RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W LSB6P42951 607 aa5.82□□□□□ -1.48
RPN7YPR108W RBL2P48606 106 aaKnown RBP5.82□□□□□ -1.48
RPN7YPR108W FOL2P51601 243 aaKnown RBP5.82□□□□□ -1.48
RPN7YPR108W MET13P53128 600 aa5.82□□□□□ -1.48
RPN7YPR108W YGR016WP53209 190 aa5.82□□□□□ -1.48
RPN7YPR108W CLD1P53264 445 aa5.82□□□□□ -1.48
RPN7YPR108W YNR063WP53749 607 aa5.82□□□□□ -1.48
RPN7YPR108W TMA20P89886 181 aaPredicted RBP5.82□□□□□ -1.48
RPN7YPR108W PRP3Q03338 469 aaPredicted RBP5.82□□□□□ -1.48
RPN7YPR108W YMR155WQ03795 547 aa5.82□□□□□ -1.48
RPN7YPR108W YMR160WQ03823 816 aa5.82□□□□□ -1.48
RPN7YPR108W PPN1Q04119 674 aa5.82□□□□□ -1.48
RPN7YPR108W DYN3Q04949 312 aa5.82□□□□□ -1.48
RPN7YPR108W ARP9Q05123 467 aa5.82□□□□□ -1.48
RPN7YPR108W SGT1Q08446 395 aa5.82□□□□□ -1.48
RPN7YPR108W SNX3Q08826 162 aaKnown RBP5.82□□□□□ -1.48
RPN7YPR108W MSS18P08593 268 aa5.81□□□□□ -1.48
RPN7YPR108W TOP3P13099 656 aa5.81□□□□□ -1.48
RPN7YPR108W KSS1P14681 368 aa5.81□□□□□ -1.48
RPN7YPR108W FAR1P21268 830 aa5.81□□□□□ -1.48
RPN7YPR108W UBA1P22515 1024 aaKnown RBP5.81□□□□□ -1.48
RPN7YPR108W VPS34P22543 875 aa5.81□□□□□ -1.48
RPN7YPR108W MNE1P24720 663 aa5.81□□□□□ -1.48
RPN7YPR108W DCC1P25559 380 aa5.81□□□□□ -1.48
RPN7YPR108W SYN8P31377 255 aa5.81□□□□□ -1.48
RPN7YPR108W SRP101P32916 621 aa5.81□□□□□ -1.48
RPN7YPR108W SKT5P34226 696 aa5.81□□□□□ -1.48
RPN7YPR108W YBR284WP38150 797 aa5.81□□□□□ -1.48
RPN7YPR108W YHI9P38765 294 aa5.81□□□□□ -1.48
RPN7YPR108W JHD1P40034 492 aa5.81□□□□□ -1.48
RPN7YPR108W THO1P40040 218 aaKnown RBP5.81□□□□□ -1.48
RPN7YPR108W PDS1P40316 373 aaPredicted RBP5.81□□□□□ -1.48
RPN7YPR108W ALG8P40351 577 aa5.81□□□□□ -1.48
RPN7YPR108W UBP7P40453 1071 aa5.81□□□□□ -1.48
RPN7YPR108W RIM21P48565 533 aa5.81□□□□□ -1.48
RPN7YPR108W IMA1P53051 589 aa5.81□□□□□ -1.48
RPN7YPR108W SPC105P53148 917 aa5.81□□□□□ -1.48
RPN7YPR108W YGR053CP53234 283 aa5.81□□□□□ -1.48
RPN7YPR108W SHY1P53266 389 aa5.81□□□□□ -1.48
RPN7YPR108W UTP8P53276 713 aaKnown RBP5.81□□□□□ -1.48
RPN7YPR108W YNL260CP53846 198 aa5.81□□□□□ -1.48
RPN7YPR108W IBD2P53892 351 aa5.81□□□□□ -1.48
RPN7YPR108W YNL143CP53908 130 aa5.81□□□□□ -1.48
RPN7YPR108W ASI1P54074 624 aa5.81□□□□□ -1.48
RPN7YPR108W ORC3P54790 616 aa5.81□□□□□ -1.48
RPN7YPR108W UGO1Q03327 502 aa5.81□□□□□ -1.48
RPN7YPR108W NSE5Q03718 556 aa5.81□□□□□ -1.48
RPN7YPR108W RTN1Q04947 295 aaKnown RBP5.81□□□□□ -1.48
RPN7YPR108W ECM38Q05902 660 aaPredicted RBP5.81□□□□□ -1.48
RPN7YPR108W MCH5Q08777 521 aa5.81□□□□□ -1.48
RPN7YPR108W IES3Q12345 250 aa5.81□□□□□ -1.48
RPN7YPR108W NDJ1Q12366 352 aa5.81□□□□□ -1.48
RPN7YPR108W OCA6Q12454 224 aa5.81□□□□□ -1.48
RPN7YPR108W FRT1Q99332 602 aa5.81□□□□□ -1.48
RPN7YPR108W LAA1P39526 2014 aa5.81□□□□□ -1.48
RPN7YPR108W THP2O13539 261 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W FBA1P14540 359 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W TEC1P18412 486 aa5.8□□□□□ -1.48
RPN7YPR108W RVS161P25343 265 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W MCM5P29496 775 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W CRM1P30822 1084 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W KAR9P32526 644 aa5.8□□□□□ -1.48
RPN7YPR108W RPS1AP33442 255 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W APM3P38153 483 aa5.8□□□□□ -1.48
RPN7YPR108W SSZ1P38788 538 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W CYC2P38909 366 aa5.8□□□□□ -1.48
RPN7YPR108W RIC1P40395 1056 aa5.8□□□□□ -1.48
RPN7YPR108W IRR1P40541 1150 aa5.8□□□□□ -1.48
RPN7YPR108W OPT1P40897 799 aa5.8□□□□□ -1.48
RPN7YPR108W ASG7P46993 209 aa5.8□□□□□ -1.48
RPN7YPR108W YJR142WP47173 342 aa5.8□□□□□ -1.48
RPN7YPR108W GTO1P48239 356 aa5.8□□□□□ -1.48
RPN7YPR108W UPF3P48412 387 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W STR3P53101 465 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W BUD32P53323 261 aa5.8□□□□□ -1.48
RPN7YPR108W NRD1P53617 575 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
RPN7YPR108W IMP4P53941 290 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W SLG1P54867 378 aa5.8□□□□□ -1.48
RPN7YPR108W RMI1Q02685 241 aa5.8□□□□□ -1.48
RPN7YPR108W YML131WQ03102 365 aa5.8□□□□□ -1.48
RPN7YPR108W EAR1Q03212 550 aa5.8□□□□□ -1.48
RPN7YPR108W CSN9Q03981 162 aa5.8□□□□□ -1.48
RPN7YPR108W BCH1Q05029 724 aa5.8□□□□□ -1.48
RPN7YPR108W YPR114WQ06107 315 aa5.8□□□□□ -1.48
RPN7YPR108W YLR257WQ06146 321 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W MCP2Q06567 569 aa5.8□□□□□ -1.48
RPN7YPR108W HDA3Q06623 655 aa5.8□□□□□ -1.48
RPN7YPR108W GRS2Q06817 618 aa5.8□□□□□ -1.48
RPN7YPR108W YPR084WQ06821 456 aa5.8□□□□□ -1.48
RPN7YPR108W DIA2Q08496 732 aaPredicted RBP5.8□□□□□ -1.48
RPN7YPR108W TMA46Q12000 345 aaKnown RBP5.8□□□□□ -1.48
RPN7YPR108W ULA1Q12059 462 aa5.8□□□□□ -1.48
RPN7YPR108W AI3P03877 415 aa5.79□□□□□ -1.48
RPN7YPR108W BCY1P07278 416 aaKnown RBP5.79□□□□□ -1.48
RPN7YPR108W SPS1P08458 490 aa5.79□□□□□ -1.48
RPN7YPR108W DBR1P24309 405 aaKnown RBP5.79□□□□□ -1.48
RPN7YPR108W RAD16P31244 790 aa5.79□□□□□ -1.48
RPN7YPR108W EFM1P38732 585 aa5.79□□□□□ -1.48
RPN7YPR108W LRP1P38801 184 aaKnown RBP5.79□□□□□ -1.48
RPN7YPR108W TDA11P38854 504 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 97.4 ms