RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 PAK2Q13177 524 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 TRIM68Q6AZZ1 485 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 OR8K1Q8NGG5 319 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 UPF1Q92900 1129 aaKnown RBP eCLIP10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 TBC1D31Q96DN5 1066 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 UIMC1Q96RL1 719 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 TM6SF1Q9BZW5 370 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 RIPOR2Q9Y4F9 1068 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 IBTKQ9P2D0 1353 aaPredicted RBP10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 ADD1P35611 737 aaKnown RBP10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 GNAQP50148 359 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 ZNF131P52739 623 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 TYW1BQ6NUM6 668 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 C2orf69Q8N8R5 385 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 RABGGTAQ92696 567 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 AK9Q5TCS8 1911 aa10.8□□□□□ -0.68
MSC-AS1-201ENST00000457356 SNAP23O00161 211 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 NDUFA8P51970 172 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 KIF22Q14807 665 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 PODNQ7Z5L7 613 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 MIPOL1Q8TD10 442 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 TSGA10Q9BZW7 698 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 MTUS1Q9ULD2 1270 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 ACTN4O43707 911 aaKnown RBP10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 ECE2O60344 883 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 IFT88Q13099 833 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 PPP2R5AQ15172 486 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 CFAP221Q4G0U5 840 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 HS2ST1Q7LGA3 356 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 RPAINQ86UA6 219 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 PPP1R13BQ96KQ4 1090 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 EFCC1Q9HA90 598 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 FAM114A2Q9NRY5 505 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 PCDHA5Q9Y5H7 936 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 SIGLEC1Q9BZZ2 1709 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 H7C1W4 665 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 IGKV5-2P06315 115 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 SMARCC2Q8TAQ2 1214 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 CLIC6Q96NY7 704 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 IFIH1Q9BYX4 1025 aaKnown RBP10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 FTOQ9C0B1 505 aaKnown RBP eCLIP10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 SPOPO43791 374 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 BTDP43251 543 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 TRAF1Q13077 416 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 TRIM14Q14142 442 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 DPCR1Q3MIW9 517 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 C9orf131Q5VYM1 1079 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 RRAGAQ7L523 313 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 SP8Q8IXZ3 490 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 ERMNQ8TAM6 284 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 ANKRD7Q92527 254 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 PARD6BQ9BYG5 372 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 COPRSQ9NQ92 184 aa10.79□□□□□ -0.68
MSC-AS1-201ENST00000457356 C11orf57Q6ZUT1 292 aaPredicted RBP10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 ANKRD42Q8N9B4 389 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 FERMT2Q96AC1 680 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 JPH2Q9BR39 696 aaPredicted RBP10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 SYNCQ9H7C4 482 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 C6orf50Q9HD87 102 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 SWAP70Q9UH65 585 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 MINPP1Q9UNW1 487 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 UTP11Q9Y3A2 253 aaKnown RBP10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 GPAA1O43292 621 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 COBLO75128 1261 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 PNMA6AP0CW24 399 aaPredicted RBP10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 CTNNA1P35221 906 aaKnown RBP10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 PSMC4P43686 418 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 INTS5Q6P9B9 1019 aaKnown RBP10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 DYMQ7RTS9 669 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 CACNA2D3Q8IZS8 1091 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 TDRD7Q8NHU6 1098 aaKnown RBP10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 APPBP2Q92624 585 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 DDX12PQ92771 950 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 MCUR1Q96AQ8 359 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 BICD1Q96G01 975 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 ISCA1Q9BUE6 129 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 EHMT1Q9H9B1 1298 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 CDC23Q9UJX2 597 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 ZNF532Q9HCE3 1301 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 KIAA1210Q9ULL0 1709 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 CALM1P0DP23 149 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 CALM2P0DP24 149 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 CALM3P0DP25 149 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 TGFB2P61812 414 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 RPS6KA1Q15418 735 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 GADL1Q6ZQY3 521 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 KRT26Q7Z3Y9 468 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 FMNL3Q8IVF7 1028 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 CMTR1Q8N1G2 835 aaKnown RBP10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 SLC35F6Q8N357 371 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 KBTBD3Q8NAB2 608 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 RAB3IL1Q8TBN0 382 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 SLC10A4Q96EP9 437 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 CRAMP1Q96RY5 1269 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 COMMD10Q9Y6G5 202 aa10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 MORC2Q9Y6X9 1032 aaPredicted RBP10.78□□□□□ -0.68
MSC-AS1-201ENST00000457356 A0A0D9SFI3 127 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 TXNDC9O14530 226 aa10.77□□□□□ -0.68
MSC-AS1-201ENST00000457356 SASH1O94885 1247 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms