RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP43	YCR035C	CLU1	Q03690	1277 aa	Known RBP	7.37	□□□□□ -1.23
RRP43	YCR035C	SSL1	Q04673	461 aa	Predicted RBP	7.37	□□□□□ -1.23
RRP43	YCR035C	RCO1	Q04779	684 aa		7.37	□□□□□ -1.23
RRP43	YCR035C	NOT5	Q12514	560 aa	Predicted RBP	7.37	□□□□□ -1.23
RRP43	YCR035C	SUC2	P00724	532 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	HEM2	P05373	342 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	CPA1	P07258	411 aa	Known RBP	7.36	□□□□□ -1.23
RRP43	YCR035C	CDC4	P07834	779 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	PRP4	P20053	465 aa	Known RBP	7.36	□□□□□ -1.23
RRP43	YCR035C	SEC15	P22224	910 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	LRG1	P35688	1017 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	TAE1	P38340	232 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	CYC2	P38909	366 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	7.36	□□□□□ -1.23	not detected
RRP43	YCR035C	YHB1	P39676	399 aa	Known RBP	7.36	□□□□□ -1.23
RRP43	YCR035C	VMA13	P41807	478 aa	Known RBP	7.36	□□□□□ -1.23
RRP43	YCR035C	NUP84	P52891	726 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	7.36	□□□□□ -1.23	not detected
RRP43	YCR035C	ARX1	Q03862	593 aa	Known RBP	7.36	□□□□□ -1.23
RRP43	YCR035C	TRM12	Q04235	462 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	EMI1	Q04406	187 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	HDA3	Q06623	655 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	RSC3	Q06639	885 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	HBT1	Q07653	1046 aa	Known RBP	7.36	□□□□□ -1.23
RRP43	YCR035C	YOR012W	Q12351	137 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	GTT2	Q12390	233 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	Q0182	Q9ZZW1	134 aa		7.36	□□□□□ -1.23
RRP43	YCR035C	NMT1	P14743	455 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	PRP16	P15938	1071 aa	Predicted RBP	7.35	□□□□□ -1.23
RRP43	YCR035C	TIP20	P33891	701 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	SKT5	P34226	696 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	DBP8	P38719	431 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	ERP5	P38819	212 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	BZZ1	P38822	633 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	UTP9	P38882	575 aa	Known RBP	7.35	□□□□□ -1.23
RRP43	YCR035C	SSN3	P39073	555 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	PIK1	P39104	1066 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	COA1	P40452	197 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	YRB1	P41920	201 aa	Known RBP	7.35	□□□□□ -1.23
RRP43	YCR035C	NBP35	P52920	328 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	EFM5	P53200	248 aa	Known RBP	7.35	□□□□□ -1.23
RRP43	YCR035C	LSM3	P57743	89 aa	Known RBP	7.35	□□□□□ -1.23
RRP43	YCR035C	YMR102C	Q03177	834 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	CCE1	Q03702	353 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	ISR1	Q06098	443 aa	Known RBP	7.35	□□□□□ -1.23
RRP43	YCR035C	OPI10	Q08202	246 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	MET32	Q12041	191 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	FAB1	P34756	2278 aa		7.35	□□□□□ -1.23
RRP43	YCR035C	PHO5	P00635	467 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	YKR104W	P0CE69	306 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	SPT15	P13393	240 aa	Known RBP	7.34	□□□□□ -1.23
RRP43	YCR035C	EXO70	P19658	623 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	CLB1	P24868	471 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	RFA2	P26754	273 aa	Known RBP	7.34	□□□□□ -1.23
RRP43	YCR035C	NUP120	P35729	1037 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	CAB3	P36076	571 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	GMH1	P36125	273 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	CTP1	P38152	299 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	IML3	P38265	245 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	FMO1	P38866	432 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	GAT1	P43574	510 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	YGL108C	P53139	140 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	CWC24	P53769	259 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	IBD2	P53892	351 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	SLM2	P53955	656 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	RIF2	Q06208	395 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	VAM6	Q07468	1049 aa		7.34	□□□□□ -1.23
RRP43	YCR035C	SAM4	Q08985	325 aa	Known RBP	7.34	□□□□□ -1.23
RRP43	YCR035C	BEM2	P39960	2167 aa	Known RBP	7.34	□□□□□ -1.23
RRP43	YCR035C	HOM2	P13663	365 aa	Known RBP	7.33	□□□□□ -1.24
RRP43	YCR035C	ARG1	P22768	420 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	RSC6	P25632	483 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	CCR4	P31384	837 aa	Known RBP	7.33	□□□□□ -1.24
RRP43	YCR035C	MVD1	P32377	396 aa	Known RBP	7.33	□□□□□ -1.24
RRP43	YCR035C	RML2	P32611	393 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	TOA1	P32773	286 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	MKS1	P34072	584 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	RIM11	P38615	370 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	RFC3	P38629	340 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	HXT5	P38695	592 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	YHR020W	P38708	688 aa	Known RBP	7.33	□□□□□ -1.24
RRP43	YCR035C	YHR045W	P38775	560 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	DHH1	P39517	506 aa	Known RBP	7.33	□□□□□ -1.24
RRP43	YCR035C	SCS2	P40075	244 aa	Known RBP	7.33	□□□□□ -1.24
RRP43	YCR035C	LSM5	P40089	93 aa	Known RBP	7.33	□□□□□ -1.24
RRP43	YCR035C	MEP1	P40260	492 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	UTP18	P40362	594 aa	Predicted RBP	7.33	□□□□□ -1.24
RRP43	YCR035C	YFR018C	P43599	363 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	TIS11	P47977	285 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	MTO1	P53070	669 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	ART5	P53244	586 aa	Known RBP	7.33	□□□□□ -1.24
RRP43	YCR035C	TGL2	P54857	326 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	UBP2	Q01476	1272 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	ARG7	Q04728	441 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	TRM8	Q12009	286 aa		7.33	□□□□□ -1.24
RRP43	YCR035C	CDC21	P06785	304 aa		7.32	□□□□□ -1.24
RRP43	YCR035C	YAR066W	P0CX18	203 aa		7.32	□□□□□ -1.24
RRP43	YCR035C	YHR214W	P0CX19	203 aa		7.32	□□□□□ -1.24
RRP43	YCR035C	GUK1	P15454	187 aa	Known RBP	7.32	□□□□□ -1.24
RRP43	YCR035C	PHO84	P25297	587 aa	Known RBP	7.32	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms