RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 CCPG1Q9ULG6 757 aa22.39■■□□□ 1.17
SNX17-206ENST00000484886 ZNFX1Q9P2E3 1918 aaKnown RBP22.39■■□□□ 1.17
SNX17-206ENST00000484886 NECTIN1Q15223 517 aa22.38■■□□□ 1.17
SNX17-206ENST00000484886 SEC23AQ15436 765 aa22.38■■□□□ 1.17
SNX17-206ENST00000484886 ASPRV1Q53RT3 343 aa22.38■■□□□ 1.17
SNX17-206ENST00000484886 MB21D2Q8IYB1 491 aaPredicted RBP22.38■■□□□ 1.17
SNX17-206ENST00000484886 ANKRD35Q8N283 1001 aa22.38■■□□□ 1.17
SNX17-206ENST00000484886 CHST13Q8NET6 341 aa22.38■■□□□ 1.17
SNX17-206ENST00000484886 U2AF1L4Q8WU68 220 aaKnown RBP22.38■■□□□ 1.17
SNX17-206ENST00000484886 RNF146Q9NTX7 359 aa22.38■■□□□ 1.17
SNX17-206ENST00000484886 DHX16O60231 1041 aaKnown RBP22.37■■□□□ 1.17
SNX17-206ENST00000484886 TFRCP02786 760 aaKnown RBP22.37■■□□□ 1.17
SNX17-206ENST00000484886 CYP2C19P33261 490 aa22.37■■□□□ 1.17
SNX17-206ENST00000484886 GJA8P48165 433 aa22.37■■□□□ 1.17
SNX17-206ENST00000484886 TRERF1Q96PN7 1200 aa22.37■■□□□ 1.17
SNX17-206ENST00000484886 UBA5Q9GZZ9 404 aa22.37■■□□□ 1.17
SNX17-206ENST00000484886 RANBP17Q9H2T7 1088 aaKnown RBP22.37■■□□□ 1.17
SNX17-206ENST00000484886 ACAD9Q9H845 621 aa22.37■■□□□ 1.17
SNX17-206ENST00000484886 PAK6Q9NQU5 681 aaPredicted RBP22.37■■□□□ 1.17
SNX17-206ENST00000484886 ZNF536O15090 1300 aa22.36■■□□□ 1.17
SNX17-206ENST00000484886 PRC1O43663 620 aa22.36■■□□□ 1.17
SNX17-206ENST00000484886 CNGA1P29973 690 aa22.36■■□□□ 1.17
SNX17-206ENST00000484886 MCM5P33992 734 aa22.36■■□□□ 1.17
SNX17-206ENST00000484886 ANTXR2P58335 489 aa22.36■■□□□ 1.17
SNX17-206ENST00000484886 TKFCQ3LXA3 575 aa22.36■■□□□ 1.17
SNX17-206ENST00000484886 MAP3K21Q5TCX8 1036 aa22.36■■□□□ 1.17
SNX17-206ENST00000484886 OLFML2BQ68BL8 750 aa22.36■■□□□ 1.17
SNX17-206ENST00000484886 MAML3Q96JK9 1138 aa22.36■■□□□ 1.17
SNX17-206ENST00000484886 CPVLQ9H3G5 476 aa22.36■■□□□ 1.17
SNX17-206ENST00000484886 PLXNA1Q9UIW2 1896 aa22.35■■□□□ 1.17
SNX17-206ENST00000484886 REC8O95072 547 aa22.35■■□□□ 1.17
SNX17-206ENST00000484886 SGPL1O95470 568 aa22.35■■□□□ 1.17
SNX17-206ENST00000484886 ICAM1P05362 532 aa22.35■■□□□ 1.17
SNX17-206ENST00000484886 CCND3P30281 292 aaPredicted RBP22.35■■□□□ 1.17
SNX17-206ENST00000484886 SHISA4Q96DD7 197 aa22.35■■□□□ 1.17
SNX17-206ENST00000484886 TAL1P17542 331 aaPredicted RBP22.34■■□□□ 1.17
SNX17-206ENST00000484886 NFXL1Q6ZNB6 911 aa22.34■■□□□ 1.17
SNX17-206ENST00000484886 CATIPQ7Z7H3 387 aa22.34■■□□□ 1.17
SNX17-206ENST00000484886 SENP2Q9HC62 589 aa22.34■■□□□ 1.17
SNX17-206ENST00000484886 ZNF792Q3KQV3 632 aa22.33■■□□□ 1.17
SNX17-206ENST00000484886 VAT1LQ9HCJ6 419 aa22.33■■□□□ 1.17
SNX17-206ENST00000484886 MUM1L1Q5H9M0 696 aa22.32■■□□□ 1.16
SNX17-206ENST00000484886 NSMFQ6X4W1 530 aa22.32■■□□□ 1.16
SNX17-206ENST00000484886 ADGRF4Q8IZF3 695 aa22.32■■□□□ 1.16
SNX17-206ENST00000484886 IGDCC4Q8TDY8 1250 aa22.32■■□□□ 1.16
SNX17-206ENST00000484886 PNMA2Q9UL42 364 aa22.32■■□□□ 1.16
SNX17-206ENST00000484886 DIS3Q9Y2L1 958 aaKnown RBP22.32■■□□□ 1.16
SNX17-206ENST00000484886 CCDC69A6NI79 296 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 POTEB2H3BUK9 544 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 FARP2O94887 1054 aaPredicted RBP22.31■■□□□ 1.16
SNX17-206ENST00000484886 KRT32Q14532 448 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 CDC37Q16543 378 aaPredicted RBP22.31■■□□□ 1.16
SNX17-206ENST00000484886 USH1GQ495M9 461 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.31■■□□□ 1.16
SNX17-206ENST00000484886 STAG2Q8N3U4 1231 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 NUP133Q8WUM0 1156 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 TMEM87BQ96K49 555 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 NEK1Q96PY6 1258 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 TINF2Q9BSI4 451 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 LRRC2Q9BYS8 371 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 LY9Q9HBG7 655 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 A1CFQ9NQ94 594 aaKnown RBP22.31■■□□□ 1.16
SNX17-206ENST00000484886 GPHNQ9NQX3 736 aaPredicted RBP22.31■■□□□ 1.16
SNX17-206ENST00000484886 PFASO15067 1338 aa22.31■■□□□ 1.16
SNX17-206ENST00000484886 KLRF2D3W0D1 207 aa22.3■■□□□ 1.16
SNX17-206ENST00000484886 CYBAP13498 195 aa22.3■■□□□ 1.16
SNX17-206ENST00000484886 GRM4Q14833 912 aa22.3■■□□□ 1.16
SNX17-206ENST00000484886 RASEFQ8IZ41 740 aa22.3■■□□□ 1.16
SNX17-206ENST00000484886 MTA3Q9BTC8 594 aa22.3■■□□□ 1.16
SNX17-206ENST00000484886 MAD2L2Q9UI95 211 aa22.3■■□□□ 1.16
SNX17-206ENST00000484886 CNPY2Q9Y2B0 182 aa22.3■■□□□ 1.16
SNX17-206ENST00000484886 DNAJC25-GNG10A0A024R161 153 aa22.29■■□□□ 1.16
SNX17-206ENST00000484886 SH2B2O14492 632 aaPredicted RBP22.29■■□□□ 1.16
SNX17-206ENST00000484886 PRAMEF19Q5SWL8 479 aa22.29■■□□□ 1.16
SNX17-206ENST00000484886 ZNF654Q8IZM8 581 aa22.29■■□□□ 1.16
SNX17-206ENST00000484886 TMTC2Q8N394 836 aa22.29■■□□□ 1.16
SNX17-206ENST00000484886 TRPV1Q8NER1 839 aa22.29■■□□□ 1.16
SNX17-206ENST00000484886 CRISPLD2Q9H0B8 497 aa22.29■■□□□ 1.16
SNX17-206ENST00000484886 WDR19Q8NEZ3 1342 aa22.29■■□□□ 1.16
SNX17-206ENST00000484886 PTPDC1A2A3K4 754 aa22.28■■□□□ 1.16
SNX17-206ENST00000484886 CAPN2P17655 700 aa22.28■■□□□ 1.16
SNX17-206ENST00000484886 CNTN2Q02246 1040 aa22.28■■□□□ 1.16
SNX17-206ENST00000484886 COL9A3Q14050 684 aaPredicted RBP22.28■■□□□ 1.16
SNX17-206ENST00000484886 CTCFLQ8NI51 663 aaPredicted RBP22.28■■□□□ 1.16
SNX17-206ENST00000484886 MYL10Q9BUA6 226 aa22.28■■□□□ 1.16
SNX17-206ENST00000484886 JMJD4Q9H9V9 463 aa22.28■■□□□ 1.16
SNX17-206ENST00000484886 DDX20Q9UHI6 824 aaKnown RBP22.28■■□□□ 1.16
SNX17-206ENST00000484886 PALM3A6NDB9 673 aaPredicted RBP22.27■■□□□ 1.16
SNX17-206ENST00000484886 SMCHD1A6NHR9 2005 aa22.27■■□□□ 1.16
SNX17-206ENST00000484886 NFIBO00712 420 aa22.27■■□□□ 1.16
SNX17-206ENST00000484886 MSCO60682 206 aa22.27■■□□□ 1.16
SNX17-206ENST00000484886 DDAH1O94760 285 aa22.27■■□□□ 1.16
SNX17-206ENST00000484886 IGHA2P01877 340 aa22.27■■□□□ 1.16
SNX17-206ENST00000484886 TROAPQ12815 778 aa22.27■■□□□ 1.16
SNX17-206ENST00000484886 QRICH1Q2TAL8 776 aa22.27■■□□□ 1.16
SNX17-206ENST00000484886 ADCK5Q3MIX3 580 aa22.27■■□□□ 1.16
SNX17-206ENST00000484886 MSL3Q8N5Y2 521 aaKnown RBP22.27■■□□□ 1.16
SNX17-206ENST00000484886 CYP39A1Q9NYL5 469 aa22.27■■□□□ 1.16
SNX17-206ENST00000484886 MYH6P13533 1939 aa22.27■■□□□ 1.16
SNX17-206ENST00000484886 BRCA2P51587 3418 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms