RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	CWC2	Q12046	339 aa	Predicted RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	FAL1	Q12099	399 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	MED2	Q12124	431 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	SSF2	Q12153	453 aa	Predicted RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	GET3	Q12154	354 aa	Known RBP	3.53	□□□□□ -1.84
SOD1	YJR104C	HER1	Q12276	1246 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	ATG34	Q12292	412 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	NTO1	Q12311	748 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	ATG31	Q12421	196 aa		3.53	□□□□□ -1.84
SOD1	YJR104C	RPN13	O13563	156 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	MRP10	O75012	95 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	HIS4	P00815	799 aa	Known RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	GPM1	P00950	247 aa	Known RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	BI4	P03879	638 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	MRP2	P10663	115 aa	Predicted RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	CDC24	P11433	854 aa	Predicted RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	RAP1	P11938	827 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	PEP5	P12868	1029 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	KSS1	P14681	368 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	SPO16	P17122	198 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	PRI2	P20457	528 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	PEX3	P28795	441 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	HIR1	P32479	840 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	TRM2	P33753	639 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	PMT1	P33775	817 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	TAF14	P35189	244 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	RPC25	P35718	212 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	CUE2	P36075	443 aa	Known RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	TFA2	P36145	328 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	CCL1	P37366	393 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	ECM31	P38122	312 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	KTR3	P38130	404 aa	Predicted RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	TDP1	P38319	544 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	PCA1	P38360	1216 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.52	□□□□□ -1.85	not detected
SOD1	YJR104C	ATG7	P38862	630 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	EMP65	P40085	556 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	IRC6	P43615	237 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	LSM8	P47093	109 aa	Known RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	MSE1	P48525	536 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	RAD17	P48581	401 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	GPI8	P49018	411 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	YGR111W	P53265	400 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	SOK2	P53438	785 aa	Predicted RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	YNR065C	P53751	1116 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	ASI2	P53895	289 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	DID2	P69771	204 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	SRP1	Q02821	542 aa	Known RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	CWC21	Q03375	135 aa	Known RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	COQ9	Q05779	260 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	ATG38	Q05789	226 aa	Known RBP	3.52	□□□□□ -1.85
SOD1	YJR104C	VTA1	Q06263	330 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	ARV1	Q06541	321 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	MLH2	Q07980	695 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	FMP25	Q08023	583 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	PEX15	Q08215	383 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	FEX1	Q08913	375 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	YDR061W	Q12298	539 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	RRI2	Q12348	645 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	NBL1	Q3E7Y6	73 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	HFA1	P32874	2273 aa		3.52	□□□□□ -1.85
SOD1	YJR104C	BRR2	P32639	2163 aa	Known RBP	3.51	□□□□□ -1.85
SOD1	YJR104C	DED1	P06634	604 aa	Known RBP	3.51	□□□□□ -1.85
SOD1	YJR104C	COR1	P07256	457 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	HTS1	P07263	546 aa	Known RBP	3.51	□□□□□ -1.85
SOD1	YJR104C	ERG11	P10614	530 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	GLN4	P13188	809 aa	Known RBP	3.51	□□□□□ -1.85
SOD1	YJR104C	PDC5	P16467	563 aa	Known RBP	3.51	□□□□□ -1.85
SOD1	YJR104C	ALG1	P16661	449 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	HNM1	P19807	563 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	MRPL8	P22353	238 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	YCL042W	P25572	119 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	PRR1	P28708	518 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	ITR1	P30605	584 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	PMT2	P31382	759 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	DGR2	P32330	852 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	VMA6	P32366	345 aa	Known RBP	3.51	□□□□□ -1.85
SOD1	YJR104C	TFC1	P32367	649 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	SSE2	P32590	693 aa	Known RBP	3.51	□□□□□ -1.85
SOD1	YJR104C	SRP101	P32916	621 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	MAE1	P36013	669 aa	Known RBP	3.51	□□□□□ -1.85
SOD1	YJR104C	SET3	P36124	751 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	YBR139W	P38109	508 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	ARA1	P38115	344 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	TSC10	P38342	320 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	MMS21	P38632	267 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
SOD1	YJR104C	SEN34	P39707	275 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	SEO1	P39709	593 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	FRT2	P39734	528 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	MEP1	P40260	492 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	PFK26	P40433	827 aa	Known RBP	3.51	□□□□□ -1.85
SOD1	YJR104C	UBP7	P40453	1071 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	YIL077C	P40508	320 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	MSS2	P40990	351 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	COS4	P43542	379 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	FET5	P43561	622 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	COS5	P47187	383 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	NAS6	P50086	228 aa		3.51	□□□□□ -1.85
SOD1	YJR104C	MNP1	P53163	194 aa	Predicted RBP	3.51	□□□□□ -1.85

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