RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W HIS4P00815 799 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W CHO2P05374 869 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W SSC1P0CS90 654 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W MATALPHA1P0CY06 175 aa1.05□□□□□ -2.24
SCC2YDR180W HMLALPHA1P0CY07 175 aa1.05□□□□□ -2.24
SCC2YDR180W HSF1P10961 833 aa1.05□□□□□ -2.24
SCC2YDR180W KGD1P20967 1014 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W DAL81P21657 970 aa1.05□□□□□ -2.24
SCC2YDR180W LCB1P25045 558 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W AIM26P32858 118 aa1.05□□□□□ -2.24
SCC2YDR180W CYM1P32898 989 aa1.05□□□□□ -2.24
SCC2YDR180W SUI1P32911 108 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W TRM2P33753 639 aa1.05□□□□□ -2.24
SCC2YDR180W TGL1P34163 548 aa1.05□□□□□ -2.24
SCC2YDR180W MRPL37P36532 105 aa1.05□□□□□ -2.24
SCC2YDR180W RXT2P38255 430 aa1.05□□□□□ -2.24
SCC2YDR180W YBR225WP38321 900 aa1.05□□□□□ -2.24
SCC2YDR180W SRP72P38688 640 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W MIP6P38760 659 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W SWD1P39706 426 aa1.05□□□□□ -2.24
SCC2YDR180W YIL024CP40543 189 aa1.05□□□□□ -2.24
SCC2YDR180W VTC4P47075 721 aa1.05□□□□□ -2.24
SCC2YDR180W UPF3P48412 387 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W GUP1P53154 560 aa1.05□□□□□ -2.24
SCC2YDR180W SHY1P53266 389 aa1.05□□□□□ -2.24
SCC2YDR180W ACS1Q01574 713 aa1.05□□□□□ -2.24
SCC2YDR180W YMR187CQ03236 431 aa1.05□□□□□ -2.24
SCC2YDR180W PKH1Q03407 766 aa1.05□□□□□ -2.24
SCC2YDR180W HLR1Q04429 423 aa1.05□□□□□ -2.24
SCC2YDR180W VID22Q05934 901 aa1.05□□□□□ -2.24
SCC2YDR180W STP3Q05937 343 aa1.05□□□□□ -2.24
SCC2YDR180W ADY4Q05955 493 aa1.05□□□□□ -2.24
SCC2YDR180W SYO1Q07395 620 aa1.05□□□□□ -2.24
SCC2YDR180W DSE3Q08729 430 aa1.05□□□□□ -2.24
SCC2YDR180W SAM4Q08985 325 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W DAS2Q12084 232 aa1.05□□□□□ -2.24
SCC2YDR180W RTK1Q12100 620 aaPredicted RBP1.05□□□□□ -2.24
SCC2YDR180W YOR342CQ12182 319 aa1.05□□□□□ -2.24
SCC2YDR180W FRE8Q12209 686 aa1.05□□□□□ -2.24
SCC2YDR180W SVS1Q12254 260 aa1.05□□□□□ -2.24
SCC2YDR180W FMP16Q12497 93 aa1.05□□□□□ -2.24
SCC2YDR180W RTP1Q12751 981 aa1.05□□□□□ -2.24
SCC2YDR180W LAG2Q92325 660 aa1.05□□□□□ -2.24
SCC2YDR180W PHO5P00635 467 aa1.05□□□□□ -2.24
SCC2YDR180W TUB3P09734 445 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W RED1P14291 827 aa1.05□□□□□ -2.24
SCC2YDR180W PET123P17558 318 aa1.05□□□□□ -2.24
SCC2YDR180W UGA1P17649 471 aa1.05□□□□□ -2.24
SCC2YDR180W CDC42P19073 191 aa1.05□□□□□ -2.24
SCC2YDR180W DIT1P21623 536 aa1.05□□□□□ -2.24
SCC2YDR180W PPH22P23595 377 aa1.05□□□□□ -2.24
SCC2YDR180W HCM1P25364 564 aa1.05□□□□□ -2.24
SCC2YDR180W IMG2P25642 146 aaPredicted RBP1.05□□□□□ -2.24
SCC2YDR180W SDS22P36047 338 aa1.05□□□□□ -2.24
SCC2YDR180W ECM21P38167 1117 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W YBR138CP38277 524 aa1.05□□□□□ -2.24
SCC2YDR180W YHI9P38765 294 aa1.05□□□□□ -2.24
SCC2YDR180W TPA1P40032 644 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W PIG2P40187 538 aa1.05□□□□□ -2.24
SCC2YDR180W DOT5P40553 215 aa1.05□□□□□ -2.24
SCC2YDR180W SEC27P41811 889 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W YFR018CP43599 363 aa1.05□□□□□ -2.24
SCC2YDR180W SSY5P47002 699 aa1.05□□□□□ -2.24
SCC2YDR180W HAM1P47119 197 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W TRF5P48561 642 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W KAP114P53067 1004 aa1.05□□□□□ -2.24
SCC2YDR180W MTC3P53077 123 aa1.05□□□□□ -2.24
SCC2YDR180W LCL3P53153 274 aa1.05□□□□□ -2.24
SCC2YDR180W NRD1P53617 575 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
SCC2YDR180W MTD1Q02046 320 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W UBP16Q02863 499 aa1.05□□□□□ -2.24
SCC2YDR180W OST6Q03723 332 aa1.05□□□□□ -2.24
SCC2YDR180W SGD1Q06132 899 aa1.05□□□□□ -2.24
SCC2YDR180W YPS7Q06325 596 aa1.05□□□□□ -2.24
SCC2YDR180W RRP9Q06506 573 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W GPB1Q08886 897 aa1.05□□□□□ -2.24
SCC2YDR180W FRE3Q08905 711 aa1.05□□□□□ -2.24
SCC2YDR180W YOL107WQ12239 342 aa1.05□□□□□ -2.24
SCC2YDR180W ARP7Q12406 477 aa1.05□□□□□ -2.24
SCC2YDR180W PGA3Q12746 312 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W ARG81P05085 880 aa1.04□□□□□ -2.24
SCC2YDR180W RHO1P06780 209 aaKnown RBP1.04□□□□□ -2.24
SCC2YDR180W CHS1P08004 1131 aa1.04□□□□□ -2.24
SCC2YDR180W ILS1P09436 1072 aaKnown RBP1.04□□□□□ -2.24
SCC2YDR180W LPD1P09624 499 aaKnown RBP1.04□□□□□ -2.24
SCC2YDR180W YML002WP0CF17 737 aa1.04□□□□□ -2.24
SCC2YDR180W MRP7P12687 371 aa1.04□□□□□ -2.24
SCC2YDR180W CDC26P14724 124 aa1.04□□□□□ -2.24
SCC2YDR180W HNM1P19807 563 aa1.04□□□□□ -2.24
SCC2YDR180W MIR1P23641 311 aaKnown RBP1.04□□□□□ -2.24
SCC2YDR180W RPS7AP26786 190 aaKnown RBP1.04□□□□□ -2.24
SCC2YDR180W APL1P27351 700 aa1.04□□□□□ -2.24
SCC2YDR180W PEP3P27801 918 aa1.04□□□□□ -2.24
SCC2YDR180W KRE2P27809 442 aa1.04□□□□□ -2.24
SCC2YDR180W ICL1P28240 557 aaPredicted RBP1.04□□□□□ -2.24
SCC2YDR180W TRK2P28584 889 aa1.04□□□□□ -2.24
SCC2YDR180W PRO3P32263 286 aaKnown RBP1.04□□□□□ -2.24
SCC2YDR180W GSH1P32477 678 aa1.04□□□□□ -2.24
SCC2YDR180W PET309P32522 965 aaPredicted RBP1.04□□□□□ -2.24
SCC2YDR180W RPT3P33298 428 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms