	□□□□□ -1.98
CMS1	YLR003C	APL4	Q12028	832 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	HUA2	Q12134	243 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	YOL087C	Q99247	1116 aa		2.67	□□□□□ -1.98
CMS1	YLR003C	TOP1	P04786	769 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	ATS1	P31386	333 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	AGA1	P32323	725 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	ERG1	P32476	496 aa	Known RBP	2.66	□□□□□ -1.98
CMS1	YLR003C	CBF2	P32504	956 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	MIC60	P36112	540 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	MAL33	P38157	468 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	ERG7	P38604	731 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	YER130C	P39959	443 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	TMA108	P40462	946 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	GUF1	P46943	645 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	DIA3	P52290	468 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	LCL3	P53153	274 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	YNR061C	P53747	219 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	SUB1	P54000	292 aa	Known RBP	2.66	□□□□□ -1.98
CMS1	YLR003C	NUP100	Q02629	959 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	YDL121C	Q07541	149 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	YDR056C	Q12025	205 aa		2.66	□□□□□ -1.98
CMS1	YLR003C	CDC16	P09798	840 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	AAC3	P18238	307 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	YEL045C	P32616	141 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	YKL050C	P35736	922 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	AGP2	P38090	596 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	ANS1	P38832	159 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	PKP1	P40530	394 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	ARC1	P46672	376 aa	Known RBP	2.65	□□□□□ -1.99
CMS1	YLR003C	AAD10	P47182	288 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	PIL1	P53252	339 aa	Known RBP	2.65	□□□□□ -1.99
CMS1	YLR003C	YSA1	Q01976	231 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	YML037C	Q03703	340 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	INP53	Q12271	1107 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	NKP1	Q12493	238 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	YBR126W-A	Q8TGU7	68 aa		2.65	□□□□□ -1.99
CMS1	YLR003C	POL4	P25615	582 aa		2.64	□□□□□ -1.99
CMS1	YLR003C	PAH1	P32567	862 aa		2.64	□□□□□ -1.99
CMS1	YLR003C	DBP8	P38719	431 aa		2.64	□□□□□ -1.99
CMS1	YLR003C	RGI2	P40188	164 aa		2.64	□□□□□ -1.99
CMS1	YLR003C	INN1	P53901	409 aa		2.64	□□□□□ -1.99
CMS1	YLR003C	BUD22	Q04347	519 aa	Known RBP	2.64	□□□□□ -1.99
CMS1	YLR003C	EMI2	Q04409	500 aa	Known RBP	2.64	□□□□□ -1.99
CMS1	YLR003C	DPB4	Q04603	196 aa	Known RBP	2.64	□□□□□ -1.99
CMS1	YLR003C	HCR1	Q05775	265 aa	Known RBP	2.64	□□□□□ -1.99
CMS1	YLR003C	ECM30	Q06673	1274 aa		2.64	□□□□□ -1.99
CMS1	YLR003C	RDR1	Q08904	546 aa		2.64	□□□□□ -1.99
CMS1	YLR003C	KRS1	P15180	591 aa	Known RBP	2.63	□□□□□ -1.99
CMS1	YLR003C	YCK1	P23291	538 aa		2.63	□□□□□ -1.99
CMS1	YLR003C	PTR3	P43606	678 aa		2.63	□□□□□ -1.99
CMS1	YLR003C	SMC3	P47037	1230 aa		2.63	□□□□□ -1.99
CMS1	YLR003C	STR3	P53101	465 aa	Known RBP	2.63	□□□□□ -1.99
CMS1	YLR003C	DUO1	P53168	247 aa	Known RBP	2.63	□□□□□ -1.99
CMS1	YLR003C	FMP45	Q07651	309 aa		2.63	□□□□□ -1.99
CMS1	YLR003C	ATG9	Q12142	997 aa		2.63	□□□□□ -1.99
CMS1	YLR003C	RPL15A	P05748	204 aa	Known RBP	2.62	□□□□□ -1.99
CMS1	YLR003C	SEC53	P07283	254 aa	Known RBP	2.62	□□□□□ -1.99
CMS1	YLR003C	PWP1	P21304	576 aa	Known RBP	2.62	□□□□□ -1.99
CMS1	YLR003C	PEP3	P27801	918 aa		2.62	□□□□□ -1.99
CMS1	YLR003C	MCM4	P30665	933 aa	Known RBP	2.62	□□□□□ -1.99
CMS1	YLR003C	UBP11	P36026	717 aa		2.62	□□□□□ -1.99
CMS1	YLR003C	AUR1	P36107	401 aa	Predicted RBP	2.62	□□□□□ -1.99
CMS1	YLR003C	DIA4	P38705	446 aa	Predicted RBP	2.62	□□□□□ -1.99
CMS1	YLR003C	UIP3	P39547	235 aa		2.62	□□□□□ -1.99
CMS1	YLR003C	SIP4	P46954	829 aa		2.62	□□□□□ -1.99
CMS1	YLR003C	LYS4	P49367	693 aa	Predicted RBP	2.62	□□□□□ -1.99
CMS1	YLR003C	DUG3	P53871	357 aa		2.62	□□□□□ -1.99
CMS1	YLR003C	SVL3	Q03088	825 aa	Known RBP	2.62	□□□□□ -1.99
CMS1	YLR003C	PAL1	Q05518	499 aa	Known RBP	2.62	□□□□□ -1.99
CMS1	YLR003C	GRC3	Q07845	632 aa		2.62	□□□□□ -1.99
CMS1	YLR003C	TEN1	Q07921	160 aa		2.62	□□□□□ -1.99
CMS1	YLR003C	SGS1	P35187	1447 aa		2.61	□□□□□ -1.99
CMS1	YLR003C	SOD1	P00445	154 aa	Known RBP	2.61	□□□□□ -1.99
CMS1	YLR003C	ARD1	P07347	238 aa	Predicted RBP	2.61	□□□□□ -1.99
CMS1	YLR003C	EST1	P17214	699 aa	Predicted RBP	2.61	□□□□□ -1.99
CMS1	YLR003C	YIH1	P25637	258 aa		2.61	□□□□□ -1.99
CMS1	YLR003C	PDB1	P32473	366 aa	Known RBP	2.61	□□□□□ -1.99
CMS1	YLR003C	SNU114	P36048	1008 aa	Known RBP	2.61	□□□□□ -1.99
CMS1	YLR003C	ROT2	P38138	954 aa		2.61	□□□□□ -1.99
CMS1	YLR003C	REG2	P38232	338 aa		2.61	□□□□□ -1.99
CMS1	YLR003C	ICS2	P38284	255 aa		2.61	□□□□□ -1.99
CMS1	YLR003C	ARP1	P38696	384 aa		2.61	□□□□□ -1.99
CMS1	YLR003C	PHO90	P39535	881 aa		2.61	□□□□□ -1.99
CMS1	YLR003C	COS10	P52924	374 aa		2.61	□□□□□ -1.99
CMS1	YLR003C	DSD1	P53095	428 aa		2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms