RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 GJA9P57773 515 aa8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 NKX3-2P78367 333 aa8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 RIF1Q5UIP0 2472 aaKnown RBP8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 TBC1D9Q6ZT07 1266 aa8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 MAPKAPK5Q8IW41 473 aa8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 MB21D1Q8N884 522 aa8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 TGFBRAP1Q8WUH2 860 aa8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 SLC9A7Q96T83 725 aa8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 CNPY2Q9Y2B0 182 aa8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 FOCADQ5VW36 1801 aa8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 USP34Q70CQ2 3546 aa8.84□□□□□ -0.99
PTCHD3P1-201ENST00000612350 SCN5AQ14524 2016 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 GRIN2DO15399 1336 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 FLT1P17948 1338 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 PROB1E7EW31 1015 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 PFKMP08237 780 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 GUCY1A2P33402 732 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 IRS1P35568 1242 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 PPP4CP60510 307 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 TIMM10P62072 90 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 PLS1Q14651 629 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 RAB3GAP1Q15042 981 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 HERC4Q5GLZ8 1057 aaPredicted RBP8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 HERC6Q8IVU3 1022 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 MSL3Q8N5Y2 521 aaKnown RBP8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 GDPD5Q8WTR4 605 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 MMP19Q99542 508 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 TRIM34Q9BYJ4 488 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 TRPV6Q9H1D0 765 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 SUGCTQ9HAC7 445 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 HMG20BQ9P0W2 317 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 PRKAG3Q9UGI9 489 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 KMT2EQ8IZD2 1858 aa8.83□□□□□ -1
PTCHD3P1-201ENST00000612350 PTPRSQ13332 1948 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 A0A1W2PRG0 241 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 B4GALT4O60513 344 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 RGS20O76081 388 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 SLC25A27O95847 323 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 TMEM132BQ14DG7 1078 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 GNASQ5JWF2 1037 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 KIAA1755Q5JYT7 1200 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 MAMDC4Q6UXC1 1216 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 ASCL5Q7RTU5 278 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 ADHFE1Q8IWW8 467 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 EDAQ92838 391 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 ATG4CQ96DT6 458 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 USP44Q9H0E7 712 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 SIL1Q9H173 461 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 AATFQ9NY61 560 aaKnown RBP eCLIP8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 SAP30BPQ9UHR5 308 aaKnown RBP8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 MUTYHQ9UIF7 546 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 ADAMTS5Q9UNA0 930 aa8.82□□□□□ -1
PTCHD3P1-201ENST00000612350 FANCIQ9NVI1 1328 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 TET1Q8NFU7 2136 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 LCHNA4D1U4 455 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 KIF28PB7ZC32 967 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 H3BQ06 376 aaPredicted RBP8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 ID4P47928 161 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 EXOSC9Q06265 439 aaKnown RBP8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 ITGA7Q13683 1181 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 PKN1Q16512 942 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 ABCB5Q2M3G0 1257 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 CXCL17Q6UXB2 119 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 PI16Q6UXB8 463 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 DEFB128Q7Z7B8 93 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 RIOX2Q8IUF8 465 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 PBXIP1Q96AQ6 731 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 UPF3BQ9BZI7 483 aaKnown RBP8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 TANGO6Q9C0B7 1094 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 RAI14Q9P0K7 980 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 COL11A1P12107 1806 aaPredicted RBP8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 PARP14Q460N5 1801 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 MCM3APO60318 1980 aa8.81□□□□□ -1
PTCHD3P1-201ENST00000612350 MED19A0JLT2 244 aaPredicted RBP8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 BAG3O95817 575 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 HLA-DOAP06340 250 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 IL15P40933 162 aaPredicted RBP8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 ERVK-21P61565 698 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 BEX3Q00994 111 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 ACVR2BQ13705 512 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 KCTD2Q14681 263 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 CCDC144BQ3MJ40 725 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 CERKLQ49MI3 558 aaPredicted RBP8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 VARS2Q5ST30 1063 aaKnown RBP8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 ATF7IPQ6VMQ6 1270 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 ADGRA1Q86SQ6 560 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 RNF135Q8IUD6 432 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 SPATA5Q8NB90 893 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 ATOH1Q92858 354 aaPredicted RBP8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 XAGE2Q96GT9 111 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 SEZ6LQ9BYH1 1024 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 SPC25Q9HBM1 224 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 ZHX1Q9UKY1 873 aaPredicted RBP8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 COL4A6Q14031 1691 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 MYH1P12882 1939 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 ASTN1O14525 1302 aa8.8□□□□□ -1
PTCHD3P1-201ENST00000612350 DNAJC25-GNG10A0A024R161 153 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 A0A1B0GUL7 405 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 TMEM221A6NGB7 291 aa8.79□□□□□ -1
PTCHD3P1-201ENST00000612350 M0R296 226 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms