RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeast

Gene PRE9, Length 777 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE9	YGR135W	SHR3	Q02774	210 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	YPL108W	Q02872	168 aa	Predicted RBP	4.36	□□□□□ -1.71
PRE9	YGR135W	NRG1	Q03125	231 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	MTG1	Q03151	367 aa	Predicted RBP	4.36	□□□□□ -1.71
PRE9	YGR135W	TY2A-DR2	Q03483	438 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	YAP6	Q03935	383 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	RAD30	Q04049	632 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	GAD1	Q04792	585 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	YDR278C	Q05612	105 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	THI3	Q07471	609 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	TCO89	Q08921	799 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	RCN2	Q12044	265 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	TY2A-B	Q12260	438 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	TY2A-OR2	Q12293	438 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	TY2A-DR1	Q12392	438 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	TY2A-OR1	Q12439	438 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	RTN2	Q12443	393 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	TY2A-DR3	Q99303	438 aa		4.36	□□□□□ -1.71
PRE9	YGR135W	YLR462W	O13556	202 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	RPP2A	P05319	106 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	YCK1	P23291	538 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	ERG6	P25087	383 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	CAP1	P28495	268 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	GPI10	P30777	616 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	SEC21	P32074	935 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	MGM1	P32266	881 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	STE14	P32584	239 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	TRM2	P33753	639 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	SAS3	P34218	831 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	CDS1	P38221	457 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	EHT1	P38295	451 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	TIF5	P38431	405 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	YHL049C	P38722	271 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	TOM71	P38825	639 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	YEL075C	P39972	122 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	FTR1	P40088	404 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	YER189W	P40104	122 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	ALG5	P40350	334 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	YJL068C	P40363	299 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	YFL064C	P43540	174 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	NOP9	P47077	666 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	MNN10	P50108	393 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	ASE1	P50275	885 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	YGR250C	P53316	781 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	IST1	P53843	298 aa	Predicted RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	ASI1	P54074	624 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	RPM2	Q02773	1202 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	LGE1	Q02796	332 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	RCO1	Q04779	684 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	TMA10	Q06177	86 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	SMD2	Q06217	110 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	TSR1	Q07381	788 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	NOP12	Q08208	459 aa	Known RBP	4.35	□□□□□ -1.71
PRE9	YGR135W	DSE3	Q08729	430 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	SUL2	Q12325	893 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	TRM11	Q12463	433 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	YBL111C	Q3E7Y5	667 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	YPT6	Q99260	215 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	RAD61	Q99359	647 aa		4.35	□□□□□ -1.71
PRE9	YGR135W	RPL24A	P04449	155 aa	Known RBP	4.34	□□□□□ -1.71
PRE9	YGR135W	TUB3	P09734	445 aa	Known RBP	4.34	□□□□□ -1.71
PRE9	YGR135W	PMS1	P14242	873 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	HEM15	P16622	393 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	CBF1	P17106	351 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	MNE1	P24720	663 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	LCB1	P25045	558 aa	Known RBP	4.34	□□□□□ -1.71
PRE9	YGR135W	OCA4	P25366	362 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	EMC1	P25574	760 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	KRR1	P25586	316 aa	Predicted RBP	4.34	□□□□□ -1.71
PRE9	YGR135W	EFT1	P32324	842 aa	Known RBP	4.34	□□□□□ -1.71
PRE9	YGR135W	VPH2	P32341	215 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	YPT7	P32939	208 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	BUD2	P33314	1104 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	LST4	P34239	828 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	YKL100C	P34248	587 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	AST1	P35183	429 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	PTK1	P36002	662 aa	Predicted RBP	4.34	□□□□□ -1.71
PRE9	YGR135W	RPC37	P36121	282 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	END3	P39013	349 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	URM1	P40554	99 aa	Predicted RBP	4.34	□□□□□ -1.71
PRE9	YGR135W	TAF6	P53040	516 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	KRE28	Q04431	385 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	YDR286C	Q05530	114 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	YLR224W	Q05947	369 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	YSH1	Q06224	779 aa	Predicted RBP	4.34	□□□□□ -1.71
PRE9	YGR135W	ADY3	Q07732	790 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	NUS1	Q12063	375 aa		4.34	□□□□□ -1.71
PRE9	YGR135W	ERG27	Q12452	347 aa	Known RBP	4.34	□□□□□ -1.71
PRE9	YGR135W	YML002W	P0CF17	737 aa		4.33	□□□□□ -1.72
PRE9	YGR135W	YAK1	P14680	807 aa		4.33	□□□□□ -1.72
PRE9	YGR135W	URA4	P20051	364 aa		4.33	□□□□□ -1.72
PRE9	YGR135W	ERG8	P24521	451 aa		4.33	□□□□□ -1.72
PRE9	YGR135W	HCM1	P25364	564 aa		4.33	□□□□□ -1.72
PRE9	YGR135W	PRE2	P30656	287 aa	Known RBP	4.33	□□□□□ -1.72
PRE9	YGR135W	MRE11	P32829	692 aa		4.33	□□□□□ -1.72
PRE9	YGR135W	KES1	P35844	434 aa	Known RBP	4.33	□□□□□ -1.72
PRE9	YGR135W	ALY1	P36117	915 aa		4.33	□□□□□ -1.72
PRE9	YGR135W	PPS1	P38148	807 aa		4.33	□□□□□ -1.72
PRE9	YGR135W	VHC1	P38329	1120 aa		4.33	□□□□□ -1.72
PRE9	YGR135W	RRT2	P38332	387 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms