RNA–Protein interactions for RNA: YBR253W

SRB6, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB6, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB6	YBR253W	HXT3	P32466	567 aa	Known RBP	4.85	□□□□□ -1.63
SRB6	YBR253W	MRE11	P32829	692 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	LOT5	P34234	306 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	ELF1	P36053	145 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	OSW5	P40219	148 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	ALT2	P52892	507 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	MNP1	P53163	194 aa	Predicted RBP	4.85	□□□□□ -1.63
SRB6	YBR253W	SPC98	P53540	846 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	BOP3	P53958	396 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	PRO2	P54885	456 aa	Known RBP	4.85	□□□□□ -1.63
SRB6	YBR253W	TIM11	P81449	96 aa	Predicted RBP	4.85	□□□□□ -1.63
SRB6	YBR253W	MAK10	Q02197	733 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	DUS4	Q06063	367 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	DBP9	Q06218	594 aa	Known RBP	4.85	□□□□□ -1.63
SRB6	YBR253W	DCI1	Q08558	271 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	THI72	Q08579	599 aa		4.85	□□□□□ -1.63
SRB6	YBR253W	MF(ALPHA)1	P01149	165 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	RPS19A	P07280	144 aa	Known RBP	4.84	□□□□□ -1.63
SRB6	YBR253W	RPS19B	P07281	144 aa	Predicted RBP	4.84	□□□□□ -1.63
SRB6	YBR253W	PDA1	P16387	420 aa	Known RBP	4.84	□□□□□ -1.63
SRB6	YBR253W	YSP3	P25036	478 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	PPQ1	P32945	549 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	SUR1	P33300	382 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	SEC66	P33754	206 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	TIF3	P34167	436 aa	Known RBP	4.84	□□□□□ -1.63
SRB6	YBR253W	PCH2	P38126	564 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	YBR053C	P38235	358 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	SLM4	P38247	162 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	PLB1	P39105	664 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	MRX1	P40050	688 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	PKP1	P40530	394 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	IRC8	P47046	822 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	MSE1	P48525	536 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	MUP1	P50276	574 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	SHE4	P51534	789 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	PAN2	P53010	1115 aa	Predicted RBP	4.84	□□□□□ -1.63
SRB6	YBR253W	SNO2	P53823	222 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	PDR16	P53860	351 aa	Known RBP	4.84	□□□□□ -1.63
SRB6	YBR253W	ERV25	P54837	211 aa	Known RBP	4.84	□□□□□ -1.63
SRB6	YBR253W	MRI1	Q06489	411 aa	Known RBP	4.84	□□□□□ -1.63
SRB6	YBR253W	RXT3	Q07458	294 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	CFT2	Q12102	859 aa	Predicted RBP	4.84	□□□□□ -1.63
SRB6	YBR253W	MDY2	Q12285	212 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	CEX1	Q12453	761 aa		4.84	□□□□□ -1.63
SRB6	YBR253W	RPO41	P13433	1351 aa	Known RBP	4.83	□□□□□ -1.64
SRB6	YBR253W	CYC7	P00045	113 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	LPD1	P09624	499 aa	Known RBP	4.83	□□□□□ -1.64
SRB6	YBR253W	MRP13	P12686	339 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	DAP2	P18962	818 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	CDC5	P32562	705 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	YME2	P32843	850 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	MIC60	P36112	540 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	NTR2	P36118	322 aa	Predicted RBP	4.83	□□□□□ -1.64
SRB6	YBR253W	CTP1	P38152	299 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	MTG2	P38860	518 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	MEF2	P39677	819 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	BUR6	P40096	142 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	ALG5	P40350	334 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	IPI3	P53877	555 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	MFM1	Q02783	413 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	RSM28	Q03430	361 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	YMR111C	Q04461	462 aa	Predicted RBP	4.83	□□□□□ -1.64
SRB6	YBR253W	VTA1	Q06263	330 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	SWA2	Q06677	668 aa		4.83	□□□□□ -1.64
SRB6	YBR253W	ACK1	Q07622	623 aa	Predicted RBP	4.83	□□□□□ -1.64
SRB6	YBR253W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
SRB6	YBR253W	COX1	P00401	534 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	APN1	P22936	367 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	GAR1	P28007	205 aa	Known RBP	4.82	□□□□□ -1.64
SRB6	YBR253W	RML2	P32611	393 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	RAD24	P32641	659 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	PHO11	P35842	467 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	KAE1	P36132	386 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	PHO12	P38693	467 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	VPS41	P38959	992 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	RSM25	P40496	264 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	AMA1	P50082	593 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	DIA3	P52290	468 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	RHO5	P53879	331 aa	Known RBP	4.82	□□□□□ -1.64
SRB6	YBR253W	RPS15	Q01855	142 aa	Known RBP	4.82	□□□□□ -1.64
SRB6	YBR253W	TLG1	Q03322	224 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	GCN5	Q03330	439 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	YLR224W	Q05947	369 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	PHO92	Q06390	306 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	NOP6	Q07623	225 aa	Known RBP	4.82	□□□□□ -1.64
SRB6	YBR253W	MCA1	Q08601	432 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	UAF30	Q08747	228 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	LAS17	Q12446	633 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	SEC39	Q12745	709 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	AI5_ALPHA	Q9ZZX1	630 aa		4.82	□□□□□ -1.64
SRB6	YBR253W	QCR6	P00127	147 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	RNR2	P09938	399 aa	Known RBP	4.81	□□□□□ -1.64
SRB6	YBR253W	KGD1	P20967	1014 aa	Known RBP	4.81	□□□□□ -1.64
SRB6	YBR253W	AMD2	P22580	549 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	PPH22	P23595	377 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	FUB1	P25659	250 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	CDC20	P26309	610 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	CNE1	P27825	502 aa		4.81	□□□□□ -1.64
SRB6	YBR253W	HSP104	P31539	908 aa	Known RBP	4.81	□□□□□ -1.64
SRB6	YBR253W	SIP1	P32578	815 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms