RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W ERC1P38767 581 aa3.58□□□□□ -1.84
CAF130YGR134W STN1P38960 494 aa3.58□□□□□ -1.84
CAF130YGR134W SSO2P39926 295 aa3.58□□□□□ -1.84
CAF130YGR134W ALD5P40047 520 aaKnown RBP3.58□□□□□ -1.84
CAF130YGR134W PET130P47065 347 aa3.58□□□□□ -1.84
CAF130YGR134W SOK2P53438 785 aaPredicted RBP3.58□□□□□ -1.84
CAF130YGR134W ARP5P53946 755 aa3.58□□□□□ -1.84
CAF130YGR134W EGD1Q02642 157 aaKnown RBP3.58□□□□□ -1.84
CAF130YGR134W RLM1Q12224 676 aa3.58□□□□□ -1.84
CAF130YGR134W RTC1Q08281 1341 aa3.58□□□□□ -1.84
CAF130YGR134W PRC1P00729 532 aa3.57□□□□□ -1.84
CAF130YGR134W SAG1P20840 650 aa3.57□□□□□ -1.84
CAF130YGR134W LRE1P25579 583 aaKnown RBP3.57□□□□□ -1.84
CAF130YGR134W APE3P37302 537 aaKnown RBP3.57□□□□□ -1.84
CAF130YGR134W SEC24P40482 926 aaKnown RBP3.57□□□□□ -1.84
CAF130YGR134W YAR1P46683 200 aa3.57□□□□□ -1.84
CAF130YGR134W YGL185CP53100 379 aa3.57□□□□□ -1.84
CAF130YGR134W BOP3P53958 396 aa3.57□□□□□ -1.84
CAF130YGR134W MAK10Q02197 733 aa3.57□□□□□ -1.84
CAF130YGR134W SPO19Q03029 223 aa3.57□□□□□ -1.84
CAF130YGR134W MDM30Q05930 598 aa3.57□□□□□ -1.84
CAF130YGR134W ATG9Q12142 997 aa3.57□□□□□ -1.84
CAF130YGR134W NBP2Q12163 236 aa3.57□□□□□ -1.84
CAF130YGR134W YDR461C-AQ2V2P7 80 aa3.57□□□□□ -1.84
CAF130YGR134W YLR302CO13544 120 aa3.57□□□□□ -1.84
CAF130YGR134W SSE2P32590 693 aaKnown RBP3.57□□□□□ -1.84
CAF130YGR134W IME4P41833 600 aa3.57□□□□□ -1.84
CAF130YGR134W SSY5P47002 699 aa3.57□□□□□ -1.84
CAF130YGR134W HSH155P49955 971 aaKnown RBP3.57□□□□□ -1.84
CAF130YGR134W YGL138CP53122 345 aa3.57□□□□□ -1.84
CAF130YGR134W PNC1P53184 216 aaKnown RBP3.57□□□□□ -1.84
CAF130YGR134W YGR066CP53242 292 aa3.57□□□□□ -1.84
CAF130YGR134W ERG5P54781 538 aa3.57□□□□□ -1.84
CAF130YGR134W RIM13Q03792 727 aa3.57□□□□□ -1.84
CAF130YGR134W YMR160WQ03823 816 aa3.57□□□□□ -1.84
CAF130YGR134W YOL159CQ08300 171 aa3.57□□□□□ -1.84
CAF130YGR134W PKH2Q12236 1081 aaKnown RBP3.57□□□□□ -1.84
CAF130YGR134W HIP1P06775 603 aa3.57□□□□□ -1.84
CAF130YGR134W GCD1P09032 578 aaPredicted RBP3.57□□□□□ -1.84
CAF130YGR134W SRB5P32585 307 aa3.57□□□□□ -1.84
CAF130YGR134W MRPL4P36517 319 aa3.57□□□□□ -1.84
CAF130YGR134W STV1P37296 890 aa3.57□□□□□ -1.84
CAF130YGR134W APN2P38207 520 aa3.57□□□□□ -1.84
CAF130YGR134W KEL1P38853 1164 aaKnown RBP3.57□□□□□ -1.84
CAF130YGR134W RTT102P53330 157 aa3.57□□□□□ -1.84
CAF130YGR134W OGG1P53397 376 aaPredicted RBP3.57□□□□□ -1.84
CAF130YGR134W DCP2P53550 970 aaKnown RBP3.57□□□□□ -1.84
CAF130YGR134W DSE4P53753 1117 aa3.57□□□□□ -1.84
CAF130YGR134W ERV41Q04651 352 aa3.57□□□□□ -1.84
CAF130YGR134W NCE102Q12207 173 aaRIP-Chip data3.57□□□□□ -1.84not detected
CAF130YGR134W IML1P47170 1584 aa3.56□□□□□ -1.84
CAF130YGR134W GPM1P00950 247 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W LEU4P06208 619 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W MEK1P24719 497 aaPredicted RBP3.56□□□□□ -1.84
CAF130YGR134W RPS5P26783 225 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W DCG1P32460 244 aa3.56□□□□□ -1.84
CAF130YGR134W KES1P35844 434 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W POA1P38218 177 aa3.56□□□□□ -1.84
CAF130YGR134W AIM10P39965 576 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W VFA1P40080 203 aa3.56□□□□□ -1.84
CAF130YGR134W SHR5P41912 237 aa3.56□□□□□ -1.84
CAF130YGR134W DRN1P53255 507 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W ASI2P53895 289 aa3.56□□□□□ -1.84
CAF130YGR134W RPS15Q01855 142 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W STD1Q02794 444 aa3.56□□□□□ -1.84
CAF130YGR134W FIN1Q03898 291 aa3.56□□□□□ -1.84
CAF130YGR134W VPS38Q05919 439 aa3.56□□□□□ -1.84
CAF130YGR134W RKM1Q08961 583 aaPredicted RBP3.56□□□□□ -1.84
CAF130YGR134W RBD2Q12270 262 aa3.56□□□□□ -1.84
CAF130YGR134W MLP1Q02455 1875 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W YML133CQ03099 1374 aa3.56□□□□□ -1.84
CAF130YGR134W YLL067CQ07888 1374 aa3.56□□□□□ -1.84
CAF130YGR134W YLL066CQ99208 1374 aa3.56□□□□□ -1.84
CAF130YGR134W PYC1P11154 1178 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W RNR1P21524 888 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W RPS7AP26786 190 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W MRP4P32902 394 aa3.56□□□□□ -1.84
CAF130YGR134W OSH7P38755 437 aa3.56□□□□□ -1.84
CAF130YGR134W SEC31P38968 1273 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W RIB4P50861 169 aaPredicted RBP3.56□□□□□ -1.84
CAF130YGR134W TNA1P53322 534 aa3.56□□□□□ -1.84
CAF130YGR134W EFM6P53970 246 aa3.56□□□□□ -1.84
CAF130YGR134W SYT1Q06836 1226 aa3.56□□□□□ -1.84
CAF130YGR134W YPL277CQ08989 487 aa3.56□□□□□ -1.84
CAF130YGR134W PLP2Q12017 286 aa3.56□□□□□ -1.84
CAF130YGR134W ATG31Q12421 196 aa3.56□□□□□ -1.84
CAF130YGR134W PNO1Q99216 274 aaKnown RBP3.56□□□□□ -1.84
CAF130YGR134W DFG16Q99234 619 aa3.56□□□□□ -1.84
CAF130YGR134W SNF2P22082 1703 aa3.56□□□□□ -1.84
CAF130YGR134W CBP1P07252 654 aa3.55□□□□□ -1.84
CAF130YGR134W SCH9P11792 824 aaKnown RBP3.55□□□□□ -1.84
CAF130YGR134W APA2P22108 325 aa3.55□□□□□ -1.84
CAF130YGR134W YBL029WP38201 376 aa3.55□□□□□ -1.84
CAF130YGR134W YHR033WP38690 423 aa3.55□□□□□ -1.84
CAF130YGR134W ECM1P39715 212 aa3.55□□□□□ -1.84
CAF130YGR134W PFK26P40433 827 aaKnown RBP3.55□□□□□ -1.84
CAF130YGR134W PXA1P41909 870 aa3.55□□□□□ -1.84
CAF130YGR134W RPN11P43588 306 aaKnown RBP3.55□□□□□ -1.84
CAF130YGR134W HAM1P47119 197 aaKnown RBP3.55□□□□□ -1.84
CAF130YGR134W MCM6P53091 1017 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms