RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C SPF1P39986 1215 aaKnown RBP9.58□□□□□ -0.88
MET28YIR017C GIM4P40005 111 aaKnown RBP9.58□□□□□ -0.88
MET28YIR017C YER034WP40022 185 aaKnown RBP9.58□□□□□ -0.88
MET28YIR017C SHY1P53266 389 aa9.58□□□□□ -0.88
MET28YIR017C IBD2P53892 351 aa9.58□□□□□ -0.88
MET28YIR017C BCH1Q05029 724 aa9.58□□□□□ -0.88
MET28YIR017C VAM6Q07468 1049 aa9.58□□□□□ -0.88
MET28YIR017C PLB3Q08108 686 aa9.58□□□□□ -0.88
MET28YIR017C TUB1P09733 447 aaKnown RBP9.57□□□□□ -0.88
MET28YIR017C VPS34P22543 875 aa9.57□□□□□ -0.88
MET28YIR017C ATP11P32453 318 aa9.57□□□□□ -0.88
MET28YIR017C MUM2P38236 366 aa9.57□□□□□ -0.88
MET28YIR017C GIC1P38785 314 aa9.57□□□□□ -0.88
MET28YIR017C SHU2P38957 223 aa9.57□□□□□ -0.88
MET28YIR017C SEC31P38968 1273 aaKnown RBP9.57□□□□□ -0.88
MET28YIR017C YEL073CP39974 107 aa9.57□□□□□ -0.88
MET28YIR017C COA1P40452 197 aa9.57□□□□□ -0.88
MET28YIR017C GAT1P43574 510 aa9.57□□□□□ -0.88
MET28YIR017C DAN4P47179 1161 aa9.57□□□□□ -0.88
MET28YIR017C MNN10P50108 393 aaKnown RBP9.57□□□□□ -0.88
MET28YIR017C SCY1P53009 804 aa9.57□□□□□ -0.88
MET28YIR017C MRM2P53123 320 aa9.57□□□□□ -0.88
MET28YIR017C SLM2P53955 656 aa9.57□□□□□ -0.88
MET28YIR017C MRS2Q01926 470 aa9.57□□□□□ -0.88
MET28YIR017C TRM12Q04235 462 aa9.57□□□□□ -0.88
MET28YIR017C HDA3Q06623 655 aa9.57□□□□□ -0.88
MET28YIR017C ENT4Q07872 247 aa9.57□□□□□ -0.88
MET28YIR017C STB3Q12427 513 aa9.57□□□□□ -0.88
MET28YIR017C AHA1Q12449 350 aaKnown RBP9.57□□□□□ -0.88
MET28YIR017C YPT6Q99260 215 aa9.57□□□□□ -0.88
MET28YIR017C NHA1Q99271 985 aa9.57□□□□□ -0.88
MET28YIR017C PHO5P00635 467 aa9.56□□□□□ -0.88
MET28YIR017C MET8P15807 274 aa9.56□□□□□ -0.88
MET28YIR017C ART10P18634 518 aaKnown RBP9.56□□□□□ -0.88
MET28YIR017C NUP120P35729 1037 aa9.56□□□□□ -0.88
MET28YIR017C GDT1P38301 280 aaPredicted RBP9.56□□□□□ -0.88
MET28YIR017C BZZ1P38822 633 aa9.56□□□□□ -0.88
MET28YIR017C PFS1P38872 237 aa9.56□□□□□ -0.88
MET28YIR017C NPT1P39683 429 aaKnown RBP9.56□□□□□ -0.88
MET28YIR017C UBP6P43593 499 aaKnown RBP9.56□□□□□ -0.88
MET28YIR017C HST3P53687 447 aa9.56□□□□□ -0.88
MET28YIR017C NOB1Q08444 459 aaKnown RBP9.56□□□□□ -0.88
MET28YIR017C RTT10Q08924 1013 aa9.56□□□□□ -0.88
MET28YIR017C NOT5Q12514 560 aaPredicted RBP9.56□□□□□ -0.88
MET28YIR017C CDC21P06785 304 aa9.55□□□□□ -0.88
MET28YIR017C YSR3P23501 404 aa9.55□□□□□ -0.88
MET28YIR017C CIN8P27895 1000 aa9.55□□□□□ -0.88
MET28YIR017C TFB1P32776 642 aa9.55□□□□□ -0.88
MET28YIR017C EAP1P36041 632 aaKnown RBP9.55□□□□□ -0.88
MET28YIR017C VRP1P37370 817 aa9.55□□□□□ -0.88
MET28YIR017C GTR2P53290 341 aa9.55□□□□□ -0.88
MET28YIR017C YPL109CQ02981 657 aa9.55□□□□□ -0.88
MET28YIR017C YFT2Q06676 274 aa9.55□□□□□ -0.88
MET28YIR017C YDL129WQ07555 291 aa9.55□□□□□ -0.88
MET28YIR017C YOL019WQ08157 551 aa9.55□□□□□ -0.88
MET28YIR017C SRO7Q12038 1033 aa9.55□□□□□ -0.88
MET28YIR017C CRM1P30822 1084 aaKnown RBP9.54□□□□□ -0.88
MET28YIR017C NIP1P32497 812 aaKnown RBP9.54□□□□□ -0.88
MET28YIR017C COX13P32799 129 aa9.54□□□□□ -0.88
MET28YIR017C HEK2P38199 381 aaKnown RBP RIP-Chip data9.54□□□□□ -0.88not detected
MET28YIR017C SCS2P40075 244 aaKnown RBP9.54□□□□□ -0.88
MET28YIR017C VMA13P41807 478 aaKnown RBP9.54□□□□□ -0.88
MET28YIR017C RNR4P49723 345 aaKnown RBP9.54□□□□□ -0.88
MET28YIR017C MPS2P53159 387 aa9.54□□□□□ -0.88
MET28YIR017C NOP19P53317 196 aaPredicted RBP9.54□□□□□ -0.88
MET28YIR017C VPS16Q03308 798 aa9.54□□□□□ -0.88
MET28YIR017C RIF2Q06208 395 aa9.54□□□□□ -0.88
MET28YIR017C YDR056CQ12025 205 aa9.54□□□□□ -0.88
MET28YIR017C BRR1Q99177 341 aaPredicted RBP9.54□□□□□ -0.88
MET28YIR017C FUM1P08417 488 aaKnown RBP9.53□□□□□ -0.88
MET28YIR017C RED1P14291 827 aa9.53□□□□□ -0.88
MET28YIR017C SCL1P21243 252 aaKnown RBP9.53□□□□□ -0.88
MET28YIR017C BAS1P22035 811 aa9.53□□□□□ -0.88
MET28YIR017C NPP1P25353 742 aa9.53□□□□□ -0.88
MET28YIR017C DEF1P35732 738 aaKnown RBP9.53□□□□□ -0.88
MET28YIR017C CTP1P38152 299 aa9.53□□□□□ -0.88
MET28YIR017C UBP14P38237 781 aaKnown RBP9.53□□□□□ -0.88
MET28YIR017C RIM11P38615 370 aa9.53□□□□□ -0.88
MET28YIR017C WSC4P38739 605 aa9.53□□□□□ -0.88
MET28YIR017C MRX1P40050 688 aa9.53□□□□□ -0.88
MET28YIR017C EMP65P40085 556 aa9.53□□□□□ -0.88
MET28YIR017C YIL108WP40483 696 aaKnown RBP9.53□□□□□ -0.88
MET28YIR017C PFA3P42836 336 aa9.53□□□□□ -0.88
MET28YIR017C NUP85P46673 744 aa9.53□□□□□ -0.88
MET28YIR017C TIS11P47977 285 aa9.53□□□□□ -0.88
MET28YIR017C YGR015CP53208 328 aa9.53□□□□□ -0.88
MET28YIR017C YNL260CP53846 198 aa9.53□□□□□ -0.88
MET28YIR017C YML131WQ03102 365 aa9.53□□□□□ -0.88
MET28YIR017C YDL121CQ07541 149 aa9.53□□□□□ -0.88
MET28YIR017C ATG34Q12292 412 aa9.53□□□□□ -0.88
MET28YIR017C PST1Q12355 444 aa9.53□□□□□ -0.88
MET28YIR017C SRN2Q99176 213 aa9.53□□□□□ -0.88
MET28YIR017C MDM35O60200 86 aa9.52□□□□□ -0.89
MET28YIR017C GUK1P15454 187 aaKnown RBP9.52□□□□□ -0.89
MET28YIR017C TOA1P32773 286 aa9.52□□□□□ -0.89
MET28YIR017C SDH3P33421 198 aa9.52□□□□□ -0.89
MET28YIR017C DED81P38707 554 aaKnown RBP9.52□□□□□ -0.89
MET28YIR017C YHR127WP38833 243 aaKnown RBP9.52□□□□□ -0.89
MET28YIR017C YJR149WP47177 404 aa9.52□□□□□ -0.89
MET28YIR017C MDM34P53083 459 aa9.52□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 29.3 ms