RNA–Protein interactions for RNA: YBR148W

YSW1, Transcript of Protein required for normal prospore membrane formation, yeastyeast

Gene YSW1, Length 1,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSW1YBR148W EMI2Q04409 500 aaKnown RBP2.36□□□□□ -2.03
YSW1YBR148W TEN1Q07921 160 aa2.36□□□□□ -2.03
YSW1YBR148W RDR1Q08904 546 aa2.36□□□□□ -2.03
YSW1YBR148W PMS1P14242 873 aa2.35□□□□□ -2.03
YSW1YBR148W PDA1P16387 420 aaKnown RBP2.35□□□□□ -2.03
YSW1YBR148W YCR022CP25620 114 aa2.35□□□□□ -2.03
YSW1YBR148W MCM4P30665 933 aaKnown RBP2.35□□□□□ -2.03
YSW1YBR148W MCM10P32354 571 aa2.35□□□□□ -2.03
YSW1YBR148W TRS65P32893 560 aa2.35□□□□□ -2.03
YSW1YBR148W AGP2P38090 596 aa2.35□□□□□ -2.03
YSW1YBR148W MAL33P38157 468 aa2.35□□□□□ -2.03
YSW1YBR148W KAP123P40069 1113 aaKnown RBP2.35□□□□□ -2.03
YSW1YBR148W LYS14P40971 790 aa2.35□□□□□ -2.03
YSW1YBR148W BUD32P53323 261 aa2.35□□□□□ -2.03
YSW1YBR148W TDA7P53882 636 aaPredicted RBP2.35□□□□□ -2.03
YSW1YBR148W YPL014WQ02606 381 aa2.35□□□□□ -2.03
YSW1YBR148W NGL3Q03210 505 aa2.35□□□□□ -2.03
YSW1YBR148W YDR415CQ04033 374 aaPredicted RBP2.35□□□□□ -2.03
YSW1YBR148W HCR1Q05775 265 aaKnown RBP2.35□□□□□ -2.03
YSW1YBR148W APL4Q12028 832 aa2.35□□□□□ -2.03
YSW1YBR148W ARD1P07347 238 aaPredicted RBP2.35□□□□□ -2.03
YSW1YBR148W YCK1P23291 538 aa2.35□□□□□ -2.03
YSW1YBR148W ELO2P25358 347 aa2.35□□□□□ -2.03
YSW1YBR148W YKL050CP35736 922 aa2.35□□□□□ -2.03
YSW1YBR148W AUR1P36107 401 aaPredicted RBP2.35□□□□□ -2.03
YSW1YBR148W AXL1P40851 1208 aa2.35□□□□□ -2.03
YSW1YBR148W ERG26P53199 349 aaKnown RBP2.35□□□□□ -2.03
YSW1YBR148W RPM2Q02773 1202 aa2.35□□□□□ -2.03
YSW1YBR148W PSR1Q07800 427 aa2.35□□□□□ -2.03
YSW1YBR148W THI20Q08224 551 aa2.35□□□□□ -2.03
YSW1YBR148W TIP41Q12199 356 aa2.35□□□□□ -2.03
YSW1YBR148W NKP1Q12493 238 aa2.35□□□□□ -2.03
YSW1YBR148W YBR298C-AQ8TGK4 73 aa2.35□□□□□ -2.03
YSW1YBR148W YOR111WQ99210 232 aa2.35□□□□□ -2.03
YSW1YBR148W RPL15AP05748 204 aaKnown RBP2.34□□□□□ -2.03
YSW1YBR148W YML002WP0CF17 737 aa2.34□□□□□ -2.03
YSW1YBR148W PUP3P25451 205 aaKnown RBP2.34□□□□□ -2.03
YSW1YBR148W TIF3P34167 436 aaKnown RBP2.34□□□□□ -2.03
YSW1YBR148W NUP133P36161 1157 aa2.34□□□□□ -2.03
YSW1YBR148W ROT2P38138 954 aa2.34□□□□□ -2.03
YSW1YBR148W RTS1P38903 757 aa2.34□□□□□ -2.03
YSW1YBR148W CCT6P39079 546 aa2.34□□□□□ -2.03
YSW1YBR148W ARC1P46672 376 aaKnown RBP2.34□□□□□ -2.03
YSW1YBR148W EFM6P53970 246 aa2.34□□□□□ -2.03
YSW1YBR148W YVH1Q02256 364 aaKnown RBP2.34□□□□□ -2.03
YSW1YBR148W MSS11Q03825 758 aa2.34□□□□□ -2.03
YSW1YBR148W ECM30Q06673 1274 aa2.34□□□□□ -2.03
YSW1YBR148W POL4P25615 582 aa2.33□□□□□ -2.04
YSW1YBR148W RPR2P40571 144 aa2.33□□□□□ -2.04
YSW1YBR148W APT1P49435 187 aaKnown RBP2.33□□□□□ -2.04
YSW1YBR148W DIA3P52290 468 aa2.33□□□□□ -2.04
YSW1YBR148W BSC5P53755 489 aa2.33□□□□□ -2.04
YSW1YBR148W DPB4Q04603 196 aaKnown RBP2.33□□□□□ -2.04
YSW1YBR148W LEU9Q12166 604 aaKnown RBP2.33□□□□□ -2.04
YSW1YBR148W MRP13P12686 339 aa2.33□□□□□ -2.04
YSW1YBR148W RER1P25560 188 aa2.33□□□□□ -2.04
YSW1YBR148W DBP8P38719 431 aa2.33□□□□□ -2.04
YSW1YBR148W VPS52P39904 641 aa2.33□□□□□ -2.04
YSW1YBR148W YEL068CP39977 110 aa2.33□□□□□ -2.04
YSW1YBR148W SGN1P40561 250 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
YSW1YBR148W SMM1P53720 384 aaKnown RBP2.33□□□□□ -2.04
YSW1YBR148W SAM50P53969 484 aa2.33□□□□□ -2.04
YSW1YBR148W RLI1Q03195 608 aaKnown RBP2.33□□□□□ -2.04
YSW1YBR148W VMS1Q04311 632 aaKnown RBP2.33□□□□□ -2.04
YSW1YBR148W ARG81P05085 880 aa2.32□□□□□ -2.04
YSW1YBR148W CDC16P09798 840 aa2.32□□□□□ -2.04
YSW1YBR148W CDC24P11433 854 aaPredicted RBP2.32□□□□□ -2.04
YSW1YBR148W AMD1P15274 810 aaKnown RBP2.32□□□□□ -2.04
YSW1YBR148W BUD5P25300 642 aaPredicted RBP2.32□□□□□ -2.04
YSW1YBR148W CHS3P29465 1165 aa2.32□□□□□ -2.04
YSW1YBR148W AGA1P32323 725 aa2.32□□□□□ -2.04
YSW1YBR148W SIP2P34164 415 aaKnown RBP2.32□□□□□ -2.04
YSW1YBR148W YBL055CP34220 418 aaPredicted RBP2.32□□□□□ -2.04
YSW1YBR148W UPF3P48412 387 aaKnown RBP2.32□□□□□ -2.04
YSW1YBR148W COS10P52924 374 aa2.32□□□□□ -2.04
YSW1YBR148W RHO4Q00246 291 aa2.32□□□□□ -2.04
YSW1YBR148W SCW10Q04951 389 aa2.32□□□□□ -2.04
YSW1YBR148W COQ9Q05779 260 aa2.32□□□□□ -2.04
YSW1YBR148W LUC7Q07508 261 aaPredicted RBP2.32□□□□□ -2.04
YSW1YBR148W YDR056CQ12025 205 aa2.32□□□□□ -2.04
YSW1YBR148W TYR1P20049 452 aa2.31□□□□□ -2.04
YSW1YBR148W ADH7P25377 361 aa2.31□□□□□ -2.04
YSW1YBR148W CMK1P27466 446 aaKnown RBP2.31□□□□□ -2.04
YSW1YBR148W SNC1P31109 117 aa2.31□□□□□ -2.04
YSW1YBR148W YOX1P34161 385 aa2.31□□□□□ -2.04
YSW1YBR148W ECM15P35195 104 aa2.31□□□□□ -2.04
YSW1YBR148W LAG1P38703 411 aa2.31□□□□□ -2.04
YSW1YBR148W KEL1P38853 1164 aaKnown RBP2.31□□□□□ -2.04
YSW1YBR148W YHR218WP38899 603 aa2.31□□□□□ -2.04
YSW1YBR148W VID27P40157 782 aa2.31□□□□□ -2.04
YSW1YBR148W YJL068CP40363 299 aa2.31□□□□□ -2.04
YSW1YBR148W DIM1P41819 318 aaKnown RBP2.31□□□□□ -2.04
YSW1YBR148W YFR016CP43597 1233 aaKnown RBP2.31□□□□□ -2.04
YSW1YBR148W IKS1P47042 667 aa2.31□□□□□ -2.04
YSW1YBR148W DSD1P53095 428 aa2.31□□□□□ -2.04
YSW1YBR148W DUO1P53168 247 aaKnown RBP2.31□□□□□ -2.04
YSW1YBR148W CRZ1P53968 678 aa2.31□□□□□ -2.04
YSW1YBR148W SSK1Q07084 712 aa2.31□□□□□ -2.04
YSW1YBR148W TLG2Q08144 397 aa2.31□□□□□ -2.04
YSW1YBR148W TCO89Q08921 799 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms