RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	URH1	Q04179	340 aa		7.03	□□□□□ -1.28
UBP13	YBL067C	ERV41	Q04651	352 aa		7.03	□□□□□ -1.28
UBP13	YBL067C	RTT103	Q05543	409 aa		7.03	□□□□□ -1.28
UBP13	YBL067C	VPS36	Q06696	566 aa		7.03	□□□□□ -1.28
UBP13	YBL067C	MET3	P08536	511 aa		7.02	□□□□□ -1.29
UBP13	YBL067C	PET122	P10355	254 aa		7.02	□□□□□ -1.29
UBP13	YBL067C	HMG2	P12684	1045 aa		7.02	□□□□□ -1.29
UBP13	YBL067C	UGA1	P17649	471 aa		7.02	□□□□□ -1.29
UBP13	YBL067C	YPK2	P18961	677 aa		7.02	□□□□□ -1.29
UBP13	YBL067C	RVS161	P25343	265 aa	Known RBP	7.02	□□□□□ -1.29
UBP13	YBL067C	MGR1	P25573	417 aa		7.02	□□□□□ -1.29
UBP13	YBL067C	IMP3	P32899	183 aa	Predicted RBP	7.02	□□□□□ -1.29
UBP13	YBL067C	KTR3	P38130	404 aa	Predicted RBP	7.02	□□□□□ -1.29
UBP13	YBL067C	POA1	P38218	177 aa		7.02	□□□□□ -1.29
UBP13	YBL067C	SEC31	P38968	1273 aa	Known RBP	7.02	□□□□□ -1.29
UBP13	YBL067C	BET4	Q00618	327 aa		7.02	□□□□□ -1.29
UBP13	YBL067C	ATG21	Q02887	496 aa		7.02	□□□□□ -1.29
UBP13	YBL067C	YPL277C	Q08989	487 aa		7.02	□□□□□ -1.29
UBP13	YBL067C	SSA3	P09435	649 aa	Known RBP	7.01	□□□□□ -1.29
UBP13	YBL067C	PRP45	P28004	379 aa	Predicted RBP	7.01	□□□□□ -1.29
UBP13	YBL067C	IDH2	P28241	369 aa	Known RBP	7.01	□□□□□ -1.29
UBP13	YBL067C	CBR1	P38626	284 aa	Known RBP	7.01	□□□□□ -1.29
UBP13	YBL067C	ZRG8	P40021	1076 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	TAH11	P47112	604 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	DBP6	P53734	629 aa	Known RBP	7.01	□□□□□ -1.29
UBP13	YBL067C	YDR239C	Q03780	787 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	YLR455W	Q06188	304 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	PPS1	P38148	807 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	NUP60	P39705	539 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	YNL195C	P40168	261 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	YJL132W	P47014	750 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	NET1	P47035	1189 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	DIA3	P52290	468 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	RMD9	P53140	646 aa	Known RBP	7.01	□□□□□ -1.29
UBP13	YBL067C	YGR066C	P53242	292 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	YGR126W	P53274	230 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	YNL035C	P53962	389 aa	Known RBP	7.01	□□□□□ -1.29
UBP13	YBL067C	YDR061W	Q12298	539 aa		7.01	□□□□□ -1.29
UBP13	YBL067C	KIN2	P13186	1147 aa	Known RBP	7	□□□□□ -1.29
UBP13	YBL067C	MEI5	P32489	222 aa		7	□□□□□ -1.29
UBP13	YBL067C	TIF3	P34167	436 aa	Known RBP	7	□□□□□ -1.29
UBP13	YBL067C	NUP133	P36161	1157 aa		7	□□□□□ -1.29
UBP13	YBL067C	FAD1	P38913	306 aa		7	□□□□□ -1.29
UBP13	YBL067C	TWF1	P53250	332 aa		7	□□□□□ -1.29
UBP13	YBL067C	ADE12	P80210	433 aa	Known RBP	7	□□□□□ -1.29
UBP13	YBL067C	RTT109	Q07794	436 aa		7	□□□□□ -1.29
UBP13	YBL067C	ABP140	Q08641	628 aa	Known RBP	7	□□□□□ -1.29
UBP13	YBL067C	RLM1	Q12224	676 aa		7	□□□□□ -1.29
UBP13	YBL067C	NBL1	Q3E7Y6	73 aa		7	□□□□□ -1.29
UBP13	YBL067C	CDC37	P06101	506 aa	Known RBP	7	□□□□□ -1.29
UBP13	YBL067C	ARD1	P07347	238 aa	Predicted RBP	7	□□□□□ -1.29
UBP13	YBL067C	RDS1	P25611	832 aa		7	□□□□□ -1.29
UBP13	YBL067C	TCD2	P36101	447 aa	Known RBP	7	□□□□□ -1.29
UBP13	YBL067C	AHP1	P38013	176 aa	Known RBP	7	□□□□□ -1.29
UBP13	YBL067C	YIR042C	P40586	236 aa		7	□□□□□ -1.29
UBP13	YBL067C	MIG2	P53035	382 aa		7	□□□□□ -1.29
UBP13	YBL067C	CRF1	Q04930	467 aa		7	□□□□□ -1.29
UBP13	YBL067C	RFA1	P22336	621 aa	Known RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	ADY2	P25613	283 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	SEC24	P40482	926 aa	Known RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	HXT14	P42833	540 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	GIM5	Q04493	163 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	VAC14	Q06708	880 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	CMS1	Q07897	291 aa	Known RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	PNO1	Q99216	274 aa	Known RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	GPM1	P00950	247 aa	Known RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	FRS1	P15624	595 aa	Known RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	MSB1	P21339	1137 aa	Known RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	OSM1	P21375	501 aa	Known RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	TCD1	P38756	429 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	FKH2	P41813	862 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	IME4	P41833	600 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	RPT4	P53549	437 aa	Known RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	GTO3	Q04806	366 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	GMC2	Q06201	188 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	CTS2	Q06350	511 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	YPR196W	Q06595	470 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	GPN2	Q08726	347 aa	Predicted RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	ATG31	Q12421	196 aa		6.99	□□□□□ -1.29
UBP13	YBL067C	RRP12	Q12754	1228 aa	Known RBP	6.99	□□□□□ -1.29
UBP13	YBL067C	ILV5	P06168	395 aa	Known RBP	6.98	□□□□□ -1.29
UBP13	YBL067C	GAL3	P13045	520 aa		6.98	□□□□□ -1.29
UBP13	YBL067C	BEM1	P29366	551 aa		6.98	□□□□□ -1.29
UBP13	YBL067C	NTH1	P32356	751 aa		6.98	□□□□□ -1.29
UBP13	YBL067C	RPN3	P40016	523 aa	Known RBP	6.98	□□□□□ -1.29
UBP13	YBL067C	VFA1	P40080	203 aa		6.98	□□□□□ -1.29
UBP13	YBL067C	MPS3	P47069	682 aa		6.98	□□□□□ -1.29
UBP13	YBL067C	GCV1	P48015	400 aa		6.98	□□□□□ -1.29
UBP13	YBL067C	DUS1	P53759	423 aa	Known RBP	6.98	□□□□□ -1.29
UBP13	YBL067C	STD1	Q02794	444 aa		6.98	□□□□□ -1.29
UBP13	YBL067C	IVY1	Q04934	453 aa		6.98	□□□□□ -1.29
UBP13	YBL067C	SYT1	Q06836	1226 aa		6.98	□□□□□ -1.29
UBP13	YBL067C	YFH1	Q07540	174 aa		6.98	□□□□□ -1.29
UBP13	YBL067C	PET18	P25362	215 aa		6.97	□□□□□ -1.29
UBP13	YBL067C	MRPL10	P36520	322 aa		6.97	□□□□□ -1.29
UBP13	YBL067C	CRG1	P38892	291 aa	RIP-Chip data	6.97	□□□□□ -1.29	RIP-Chip
UBP13	YBL067C	UBP9	P39967	754 aa		6.97	□□□□□ -1.29
UBP13	YBL067C	KTR5	P53966	522 aa	Predicted RBP	6.97	□□□□□ -1.29
UBP13	YBL067C	RSM28	Q03430	361 aa		6.97	□□□□□ -1.29
UBP13	YBL067C	GRE1	Q08969	168 aa		6.97	□□□□□ -1.29

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms