RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W MGT1P26188 188 aa5.56□□□□□ -1.52
VMA16YHR026W HEK2P38199 381 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
VMA16YHR026W AIM3P38266 947 aaKnown RBP5.56□□□□□ -1.52
VMA16YHR026W CBR1P38626 284 aaKnown RBP5.56□□□□□ -1.52
VMA16YHR026W ECM1P39715 212 aa5.56□□□□□ -1.52
VMA16YHR026W PRP24P49960 444 aaKnown RBP5.56□□□□□ -1.52
VMA16YHR026W COP1P53622 1201 aaKnown RBP5.56□□□□□ -1.52
VMA16YHR026W TRM112P53738 135 aaPredicted RBP5.56□□□□□ -1.52
VMA16YHR026W ENA2Q01896 1091 aa5.56□□□□□ -1.52
VMA16YHR026W YPL113CQ02961 396 aa5.56□□□□□ -1.52
VMA16YHR026W SPC24Q04477 213 aa5.56□□□□□ -1.52
VMA16YHR026W YML096WQ04489 525 aa5.56□□□□□ -1.52
VMA16YHR026W TAF9Q05027 157 aa5.56□□□□□ -1.52
VMA16YHR026W YDR338CQ05497 695 aa5.56□□□□□ -1.52
VMA16YHR026W CDA2Q06703 312 aa5.56□□□□□ -1.52
VMA16YHR026W AIM39Q08223 395 aa5.56□□□□□ -1.52
VMA16YHR026W ARP7Q12406 477 aa5.56□□□□□ -1.52
VMA16YHR026W AVL9Q12500 764 aa5.56□□□□□ -1.52
VMA16YHR026W ENA5Q12691 1091 aa5.56□□□□□ -1.52
VMA16YHR026W ILS1P09436 1072 aaKnown RBP5.55□□□□□ -1.52
VMA16YHR026W YPK1P12688 680 aaKnown RBP5.55□□□□□ -1.52
VMA16YHR026W FUN30P31380 1131 aa5.55□□□□□ -1.52
VMA16YHR026W TPS2P31688 896 aaKnown RBP5.55□□□□□ -1.52
VMA16YHR026W MRE11P32829 692 aa5.55□□□□□ -1.52
VMA16YHR026W SEC6P32844 805 aa5.55□□□□□ -1.52
VMA16YHR026W SRP101P32916 621 aa5.55□□□□□ -1.52
VMA16YHR026W TYE7P33122 291 aaPredicted RBP5.55□□□□□ -1.52
VMA16YHR026W UBS1P38290 277 aa5.55□□□□□ -1.52
VMA16YHR026W MED8P38304 223 aa5.55□□□□□ -1.52
VMA16YHR026W TSL1P38427 1098 aaKnown RBP5.55□□□□□ -1.52
VMA16YHR026W LAM1P38851 1228 aa5.55□□□□□ -1.52
VMA16YHR026W KHA1P40309 873 aa5.55□□□□□ -1.52
VMA16YHR026W YJL070CP40361 888 aa5.55□□□□□ -1.52
VMA16YHR026W BST1P43571 1029 aa5.55□□□□□ -1.52
VMA16YHR026W RTT101P47050 842 aa5.55□□□□□ -1.52
VMA16YHR026W TAF6P53040 516 aa5.55□□□□□ -1.52
VMA16YHR026W RTA1P53047 317 aa5.55□□□□□ -1.52
VMA16YHR026W PCL10P53124 433 aa5.55□□□□□ -1.52
VMA16YHR026W KTR5P53966 522 aaPredicted RBP5.55□□□□□ -1.52
VMA16YHR026W SUB1P54000 292 aaKnown RBP5.55□□□□□ -1.52
VMA16YHR026W ARO80Q04052 950 aa5.55□□□□□ -1.52
VMA16YHR026W SSL1Q04673 461 aaPredicted RBP5.55□□□□□ -1.52
VMA16YHR026W YDL073WQ07454 984 aa5.55□□□□□ -1.52
VMA16YHR026W VPS54Q12071 889 aa5.55□□□□□ -1.52
VMA16YHR026W VPS5Q92331 675 aa5.55□□□□□ -1.52
VMA16YHR026W IMA3P0CW40 589 aa5.54□□□□□ -1.52
VMA16YHR026W IMA4P0CW41 589 aa5.54□□□□□ -1.52
VMA16YHR026W CDC24P11433 854 aaPredicted RBP5.54□□□□□ -1.52
VMA16YHR026W MEI4P29467 408 aa5.54□□□□□ -1.52
VMA16YHR026W PDB1P32473 366 aaKnown RBP5.54□□□□□ -1.52
VMA16YHR026W RAD5P32849 1169 aaPredicted RBP5.54□□□□□ -1.52
VMA16YHR026W MUM2P38236 366 aa5.54□□□□□ -1.52
VMA16YHR026W LYS9P38999 446 aa5.54□□□□□ -1.52
VMA16YHR026W ZRG8P40021 1076 aa5.54□□□□□ -1.52
VMA16YHR026W TOK1P40310 691 aa5.54□□□□□ -1.52
VMA16YHR026W YIL054WP40524 105 aa5.54□□□□□ -1.52
VMA16YHR026W LIA1P47120 325 aaKnown RBP5.54□□□□□ -1.52
VMA16YHR026W YNL144CP53907 740 aa5.54□□□□□ -1.52
VMA16YHR026W YNL040WP53960 456 aaPredicted RBP5.54□□□□□ -1.52
VMA16YHR026W RPN4Q03465 531 aa5.54□□□□□ -1.52
VMA16YHR026W THI73Q07904 523 aa5.54□□□□□ -1.52
VMA16YHR026W YLR012CQ07927 99 aa5.54□□□□□ -1.52
VMA16YHR026W IMA2Q08295 589 aa5.54□□□□□ -1.52
VMA16YHR026W SPT15P13393 240 aaKnown RBP5.53□□□□□ -1.52
VMA16YHR026W ARG1P22768 420 aa5.53□□□□□ -1.52
VMA16YHR026W URA7P28274 579 aaKnown RBP5.53□□□□□ -1.52
VMA16YHR026W SRB2P34162 210 aa5.53□□□□□ -1.52
VMA16YHR026W BET3P36149 193 aa5.53□□□□□ -1.52
VMA16YHR026W YBR032WP38223 100 aa5.53□□□□□ -1.52
VMA16YHR026W YBR062CP38239 180 aa5.53□□□□□ -1.52
VMA16YHR026W HSM3P38348 480 aa5.53□□□□□ -1.52
VMA16YHR026W RRP3P38712 501 aaKnown RBP5.53□□□□□ -1.52
VMA16YHR026W CKB2P38930 258 aa5.53□□□□□ -1.52
VMA16YHR026W MEF2P39677 819 aa5.53□□□□□ -1.52
VMA16YHR026W FLC2P39719 783 aa5.53□□□□□ -1.52
VMA16YHR026W SAW1P39735 261 aa5.53□□□□□ -1.52
VMA16YHR026W SIT1P39980 628 aa5.53□□□□□ -1.52
VMA16YHR026W SCC4P40090 624 aa5.53□□□□□ -1.52
VMA16YHR026W ASG7P46993 209 aa5.53□□□□□ -1.52
VMA16YHR026W CIS3P47001 227 aa5.53□□□□□ -1.52
VMA16YHR026W GTR1Q00582 310 aa5.53□□□□□ -1.52
VMA16YHR026W SLT2Q00772 484 aa5.53□□□□□ -1.52
VMA16YHR026W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
VMA16YHR026W SIZ1Q04195 904 aa5.53□□□□□ -1.52
VMA16YHR026W AIM32Q04689 311 aa5.53□□□□□ -1.52
VMA16YHR026W TPO1Q07824 586 aa5.53□□□□□ -1.52
VMA16YHR026W DIS3Q08162 1001 aaKnown RBP5.53□□□□□ -1.52
VMA16YHR026W PEX15Q08215 383 aa5.53□□□□□ -1.52
VMA16YHR026W YDR061WQ12298 539 aa5.53□□□□□ -1.52
VMA16YHR026W GPM3Q12326 303 aa5.53□□□□□ -1.52
VMA16YHR026W GPR1Q12361 961 aa5.53□□□□□ -1.52
VMA16YHR026W RPS13P05756 151 aaKnown RBP5.52□□□□□ -1.53
VMA16YHR026W ERR1P0CX10 437 aa5.52□□□□□ -1.53
VMA16YHR026W ERR2P0CX11 437 aa5.52□□□□□ -1.53
VMA16YHR026W GAL11P19659 1081 aa5.52□□□□□ -1.53
VMA16YHR026W DIA4P38705 446 aaPredicted RBP5.52□□□□□ -1.53
VMA16YHR026W SMF2P38778 549 aa5.52□□□□□ -1.53
VMA16YHR026W LIN1P38852 340 aaPredicted RBP5.52□□□□□ -1.53
VMA16YHR026W RPT2P40327 437 aaKnown RBP5.52□□□□□ -1.53
VMA16YHR026W YIL108WP40483 696 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms