RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 ICAM1P05362 532 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 PGK2P07205 417 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 ALAS1P13196 640 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 NFXL1Q6ZNB6 911 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 CATIPQ7Z7H3 387 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 ANKRD35Q8N283 1001 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 DDX11Q96FC9 970 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 TMEM87BQ96K49 555 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 NEK1Q96PY6 1258 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 UBA5Q9GZZ9 404 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 CPVLQ9H3G5 476 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 ACAD9Q9H845 621 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 SENP2Q9HC62 589 aa19.53■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 COBLO75128 1261 aa19.52■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 TKFCQ3LXA3 575 aa19.52■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 RASEFQ8IZ41 740 aa19.52■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 IGDCC4Q8TDY8 1250 aa19.52■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 MTA3Q9BTC8 594 aa19.52■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.52■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 LY9Q9HBG7 655 aa19.52■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 HMX1Q9NP08 348 aaPredicted RBP19.52■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 FLRT1Q9NZU1 646 aa19.52■□□□□ 0.72
TVP23C-CDRT4-204ENST00000557349 CCDC69A6NI79 296 aa19.51■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 SH2B2O14492 632 aaPredicted RBP19.51■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 HSPA4P34932 840 aa19.51■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 OLFML2BQ68BL8 750 aa19.51■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 NUP133Q8WUM0 1156 aa19.51■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 TRERF1Q96PN7 1200 aa19.51■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 PNMA2Q9UL42 364 aa19.51■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 RPTORQ8N122 1335 aa19.51■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 GJB1P08034 283 aa19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 TAL1P17542 331 aaPredicted RBP19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 EN2P19622 333 aaPredicted RBP19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 CYP2C19P33261 490 aa19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 CACNB2Q08289 660 aaPredicted RBP19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 GRM4Q14833 912 aa19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 CDC37Q16543 378 aaPredicted RBP19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 ADCK5Q3MIX3 580 aa19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 TSGA10IPQ3SY00 556 aa19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 ZNF654Q8IZM8 581 aa19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 MAML3Q96JK9 1138 aa19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 DEFB118Q96PH6 123 aa19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 LRRC2Q9BYS8 371 aa19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 GPHNQ9NQX3 736 aaPredicted RBP19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 WDR19Q8NEZ3 1342 aa19.5■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 KLRF2D3W0D1 207 aa19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 DDAH1O94760 285 aa19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 COL9A3Q14050 684 aaPredicted RBP19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 MAP3K21Q5TCX8 1036 aa19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 ADGRF4Q8IZF3 695 aa19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 TMTC2Q8N394 836 aa19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 STAG2Q8N3U4 1231 aa19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 U2AF1L4Q8WU68 220 aaKnown RBP19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 PAK6Q9NQU5 681 aaPredicted RBP19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 MAD2L2Q9UI95 211 aa19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 KIAA0100Q14667 2235 aaKnown RBP19.49■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 EPB41L2O43491 1005 aaKnown RBP19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 HMGB1P09429 215 aaKnown RBP19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 GJA8P48165 433 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 RGS19P49795 217 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 TROAPQ12815 778 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 ZNF792Q3KQV3 632 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 USH1GQ495M9 461 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 MUM1L1Q5H9M0 696 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 NSMFQ6X4W1 530 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 CTCFLQ8NI51 663 aaPredicted RBP19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 JAKMIP1Q96N16 626 aaKnown RBP19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 MYL10Q9BUA6 226 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 VAT1LQ9HCJ6 419 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 A1CFQ9NQ94 594 aaKnown RBP19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 DIS3Q9Y2L1 958 aaKnown RBP19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 SNX14Q9Y5W7 946 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 PFASO15067 1338 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 PLXNA1Q9UIW2 1896 aa19.48■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 CCND3P30281 292 aaPredicted RBP19.47■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 KIF5BP33176 963 aa19.47■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 LIFRP42702 1097 aa19.47■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 FGD1P98174 961 aa19.47■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 MLLT1Q03111 559 aaPredicted RBP19.47■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 TCEANC2Q96MN5 208 aa19.47■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 SLC12A7Q9Y666 1083 aa19.47■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 DNAJC25-GNG10A0A024R161 153 aa19.46■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 PALM3A6NDB9 673 aaPredicted RBP19.46■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 POTEB2H3BUK9 544 aa19.46■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 CNGA1P29973 690 aa19.46■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 QRICH1Q2TAL8 776 aa19.46■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 KCNB2Q92953 911 aa19.46■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 SHISA4Q96DD7 197 aa19.46■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 JMJD4Q9H9V9 463 aa19.46■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 ZNFX1Q9P2E3 1918 aaKnown RBP19.46■□□□□ 0.71
TVP23C-CDRT4-204ENST00000557349 NFIBO00712 420 aa19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 SGPL1O95470 568 aa19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 TFRCP02786 760 aaKnown RBP19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CALM1P0DP23 149 aa19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CALM2P0DP24 149 aa19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CALM3P0DP25 149 aa19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 CYBAP13498 195 aa19.45■□□□□ 0.7
TVP23C-CDRT4-204ENST00000557349 BLOC1S2Q6QNY1 142 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms