RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ADGRF4Q8IZF3 695 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 SOCS4Q8WXH5 440 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 VAT1LQ9HCJ6 419 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 HOMER2Q9NSB8 354 aa19.31■□□□□ 0.68
CXCL1-201ENST00000395761 KLRF2D3W0D1 207 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 COBLO75128 1261 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 DDAH1O94760 285 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 ICAM1P05362 532 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 FCER1AP12319 257 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 RXRAP19793 462 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 CASTP20810 708 aaKnown RBP19.3■□□□□ 0.68
CXCL1-201ENST00000395761 RPS6KB1P23443 525 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 PSMA5P28066 241 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 ADORA2AP29274 412 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 COPB2P35606 906 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 RGS2P41220 211 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 NBPF11Q86T75 865 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 SGMS1Q86VZ5 419 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 ARMC5Q96C12 935 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 MMP19Q99542 508 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 JMJD4Q9H9V9 463 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 BRPF3Q9ULD4 1205 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 SLC12A7Q9Y666 1083 aa19.3■□□□□ 0.68
CXCL1-201ENST00000395761 CCDC85CA6NKD9 419 aa19.29■□□□□ 0.68
CXCL1-201ENST00000395761 MYCP01106 439 aaPredicted RBP19.29■□□□□ 0.68
CXCL1-201ENST00000395761 PGK2P07205 417 aa19.29■□□□□ 0.68
CXCL1-201ENST00000395761 XRCC5P13010 732 aaKnown RBP19.29■□□□□ 0.68
CXCL1-201ENST00000395761 ALAS1P13196 640 aa19.29■□□□□ 0.68
CXCL1-201ENST00000395761 CCL14Q16627 93 aa19.29■□□□□ 0.68
CXCL1-201ENST00000395761 Q6ZUG5 572 aa19.29■□□□□ 0.68
CXCL1-201ENST00000395761 SLAIN1Q8ND83 568 aa19.29■□□□□ 0.68
CXCL1-201ENST00000395761 NPLOC4Q8TAT6 608 aa19.29■□□□□ 0.68
CXCL1-201ENST00000395761 PXYLP1Q8TE99 480 aa19.29■□□□□ 0.68
CXCL1-201ENST00000395761 ZSWIM6Q9HCJ5 1215 aa19.29■□□□□ 0.68
CXCL1-201ENST00000395761 CCPG1Q9ULG6 757 aa19.29■□□□□ 0.68
CXCL1-201ENST00000395761 DHX16O60231 1041 aaKnown RBP19.28■□□□□ 0.68
CXCL1-201ENST00000395761 HOXC6P09630 235 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 TRIM32Q13049 653 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 KCTD2Q14681 263 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 CDC37Q16543 378 aaPredicted RBP19.28■□□□□ 0.68
CXCL1-201ENST00000395761 MUM1L1Q5H9M0 696 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 DPP9Q86TI2 863 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 CCDC144CPQ8IYA2 1237 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 ABRAQ8N0Z2 381 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 CHST13Q8NET6 341 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 TRIB2Q92519 343 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 ZNF333Q96JL9 665 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 TRERF1Q96PN7 1200 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 APBA2Q99767 749 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 RNF146Q9NTX7 359 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 FLRT1Q9NZU1 646 aa19.28■□□□□ 0.68
CXCL1-201ENST00000395761 BIN2Q9UBW5 565 aaPredicted RBP19.28■□□□□ 0.68
CXCL1-201ENST00000395761 FGD1P98174 961 aa19.27■□□□□ 0.68
CXCL1-201ENST00000395761 RUFY3Q7L099 469 aa19.27■□□□□ 0.68
CXCL1-201ENST00000395761 MAP3K14Q99558 947 aa19.27■□□□□ 0.68
CXCL1-201ENST00000395761 UPF3BQ9BZI7 483 aaKnown RBP19.27■□□□□ 0.68
CXCL1-201ENST00000395761 TM6SF1Q9BZW5 370 aa19.27■□□□□ 0.68
CXCL1-201ENST00000395761 CYTH3O43739 400 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 CAPN15O75808 1086 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 INHAP05111 366 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 APOBRQ0VD83 1088 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 MTFR1Q15390 333 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 QRICH1Q2TAL8 776 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 TKFCQ3LXA3 575 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 APOA5Q6Q788 366 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.26■□□□□ 0.67
CXCL1-201ENST00000395761 MICU3Q86XE3 530 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 CTCFLQ8NI51 663 aaPredicted RBP19.26■□□□□ 0.67
CXCL1-201ENST00000395761 BRF1Q92994 677 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 MTMR8Q96EF0 704 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 RIOX1Q9H6W3 641 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 ACAD9Q9H845 621 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 FBXO40Q9UH90 709 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 CYP46A1Q9Y6A2 500 aa19.26■□□□□ 0.67
CXCL1-201ENST00000395761 KLF18A0A0U1RQI7 1052 aa19.25■□□□□ 0.67
CXCL1-201ENST00000395761 PLEKHA8P1O95397 391 aa19.25■□□□□ 0.67
CXCL1-201ENST00000395761 HMGCRP04035 888 aa19.25■□□□□ 0.67
CXCL1-201ENST00000395761 CALM1P0DP23 149 aa19.25■□□□□ 0.67
CXCL1-201ENST00000395761 CALM2P0DP24 149 aa19.25■□□□□ 0.67
CXCL1-201ENST00000395761 CALM3P0DP25 149 aa19.25■□□□□ 0.67
CXCL1-201ENST00000395761 KIF5BP33176 963 aa19.25■□□□□ 0.67
CXCL1-201ENST00000395761 SYNE3Q6ZMZ3 975 aa19.25■□□□□ 0.67
CXCL1-201ENST00000395761 CMTR1Q8N1G2 835 aaKnown RBP19.25■□□□□ 0.67
CXCL1-201ENST00000395761 FANCBQ8NB91 859 aa19.25■□□□□ 0.67
CXCL1-201ENST00000395761 PIGSQ96S52 555 aa19.25■□□□□ 0.67
CXCL1-201ENST00000395761 SMCHD1A6NHR9 2005 aa19.24■□□□□ 0.67
CXCL1-201ENST00000395761 ZBTB43O43298 467 aa19.24■□□□□ 0.67
CXCL1-201ENST00000395761 ANAPC15P60006 121 aa19.24■□□□□ 0.67
CXCL1-201ENST00000395761 ZNF792Q3KQV3 632 aa19.24■□□□□ 0.67
CXCL1-201ENST00000395761 USH1GQ495M9 461 aa19.24■□□□□ 0.67
CXCL1-201ENST00000395761 ANKRD35Q8N283 1001 aa19.24■□□□□ 0.67
CXCL1-201ENST00000395761 FBXL16Q8N461 479 aa19.24■□□□□ 0.67
CXCL1-201ENST00000395761 SRBD1Q8N5C6 995 aaKnown RBP19.24■□□□□ 0.67
CXCL1-201ENST00000395761 CLEC4DQ8WXI8 215 aa19.24■□□□□ 0.67
CXCL1-201ENST00000395761 DDX11Q96FC9 970 aa19.24■□□□□ 0.67
CXCL1-201ENST00000395761 AGXT2Q9BYV1 514 aa19.24■□□□□ 0.67
CXCL1-201ENST00000395761 A1CFQ9NQ94 594 aaKnown RBP19.24■□□□□ 0.67
CXCL1-201ENST00000395761 ZNF236Q9UL36 1845 aa19.23■□□□□ 0.67
CXCL1-201ENST00000395761 DNAJC25-GNG10A0A024R161 153 aa19.23■□□□□ 0.67
CXCL1-201ENST00000395761 NFIBO00712 420 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms