RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 PRDM15P57071 1507 aaPredicted RBP9.07□□□□□ -0.96
SYNE2-220ENST00000555612 ADGRL3Q9HAR2 1447 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 ABCC4O15439 1325 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 STAT2P52630 851 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 FANCCQ00597 558 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 ITIH3Q06033 890 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 DYNLL2Q96FJ2 89 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 ZBED2Q9BTP6 218 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 PI4KBQ9UBF8 816 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 ASIC3Q9UHC3 531 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 DBNLQ9UJU6 430 aaKnown RBP9.07□□□□□ -0.96
SYNE2-220ENST00000555612 PRKAB2O43741 272 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 ME3Q16798 604 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 DNAJC21Q5F1R6 531 aaKnown RBP9.07□□□□□ -0.96
SYNE2-220ENST00000555612 C4orf50Q6ZRC1 276 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 SLC7A3Q8WY07 619 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 NUP58Q9BVL2 599 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 COA1Q9GZY4 146 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 AFG3L2Q9Y4W6 797 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 UBN2Q6ZU65 1347 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 GIPC1O14908 333 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 CCND2P30279 289 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 ALDH3A1P30838 453 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 MIS18BP1Q6P0N0 1132 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 TRIM50Q86XT4 487 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 NLRP7Q8WX94 980 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 ZNF341Q9BYN7 854 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 RABGAP1Q9Y3P9 1069 aa9.07□□□□□ -0.96
SYNE2-220ENST00000555612 KRT81Q14533 505 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 MYSM1Q5VVJ2 828 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 TICAM2Q86XR7 235 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 CERKQ8TCT0 537 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 MICAL1Q8TDZ2 1067 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 PRDM10Q9NQV6 1147 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 ZNF277Q9NRM2 450 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-220ENST00000555612 PNMA3Q9UL41 463 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 HNRNPDLO14979 420 aaKnown RBP9.06□□□□□ -0.96
SYNE2-220ENST00000555612 MAGEA1P43355 309 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 NLRP12P59046 1061 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 LCORLQ8N3X6 602 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 POMGNT1Q8WZA1 660 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 MYL3P08590 195 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 AOC3Q16853 763 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 RRAGAQ7L523 313 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 U2AF1L4Q8WU68 220 aaKnown RBP9.06□□□□□ -0.96
SYNE2-220ENST00000555612 ZNF274Q96GC6 653 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-220ENST00000555612 ANTXR1Q9H6X2 564 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 KDM6BO15054 1643 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 CEP104O60308 925 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 SYDE2Q5VT97 1194 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 GJD4Q96KN9 370 aaPredicted RBP9.06□□□□□ -0.96
SYNE2-220ENST00000555612 PIGSQ96S52 555 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 COL4A3BPQ9Y5P4 624 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 MYO5CQ9NQX4 1742 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 ERVK-7P63135 1459 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 M0R2C6 588 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 STAM2O75886 525 aa9.06□□□□□ -0.96
SYNE2-220ENST00000555612 SECISBP2LQ93073 1101 aaKnown RBP9.06□□□□□ -0.96
SYNE2-220ENST00000555612 RIOK3O14730 519 aaKnown RBP9.05□□□□□ -0.96
SYNE2-220ENST00000555612 SYNMO15061 1565 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 SNAP25P60880 206 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 ODR4Q5SWX8 454 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 GALNT17Q6IS24 598 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 GIMAP7Q8NHV1 300 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 RASGRP4Q8TDF6 673 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 TRERF1Q96PN7 1200 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 PSMB7Q99436 277 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 ANAPC4Q9UJX5 808 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 KIAA1024Q9UPX6 916 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 BTBD18B2RXH4 712 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 DYNC1I1O14576 645 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 XPOTO43592 962 aaKnown RBP9.05□□□□□ -0.96
SYNE2-220ENST00000555612 ABCB4P21439 1286 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 LACTBP83111 547 aaPredicted RBP9.05□□□□□ -0.96
SYNE2-220ENST00000555612 ZNF215Q9UL58 517 aaPredicted RBP9.05□□□□□ -0.96
SYNE2-220ENST00000555612 AATKQ6ZMQ8 1374 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 ECE2O60344 883 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 GNA14O95837 355 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 PIK3CAP42336 1068 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 TXNRD1Q16881 649 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 TYW1BQ6NUM6 668 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 GOLGA5Q8TBA6 731 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 GJA10Q969M2 543 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 GMNNO75496 209 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 HSPA1LP34931 641 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 MECOMQ03112 1051 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 R3HDM1Q15032 1099 aaKnown RBP9.05□□□□□ -0.96
SYNE2-220ENST00000555612 PPP2R5AQ15172 486 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 PPM1KQ8N3J5 372 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 CCDC89Q8N998 374 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 JPH2Q9BR39 696 aaPredicted RBP9.05□□□□□ -0.96
SYNE2-220ENST00000555612 SEPT10Q9P0V9 454 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 NEURL4Q96JN8 1562 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 LMTK2Q8IWU2 1503 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 CYP2D7A0A087X1C5 515 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 ACTN4O43707 911 aaKnown RBP9.05□□□□□ -0.96
SYNE2-220ENST00000555612 PCP11498 1178 aaKnown RBP9.05□□□□□ -0.96
SYNE2-220ENST00000555612 HLFQ16534 295 aa9.05□□□□□ -0.96
SYNE2-220ENST00000555612 RSRC2Q7L4I2 434 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms