RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 TSGA10IPQ3SY00 556 aa27.17■■□□□ 1.94
CPNE9-204ENST00000491802 TMEM87BQ96K49 555 aa27.17■■□□□ 1.94
CPNE9-204ENST00000491802 MMP19Q99542 508 aa27.17■■□□□ 1.94
CPNE9-204ENST00000491802 MTA3Q9BTC8 594 aa27.17■■□□□ 1.94
CPNE9-204ENST00000491802 LY9Q9HBG7 655 aa27.17■■□□□ 1.94
CPNE9-204ENST00000491802 GPHNQ9NQX3 736 aaPredicted RBP27.17■■□□□ 1.94
CPNE9-204ENST00000491802 SH2B2O14492 632 aaPredicted RBP27.16■■□□□ 1.94
CPNE9-204ENST00000491802 GJA8P48165 433 aa27.16■■□□□ 1.94
CPNE9-204ENST00000491802 CCL14Q16627 93 aa27.16■■□□□ 1.94
CPNE9-204ENST00000491802 KCNB2Q92953 911 aa27.16■■□□□ 1.94
CPNE9-204ENST00000491802 AGBL1Q96MI9 1066 aa27.16■■□□□ 1.94
CPNE9-204ENST00000491802 RNF208Q9H0X6 261 aa27.16■■□□□ 1.94
CPNE9-204ENST00000491802 UNC93B1Q9H1C4 597 aa27.16■■□□□ 1.94
CPNE9-204ENST00000491802 CPVLQ9H3G5 476 aa27.16■■□□□ 1.94
CPNE9-204ENST00000491802 HOMER2Q9NSB8 354 aa27.16■■□□□ 1.94
CPNE9-204ENST00000491802 PLXNA1Q9UIW2 1896 aa27.16■■□□□ 1.94
CPNE9-204ENST00000491802 KCTD2Q14681 263 aa27.15■■□□□ 1.94
CPNE9-204ENST00000491802 DPP9Q86TI2 863 aa27.15■■□□□ 1.94
CPNE9-204ENST00000491802 LRRC2Q9BYS8 371 aa27.15■■□□□ 1.94
CPNE9-204ENST00000491802 UBA5Q9GZZ9 404 aa27.15■■□□□ 1.94
CPNE9-204ENST00000491802 SLC5A4Q9NY91 659 aa27.15■■□□□ 1.94
CPNE9-204ENST00000491802 RPTORQ8N122 1335 aa27.15■■□□□ 1.94
CPNE9-204ENST00000491802 EPB41L2O43491 1005 aaKnown RBP27.14■■□□□ 1.94
CPNE9-204ENST00000491802 OLFML2BQ68BL8 750 aa27.14■■□□□ 1.94
CPNE9-204ENST00000491802 CATIPQ7Z7H3 387 aa27.14■■□□□ 1.94
CPNE9-204ENST00000491802 NPLOC4Q8TAT6 608 aa27.14■■□□□ 1.94
CPNE9-204ENST00000491802 CCPG1Q9ULG6 757 aa27.14■■□□□ 1.94
CPNE9-204ENST00000491802 SNX14Q9Y5W7 946 aa27.14■■□□□ 1.94
CPNE9-204ENST00000491802 COBLO75128 1261 aa27.13■■□□□ 1.93
CPNE9-204ENST00000491802 ICAM1P05362 532 aa27.13■■□□□ 1.93
CPNE9-204ENST00000491802 ALAS1P13196 640 aa27.13■■□□□ 1.93
CPNE9-204ENST00000491802 TAL1P17542 331 aaPredicted RBP27.13■■□□□ 1.93
CPNE9-204ENST00000491802 EN2P19622 333 aaPredicted RBP27.13■■□□□ 1.93
CPNE9-204ENST00000491802 TRIM32Q13049 653 aa27.13■■□□□ 1.93
CPNE9-204ENST00000491802 GRM4Q14833 912 aa27.13■■□□□ 1.93
CPNE9-204ENST00000491802 CHST13Q8NET6 341 aa27.13■■□□□ 1.93
CPNE9-204ENST00000491802 RNF146Q9NTX7 359 aa27.13■■□□□ 1.93
CPNE9-204ENST00000491802 FBXO40Q9UH90 709 aa27.13■■□□□ 1.93
CPNE9-204ENST00000491802 DIS3Q9Y2L1 958 aaKnown RBP27.13■■□□□ 1.93
CPNE9-204ENST00000491802 TROAPQ12815 778 aa27.12■■□□□ 1.93
CPNE9-204ENST00000491802 TKFCQ3LXA3 575 aa27.12■■□□□ 1.93
CPNE9-204ENST00000491802 NFXL1Q6ZNB6 911 aa27.12■■□□□ 1.93
CPNE9-204ENST00000491802 ZNF654Q8IZM8 581 aa27.12■■□□□ 1.93
CPNE9-204ENST00000491802 STAG2Q8N3U4 1231 aa27.12■■□□□ 1.93
CPNE9-204ENST00000491802 TCEANC2Q96MN5 208 aa27.12■■□□□ 1.93
CPNE9-204ENST00000491802 JAKMIP1Q96N16 626 aaKnown RBP27.12■■□□□ 1.93
CPNE9-204ENST00000491802 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.12■■□□□ 1.93
CPNE9-204ENST00000491802 ACAD9Q9H845 621 aa27.12■■□□□ 1.93
CPNE9-204ENST00000491802 HMX1Q9NP08 348 aaPredicted RBP27.12■■□□□ 1.93
CPNE9-204ENST00000491802 WDR19Q8NEZ3 1342 aa27.12■■□□□ 1.93
CPNE9-204ENST00000491802 DHX16O60231 1041 aaKnown RBP27.11■■□□□ 1.93
CPNE9-204ENST00000491802 SGPL1O95470 568 aa27.11■■□□□ 1.93
CPNE9-204ENST00000491802 PGK2P07205 417 aa27.11■■□□□ 1.93
CPNE9-204ENST00000491802 PRKAR2AP13861 404 aaKnown RBP27.11■■□□□ 1.93
CPNE9-204ENST00000491802 DHX32Q7L7V1 743 aaKnown RBP27.11■■□□□ 1.93
CPNE9-204ENST00000491802 NUP133Q8WUM0 1156 aa27.11■■□□□ 1.93
CPNE9-204ENST00000491802 SHISA4Q96DD7 197 aa27.11■■□□□ 1.93
CPNE9-204ENST00000491802 MYL10Q9BUA6 226 aa27.11■■□□□ 1.93
CPNE9-204ENST00000491802 USP26Q9BXU7 913 aa27.11■■□□□ 1.93
CPNE9-204ENST00000491802 FLRT1Q9NZU1 646 aa27.11■■□□□ 1.93
CPNE9-204ENST00000491802 MAD2L2Q9UI95 211 aa27.11■■□□□ 1.93
CPNE9-204ENST00000491802 TNRC18O15417 2968 aaPredicted RBP27.1■■□□□ 1.93
CPNE9-204ENST00000491802 PDE4DIPQ5VU43 2346 aa27.1■■□□□ 1.93
CPNE9-204ENST00000491802 PALM3A6NDB9 673 aaPredicted RBP27.1■■□□□ 1.93
CPNE9-204ENST00000491802 CCDC69A6NI79 296 aa27.1■■□□□ 1.93
CPNE9-204ENST00000491802 DDAH1O94760 285 aa27.1■■□□□ 1.93
CPNE9-204ENST00000491802 HMGB1P09429 215 aaKnown RBP27.1■■□□□ 1.93
CPNE9-204ENST00000491802 LIFRP42702 1097 aa27.1■■□□□ 1.93
CPNE9-204ENST00000491802 CACNB2Q08289 660 aaPredicted RBP27.1■■□□□ 1.93
CPNE9-204ENST00000491802 CDC37Q16543 378 aaPredicted RBP27.1■■□□□ 1.93
CPNE9-204ENST00000491802 MFSD14CQ5VZR4 134 aa27.1■■□□□ 1.93
CPNE9-204ENST00000491802 ADGRF4Q8IZF3 695 aa27.1■■□□□ 1.93
CPNE9-204ENST00000491802 U2AF1L4Q8WU68 220 aaKnown RBP27.1■■□□□ 1.93
CPNE9-204ENST00000491802 TRERF1Q96PN7 1200 aa27.1■■□□□ 1.93
CPNE9-204ENST00000491802 CRISPLD2Q9H0B8 497 aa27.1■■□□□ 1.93
CPNE9-204ENST00000491802 KLRF2D3W0D1 207 aa27.09■■□□□ 1.93
CPNE9-204ENST00000491802 EXOSC10Q01780 885 aaKnown RBP27.09■■□□□ 1.93
CPNE9-204ENST00000491802 ANKRD35Q8N283 1001 aa27.09■■□□□ 1.93
CPNE9-204ENST00000491802 TMTC2Q8N394 836 aa27.09■■□□□ 1.93
CPNE9-204ENST00000491802 PNMA2Q9UL42 364 aa27.09■■□□□ 1.93
CPNE9-204ENST00000491802 ZNF792Q3KQV3 632 aa27.08■■□□□ 1.93
CPNE9-204ENST00000491802 DDX11Q96FC9 970 aa27.08■■□□□ 1.93
CPNE9-204ENST00000491802 MAML3Q96JK9 1138 aa27.08■■□□□ 1.93
CPNE9-204ENST00000491802 MKI67P46013 3256 aaKnown RBP27.08■■□□□ 1.93
CPNE9-204ENST00000491802 SMCHD1A6NHR9 2005 aa27.07■■□□□ 1.92
CPNE9-204ENST00000491802 DNAJC25-GNG10A0A024R161 153 aa27.07■■□□□ 1.92
CPNE9-204ENST00000491802 CPA1P15085 419 aa27.07■■□□□ 1.92
CPNE9-204ENST00000491802 MUM1L1Q5H9M0 696 aa27.07■■□□□ 1.92
CPNE9-204ENST00000491802 BLOC1S2Q6QNY1 142 aa27.07■■□□□ 1.92
CPNE9-204ENST00000491802 JMJD4Q9H9V9 463 aa27.07■■□□□ 1.92
CPNE9-204ENST00000491802 VAT1LQ9HCJ6 419 aa27.07■■□□□ 1.92
CPNE9-204ENST00000491802 A1CFQ9NQ94 594 aaKnown RBP27.07■■□□□ 1.92
CPNE9-204ENST00000491802 SLC12A7Q9Y666 1083 aa27.07■■□□□ 1.92
CPNE9-204ENST00000491802 FRMPD3Q5JV73 1810 aa27.06■■□□□ 1.92
CPNE9-204ENST00000491802 SGMS1Q86VZ5 419 aa27.06■■□□□ 1.92
CPNE9-204ENST00000491802 MSL3Q8N5Y2 521 aaKnown RBP27.06■■□□□ 1.92
CPNE9-204ENST00000491802 CTCFLQ8NI51 663 aaPredicted RBP27.06■■□□□ 1.92
CPNE9-204ENST00000491802 DEFB118Q96PH6 123 aa27.06■■□□□ 1.92
CPNE9-204ENST00000491802 RXRAP19793 462 aa27.05■■□□□ 1.92
CPNE9-204ENST00000491802 CYP2C19P33261 490 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms