RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 DDX49Q9Y6V7 483 aaKnown RBP11.12□□□□□ -0.63
TMEM254-201ENST00000372273 MYH4Q9Y623 1939 aa11.11□□□□□ -0.63
TMEM254-201ENST00000372273 RANBP2P49792 3224 aaKnown RBP11.11□□□□□ -0.63
TMEM254-201ENST00000372273 KLRF2D3W0D1 207 aa11.11□□□□□ -0.63
TMEM254-201ENST00000372273 CYTH3O43739 400 aa11.11□□□□□ -0.63
TMEM254-201ENST00000372273 DHX16O60231 1041 aaKnown RBP11.11□□□□□ -0.63
TMEM254-201ENST00000372273 PGK2P07205 417 aa11.11□□□□□ -0.63
TMEM254-201ENST00000372273 PARP1P09874 1014 aaKnown RBP11.11□□□□□ -0.63
TMEM254-201ENST00000372273 ELNP15502 786 aa11.11□□□□□ -0.63
TMEM254-201ENST00000372273 CUL4AQ13619 759 aa11.11□□□□□ -0.63
TMEM254-201ENST00000372273 KIF22Q14807 665 aa11.11□□□□□ -0.63
TMEM254-201ENST00000372273 NOL8Q76FK4 1167 aaKnown RBP11.11□□□□□ -0.63
TMEM254-201ENST00000372273 CTU1Q7Z7A3 348 aaKnown RBP11.11□□□□□ -0.63
TMEM254-201ENST00000372273 ADGRF4Q8IZF3 695 aa11.11□□□□□ -0.63
TMEM254-201ENST00000372273 ZNF654Q8IZM8 581 aa11.11□□□□□ -0.63
TMEM254-201ENST00000372273 CCDC69A6NI79 296 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 PLEKHA8P1O95397 391 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 CYP2B6P20813 491 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 RPS6KB1P23443 525 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 FCGRTP55899 365 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 FGD1P98174 961 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 KRT32Q14532 448 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 KLHL40Q2TBA0 621 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 PPP4R3BQ5MIZ7 849 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 SYDE2Q5VT97 1194 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 RUFY3Q7L099 469 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 PURBQ96QR8 312 aaKnown RBP11.1□□□□□ -0.63
TMEM254-201ENST00000372273 GJD2Q9UKL4 321 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 SYNPO2Q9UMS6 1093 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 SLC12A7Q9Y666 1083 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 RLFQ13129 1914 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 LAMA3Q16787 3333 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 TOB2Q14106 344 aaPredicted RBP11.1□□□□□ -0.63
TMEM254-201ENST00000372273 CCL14Q16627 93 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 USH1GQ495M9 461 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 HOMER1Q86YM7 354 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 TNS4Q8IZW8 715 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 CHURC1Q8WUH1 139 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 TMEM87BQ96K49 555 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 ZSWIM6Q9HCJ5 1215 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 SRRDQ9UH36 339 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 PTPN22Q9Y2R2 807 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 DOCK3Q8IZD9 2030 aa11.1□□□□□ -0.63
TMEM254-201ENST00000372273 MYPNQ86TC9 1320 aa11.09□□□□□ -0.63
TMEM254-201ENST00000372273 KLF18A0A0U1RQI7 1052 aa11.09□□□□□ -0.63
TMEM254-201ENST00000372273 PALM3A6NDB9 673 aaPredicted RBP11.09□□□□□ -0.63
TMEM254-201ENST00000372273 LIFRP42702 1097 aa11.09□□□□□ -0.63
TMEM254-201ENST00000372273 TRIM32Q13049 653 aa11.09□□□□□ -0.63
TMEM254-201ENST00000372273 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
TMEM254-201ENST00000372273 MUM1L1Q5H9M0 696 aa11.09□□□□□ -0.63
TMEM254-201ENST00000372273 APOA5Q6Q788 366 aa11.09□□□□□ -0.63
TMEM254-201ENST00000372273 JMJD4Q9H9V9 463 aa11.09□□□□□ -0.63
TMEM254-201ENST00000372273 CTDP1Q9Y5B0 961 aaPredicted RBP11.09□□□□□ -0.63
TMEM254-201ENST00000372273 BAZ2BQ9UIF8 2168 aaKnown RBP11.09□□□□□ -0.63
TMEM254-201ENST00000372273 PPP1R11O60927 126 aaPredicted RBP11.08□□□□□ -0.63
TMEM254-201ENST00000372273 COBLO75128 1261 aa11.08□□□□□ -0.63
TMEM254-201ENST00000372273 ZBED4O75132 1171 aa11.08□□□□□ -0.63
TMEM254-201ENST00000372273 ALAS1P13196 640 aa11.08□□□□□ -0.63
TMEM254-201ENST00000372273 CDC27P30260 824 aa11.08□□□□□ -0.63
TMEM254-201ENST00000372273 PKP1Q13835 747 aa11.08□□□□□ -0.63
TMEM254-201ENST00000372273 GPATCH4Q5T3I0 446 aaKnown RBP11.08□□□□□ -0.63
TMEM254-201ENST00000372273 BTNL9Q6UXG8 535 aa11.08□□□□□ -0.63
TMEM254-201ENST00000372273 SRBD1Q8N5C6 995 aaKnown RBP11.08□□□□□ -0.63
TMEM254-201ENST00000372273 MB21D1Q8N884 522 aa11.08□□□□□ -0.63
TMEM254-201ENST00000372273 COA7Q96BR5 231 aa11.08□□□□□ -0.63
TMEM254-201ENST00000372273 TEX13BQ9BXU2 312 aa11.08□□□□□ -0.63
TMEM254-201ENST00000372273 NCOA5Q9HCD5 579 aaKnown RBP11.08□□□□□ -0.63
TMEM254-201ENST00000372273 HMGB1P09429 215 aaKnown RBP11.08□□□□□ -0.64
TMEM254-201ENST00000372273 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
TMEM254-201ENST00000372273 ADORA2AP29274 412 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 ADD1P35611 737 aaKnown RBP11.08□□□□□ -0.64
TMEM254-201ENST00000372273 CCT2P78371 535 aaKnown RBP11.08□□□□□ -0.64
TMEM254-201ENST00000372273 STK3Q13188 491 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 GRM4Q14833 912 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 CDC37Q16543 378 aaPredicted RBP11.08□□□□□ -0.64
TMEM254-201ENST00000372273 PLEKHH3Q7Z736 793 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 FAM160B2Q86V87 743 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 SGMS1Q86VZ5 419 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 FANCBQ8NB91 859 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 RAET1EQ8TD07 263 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 TBC1D5Q92609 795 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 PIGSQ96S52 555 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 GRPEL1Q9HAV7 217 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 FLRT1Q9NZU1 646 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 CCPG1Q9ULG6 757 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 CYP46A1Q9Y6A2 500 aa11.08□□□□□ -0.64
TMEM254-201ENST00000372273 NFIBO00712 420 aa11.07□□□□□ -0.64
TMEM254-201ENST00000372273 PSMA5P28066 241 aa11.07□□□□□ -0.64
TMEM254-201ENST00000372273 MAPK4P31152 587 aa11.07□□□□□ -0.64
TMEM254-201ENST00000372273 CCNA1P78396 465 aa11.07□□□□□ -0.64
TMEM254-201ENST00000372273 ASPRV1Q53RT3 343 aa11.07□□□□□ -0.64
TMEM254-201ENST00000372273 RIOX2Q8IUF8 465 aa11.07□□□□□ -0.64
TMEM254-201ENST00000372273 NPLOC4Q8TAT6 608 aa11.07□□□□□ -0.64
TMEM254-201ENST00000372273 RANBP17Q9H2T7 1088 aaKnown RBP11.07□□□□□ -0.64
TMEM254-201ENST00000372273 FAM217BQ9NTX9 383 aaPredicted RBP11.07□□□□□ -0.64
TMEM254-201ENST00000372273 PDRG1Q9NUG6 133 aa11.07□□□□□ -0.64
TMEM254-201ENST00000372273 SMCHD1A6NHR9 2005 aa11.07□□□□□ -0.64
TMEM254-201ENST00000372273 CAPN15O75808 1086 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms