RNA–Protein interactions for RNA: YBL061C

SKT5, Transcript of Activator of Chs3p (chitin synthase III) during vegetative growth, yeast

Gene SKT5, Length 2,091 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKT5	YBL061C	RPO31	P04051	1460 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	PDE2	P06776	526 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	SNF1	P06782	633 aa	Known RBP	2.77	□□□□□ -1.97
SKT5	YBL061C	MIS1	P09440	975 aa	Known RBP	2.77	□□□□□ -1.97
SKT5	YBL061C	PRP16	P15938	1071 aa	Predicted RBP	2.77	□□□□□ -1.97
SKT5	YBL061C	PHO81	P17442	1178 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	DAP2	P18962	818 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	PRP2	P20095	876 aa	Predicted RBP	2.77	□□□□□ -1.97
SKT5	YBL061C	PRD1	P25375	712 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	NAM9	P27929	486 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	CAP1	P28495	268 aa	Known RBP	2.77	□□□□□ -1.97
SKT5	YBL061C	CBF2	P32504	956 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	YUH1	P35127	236 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	GLG1	P36143	616 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	NUP133	P36161	1157 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	SRL3	P36167	246 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	CHK1	P38147	527 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	APM3	P38153	483 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	VMA22	P38784	181 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	PRM9	P39551	298 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	AXL1	P40851	1208 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	THI6	P41835	540 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	GSM1	P42950	618 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	LOH1	P47055	219 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	KAP114	P53067	1004 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	PIB2	P53191	635 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	ESBP6	P53918	673 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	GTR1	Q00582	310 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	YMR114C	Q04471	368 aa	Known RBP	2.77	□□□□□ -1.97
SKT5	YBL061C	KAP95	Q06142	861 aa	Known RBP	2.77	□□□□□ -1.97
SKT5	YBL061C	ECM7	Q06200	448 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	CRD1	Q07560	283 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	DTD1	Q07648	150 aa	Known RBP	2.77	□□□□□ -1.97
SKT5	YBL061C	YEH2	Q07950	538 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	DSE3	Q08729	430 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	KEL3	Q08979	651 aa	Predicted RBP	2.77	□□□□□ -1.97
SKT5	YBL061C	ATP16	Q12165	160 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	RKI1	Q12189	258 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	AVL9	Q12500	764 aa		2.77	□□□□□ -1.97
SKT5	YBL061C	RPS7A	P26786	190 aa	Known RBP	2.76	□□□□□ -1.97
SKT5	YBL061C	KRE2	P27809	442 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	PRP45	P28004	379 aa	Predicted RBP	2.76	□□□□□ -1.97
SKT5	YBL061C	ITR2	P30606	609 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	ELF1	P36053	145 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	GMH1	P36125	273 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	CAF4	P36130	643 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	MMS4	P38257	691 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	UBS1	P38290	277 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	KSP1	P38691	1029 aa	Known RBP	2.76	□□□□□ -1.97
SKT5	YBL061C	STP2	P38704	541 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	PPE1	P38796	400 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	YHR097C	P38809	366 aa	Known RBP	2.76	□□□□□ -1.97
SKT5	YBL061C	SUR2	P38992	349 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	FLC2	P39719	783 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	YER186C	P40101	306 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	IMA5	P40884	581 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	LIA1	P47120	325 aa	Known RBP	2.76	□□□□□ -1.97
SKT5	YBL061C	YNR061C	P53747	219 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	KTR6	P54070	446 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	EFR3	Q03653	782 aa	Known RBP	2.76	□□□□□ -1.97
SKT5	YBL061C	RPN9	Q04062	393 aa	Known RBP	2.76	□□□□□ -1.97
SKT5	YBL061C	GRS2	Q06817	618 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	RRT8	Q08219	342 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	LAM4	P38800	1345 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	TUS1	Q06412	1307 aa		2.76	□□□□□ -1.97
SKT5	YBL061C	TRM3	Q07527	1436 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	FUS3	P16892	353 aa	Known RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	FUR1	P18562	216 aa	Known RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	DPB2	P24482	689 aa	Predicted RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	YCR016W	P25617	290 aa	Known RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	GDH2	P33327	1092 aa	Known RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	LOS1	P33418	1100 aa	Predicted RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	MRPL7	P36519	292 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	PCH2	P38126	564 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	RFC3	P38629	340 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	YJL206C	P39529	758 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	ACA1	P39970	489 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	THO1	P40040	218 aa	Known RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	SHQ1	P40486	507 aa	Predicted RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	IRC6	P43615	237 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	POL31	P46957	487 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	SNF12	P53628	566 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	MNT4	P53745	580 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	FIN1	Q03898	291 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	YLR455W	Q06188	304 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	CMS1	Q07897	291 aa	Known RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	THP3	Q12049	470 aa	Known RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	DAS2	Q12084	232 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	AEP3	Q12089	606 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	YDL109C	Q12103	647 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	MED2	Q12124	431 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	TAH18	Q12181	623 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	IES3	Q12345	250 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	HIS4	P00815	799 aa	Known RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	CAR2	P07991	424 aa	Known RBP	2.75	□□□□□ -1.97
SKT5	YBL061C	PCK1	P10963	549 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	VPS34	P22543	875 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	POT1	P27796	417 aa	Known RBP RIP-Chip data	2.75	□□□□□ -1.97	not detected
SKT5	YBL061C	DSS4	P32601	143 aa		2.75	□□□□□ -1.97
SKT5	YBL061C	LOT5	P34234	306 aa		2.75	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms