RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ALAS1P13196 640 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 EN2P19622 333 aaPredicted RBP14.14□□□□□ -0.15
SRP54-206ENST00000555317 SNAP25P60880 206 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 TTBK2Q6IQ55 1244 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 BTNL9Q6UXG8 535 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 STOX1Q6ZVD7 989 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 CHST3Q7LGC8 479 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 CATIPQ7Z7H3 387 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 DEFB118Q96PH6 123 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 RNF146Q9NTX7 359 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 TAF6LQ9Y6J9 622 aa14.14□□□□□ -0.15
SRP54-206ENST00000555317 MYH6P13533 1939 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 PRC1O43663 620 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 TFRCP02786 760 aaKnown RBP14.13□□□□□ -0.15
SRP54-206ENST00000555317 ICAM1P05362 532 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 PGK2P07205 417 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 TRIM32Q13049 653 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 KRT32Q14532 448 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 NECTIN1Q15223 517 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 SEC23AQ15436 765 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 OLFML2BQ68BL8 750 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 NFXL1Q6ZNB6 911 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 MB21D2Q8IYB1 491 aaPredicted RBP14.13□□□□□ -0.15
SRP54-206ENST00000555317 NPLOC4Q8TAT6 608 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 U2AF1L4Q8WU68 220 aaKnown RBP14.13□□□□□ -0.15
SRP54-206ENST00000555317 AGBL1Q96MI9 1066 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 TRERF1Q96PN7 1200 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 RANBP17Q9H2T7 1088 aaKnown RBP14.13□□□□□ -0.15
SRP54-206ENST00000555317 RIPK3Q9Y572 518 aa14.13□□□□□ -0.15
SRP54-206ENST00000555317 COBLO75128 1261 aa14.12□□□□□ -0.15
SRP54-206ENST00000555317 CAPN2P17655 700 aa14.12□□□□□ -0.15
SRP54-206ENST00000555317 CNGA1P29973 690 aa14.12□□□□□ -0.15
SRP54-206ENST00000555317 GJA8P48165 433 aa14.12□□□□□ -0.15
SRP54-206ENST00000555317 CACNB2Q08289 660 aaPredicted RBP14.12□□□□□ -0.15
SRP54-206ENST00000555317 MTA3Q9BTC8 594 aa14.12□□□□□ -0.15
SRP54-206ENST00000555317 PAK6Q9NQU5 681 aaPredicted RBP14.12□□□□□ -0.15
SRP54-206ENST00000555317 FLRT1Q9NZU1 646 aa14.12□□□□□ -0.15
SRP54-206ENST00000555317 PFASO15067 1338 aa14.12□□□□□ -0.15
SRP54-206ENST00000555317 TNRC18O15417 2968 aaPredicted RBP14.11□□□□□ -0.15
SRP54-206ENST00000555317 CCDC69A6NI79 296 aa14.11□□□□□ -0.15
SRP54-206ENST00000555317 SGPL1O95470 568 aa14.11□□□□□ -0.15
SRP54-206ENST00000555317 CYP2C19P33261 490 aa14.11□□□□□ -0.15
SRP54-206ENST00000555317 MAP3K21Q5TCX8 1036 aa14.11□□□□□ -0.15
SRP54-206ENST00000555317 TMTC2Q8N394 836 aa14.11□□□□□ -0.15
SRP54-206ENST00000555317 MAML3Q96JK9 1138 aa14.11□□□□□ -0.15
SRP54-206ENST00000555317 TMEM87BQ96K49 555 aa14.11□□□□□ -0.15
SRP54-206ENST00000555317 UBA5Q9GZZ9 404 aa14.11□□□□□ -0.15
SRP54-206ENST00000555317 DIS3Q9Y2L1 958 aaKnown RBP14.11□□□□□ -0.15
SRP54-206ENST00000555317 ZNF536O15090 1300 aa14.11□□□□□ -0.15
SRP54-206ENST00000555317 ANTXR2P58335 489 aa14.1□□□□□ -0.15
SRP54-206ENST00000555317 FGD1P98174 961 aa14.1□□□□□ -0.15
SRP54-206ENST00000555317 CDC37Q16543 378 aaPredicted RBP14.1□□□□□ -0.15
SRP54-206ENST00000555317 NSMFQ6X4W1 530 aa14.1□□□□□ -0.15
SRP54-206ENST00000555317 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.1□□□□□ -0.15
SRP54-206ENST00000555317 NUP133Q8WUM0 1156 aa14.1□□□□□ -0.15
SRP54-206ENST00000555317 NEK1Q96PY6 1258 aa14.1□□□□□ -0.15
SRP54-206ENST00000555317 CNPY2Q9Y2B0 182 aa14.1□□□□□ -0.15
SRP54-206ENST00000555317 WDR19Q8NEZ3 1342 aa14.1□□□□□ -0.15
SRP54-206ENST00000555317 MKI67P46013 3256 aaKnown RBP14.1□□□□□ -0.15
SRP54-206ENST00000555317 CEP290O15078 2479 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 BAZ2BQ9UIF8 2168 aaKnown RBP14.09□□□□□ -0.15
SRP54-206ENST00000555317 SMCHD1A6NHR9 2005 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 KLRF2D3W0D1 207 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 POTEB2H3BUK9 544 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 MSCO60682 206 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 FARP2O94887 1054 aaPredicted RBP14.09□□□□□ -0.15
SRP54-206ENST00000555317 HMGB1P09429 215 aaKnown RBP14.09□□□□□ -0.15
SRP54-206ENST00000555317 CCND3P30281 292 aaPredicted RBP14.09□□□□□ -0.15
SRP54-206ENST00000555317 KIF5BP33176 963 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 GRM4Q14833 912 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 ZNF792Q3KQV3 632 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 USH1GQ495M9 461 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 SYNE3Q6ZMZ3 975 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 ADGRF4Q8IZF3 695 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 MSL3Q8N5Y2 521 aaKnown RBP14.09□□□□□ -0.15
SRP54-206ENST00000555317 CTCFLQ8NI51 663 aaPredicted RBP14.09□□□□□ -0.15
SRP54-206ENST00000555317 IGDCC4Q8TDY8 1250 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 TINF2Q9BSI4 451 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 CPVLQ9H3G5 476 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 LY9Q9HBG7 655 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 VAT1LQ9HCJ6 419 aa14.09□□□□□ -0.15
SRP54-206ENST00000555317 A1CFQ9NQ94 594 aaKnown RBP14.09□□□□□ -0.15
SRP54-206ENST00000555317 PTPDC1A2A3K4 754 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 SH2B2O14492 632 aaPredicted RBP14.08□□□□□ -0.16
SRP54-206ENST00000555317 EIF5BO60841 1220 aaKnown RBP14.08□□□□□ -0.16
SRP54-206ENST00000555317 DDAH1O94760 285 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 CALM1P0DP23 149 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 CALM2P0DP24 149 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 CALM3P0DP25 149 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 ZNF654Q8IZM8 581 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 SHISA4Q96DD7 197 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 NRBP1Q9UHY1 535 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 MAD2L2Q9UI95 211 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 SLC12A7Q9Y666 1083 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 MCM3APO60318 1980 aa14.08□□□□□ -0.16
SRP54-206ENST00000555317 CYBAP13498 195 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 HSPA4P34932 840 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 LIFRP42702 1097 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 TRAF1Q13077 416 aa14.07□□□□□ -0.16
SRP54-206ENST00000555317 TSGA10IPQ3SY00 556 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms