RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 ALAS1P13196 640 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 ANTXR2P58335 489 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 SNAP25P60880 206 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 TRIM32Q13049 653 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 KRT32Q14532 448 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 TKFCQ3LXA3 575 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 NPLOC4Q8TAT6 608 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 DDX11Q96FC9 970 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 TMEM87BQ96K49 555 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 AGBL1Q96MI9 1066 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDAC8-201ENST00000373554 RNF146Q9NTX7 359 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 PNMA2Q9UL42 364 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 ZNF536O15090 1300 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 RPTORQ8N122 1335 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 CENPFP49454 3210 aa14.04□□□□□ -0.16
HDAC8-201ENST00000373554 DHX16O60231 1041 aaKnown RBP14.03□□□□□ -0.16
HDAC8-201ENST00000373554 COBLO75128 1261 aa14.03□□□□□ -0.16
HDAC8-201ENST00000373554 PGK2P07205 417 aa14.03□□□□□ -0.16
HDAC8-201ENST00000373554 MAP3K21Q5TCX8 1036 aa14.03□□□□□ -0.16
HDAC8-201ENST00000373554 OLFML2BQ68BL8 750 aa14.03□□□□□ -0.16
HDAC8-201ENST00000373554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.03□□□□□ -0.16
HDAC8-201ENST00000373554 CATIPQ7Z7H3 387 aa14.03□□□□□ -0.16
HDAC8-201ENST00000373554 ANKRD35Q8N283 1001 aa14.03□□□□□ -0.16
HDAC8-201ENST00000373554 PAK6Q9NQU5 681 aaPredicted RBP14.03□□□□□ -0.16
HDAC8-201ENST00000373554 FLRT1Q9NZU1 646 aa14.03□□□□□ -0.16
HDAC8-201ENST00000373554 WDR19Q8NEZ3 1342 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 EPB41L2O43491 1005 aaKnown RBP14.02□□□□□ -0.17
HDAC8-201ENST00000373554 EN2P19622 333 aaPredicted RBP14.02□□□□□ -0.17
HDAC8-201ENST00000373554 HSPA4P34932 840 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 GJA8P48165 433 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 CACNB2Q08289 660 aaPredicted RBP14.02□□□□□ -0.17
HDAC8-201ENST00000373554 TSGA10IPQ3SY00 556 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 NFXL1Q6ZNB6 911 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 TMTC2Q8N394 836 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 IGDCC4Q8TDY8 1250 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 U2AF1L4Q8WU68 220 aaKnown RBP14.02□□□□□ -0.17
HDAC8-201ENST00000373554 MAML3Q96JK9 1138 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 DEFB118Q96PH6 123 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 TRERF1Q96PN7 1200 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 NEK1Q96PY6 1258 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 UBA5Q9GZZ9 404 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 LY9Q9HBG7 655 aa14.02□□□□□ -0.17
HDAC8-201ENST00000373554 DIS3Q9Y2L1 958 aaKnown RBP14.02□□□□□ -0.17
HDAC8-201ENST00000373554 TNRC18O15417 2968 aaPredicted RBP14.02□□□□□ -0.17
HDAC8-201ENST00000373554 PFASO15067 1338 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 CCDC69A6NI79 296 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 KLRF2D3W0D1 207 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 SH2B2O14492 632 aaPredicted RBP14.01□□□□□ -0.17
HDAC8-201ENST00000373554 DDAH1O94760 285 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 HMGB1P09429 215 aaKnown RBP14.01□□□□□ -0.17
HDAC8-201ENST00000373554 CYP2C19P33261 490 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 GRM4Q14833 912 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 CDC37Q16543 378 aaPredicted RBP14.01□□□□□ -0.17
HDAC8-201ENST00000373554 ZNF792Q3KQV3 632 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 RASEFQ8IZ41 740 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 ADGRF4Q8IZF3 695 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 ZNF654Q8IZM8 581 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 CPVLQ9H3G5 476 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 SENP2Q9HC62 589 aa14.01□□□□□ -0.17
HDAC8-201ENST00000373554 A1CFQ9NQ94 594 aaKnown RBP14.01□□□□□ -0.17
HDAC8-201ENST00000373554 DNAJC25-GNG10A0A024R161 153 aa14□□□□□ -0.17
HDAC8-201ENST00000373554 SGPL1O95470 568 aa14□□□□□ -0.17
HDAC8-201ENST00000373554 CAPN2P17655 700 aa14□□□□□ -0.17
HDAC8-201ENST00000373554 LIFRP42702 1097 aa14□□□□□ -0.17
HDAC8-201ENST00000373554 TROAPQ12815 778 aa14□□□□□ -0.17
HDAC8-201ENST00000373554 DHX32Q7L7V1 743 aaKnown RBP14□□□□□ -0.17
HDAC8-201ENST00000373554 STAG2Q8N3U4 1231 aa14□□□□□ -0.17
HDAC8-201ENST00000373554 MSL3Q8N5Y2 521 aaKnown RBP14□□□□□ -0.17
HDAC8-201ENST00000373554 CTCFLQ8NI51 663 aaPredicted RBP14□□□□□ -0.17
HDAC8-201ENST00000373554 NUP133Q8WUM0 1156 aa14□□□□□ -0.17
HDAC8-201ENST00000373554 GPHNQ9NQX3 736 aaPredicted RBP14□□□□□ -0.17
HDAC8-201ENST00000373554 MAD2L2Q9UI95 211 aa14□□□□□ -0.17
HDAC8-201ENST00000373554 KIAA0100Q14667 2235 aaKnown RBP14□□□□□ -0.17
HDAC8-201ENST00000373554 PALM3A6NDB9 673 aaPredicted RBP13.99□□□□□ -0.17
HDAC8-201ENST00000373554 POTEB2H3BUK9 544 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 CALM1P0DP23 149 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 CALM2P0DP24 149 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 CALM3P0DP25 149 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 CYBAP13498 195 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 CNGA1P29973 690 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 CCND3P30281 292 aaPredicted RBP13.99□□□□□ -0.17
HDAC8-201ENST00000373554 KIF5BP33176 963 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 ADCK5Q3MIX3 580 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 MUM1L1Q5H9M0 696 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 NSMFQ6X4W1 530 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 ZNF467Q7Z7K2 595 aaPredicted RBP13.99□□□□□ -0.17
HDAC8-201ENST00000373554 KCNB2Q92953 911 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 SHISA4Q96DD7 197 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 MAP3K14Q99558 947 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 TINF2Q9BSI4 451 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 LRRC2Q9BYS8 371 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 VAT1LQ9HCJ6 419 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 SNX14Q9Y5W7 946 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 SLC12A7Q9Y666 1083 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 PLXNA1Q9UIW2 1896 aa13.99□□□□□ -0.17
HDAC8-201ENST00000373554 PDE4DIPQ5VU43 2346 aa13.98□□□□□ -0.17
HDAC8-201ENST00000373554 MSCO60682 206 aa13.98□□□□□ -0.17
HDAC8-201ENST00000373554 EIF5BO60841 1220 aaKnown RBP13.98□□□□□ -0.17
HDAC8-201ENST00000373554 IGHA2P01877 340 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms