RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	PRP2	P20095	876 aa	Predicted RBP	6.1	□□□□□ -1.43
TFB4	YPR056W	CRM1	P30822	1084 aa	Known RBP	6.1	□□□□□ -1.43
TFB4	YPR056W	RPT5	P33297	434 aa	Known RBP	6.1	□□□□□ -1.43
TFB4	YPR056W	KDX1	P36005	433 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	ALY1	P36117	915 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	ECM4	P36156	370 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	AKL1	P38080	1108 aa	Known RBP	6.1	□□□□□ -1.43
TFB4	YPR056W	CST26	P38226	397 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	MSG5	P38590	489 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	RFC3	P38629	340 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	KEL1	P38853	1164 aa	Known RBP	6.1	□□□□□ -1.43
TFB4	YPR056W	YIL077C	P40508	320 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	YIR014W	P40570	242 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	ASE1	P50275	885 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	VPS4	P52917	437 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	PUS2	P53167	370 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	CSL4	P53859	292 aa	Predicted RBP	6.1	□□□□□ -1.43
TFB4	YPR056W	SQS1	P53866	767 aa	Known RBP	6.1	□□□□□ -1.43
TFB4	YPR056W	RHO5	P53879	331 aa	Known RBP	6.1	□□□□□ -1.43
TFB4	YPR056W	LEE1	Q02799	301 aa	Known RBP	6.1	□□□□□ -1.43
TFB4	YPR056W	ECM7	Q06200	448 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	YOR022C	Q12204	715 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	LDB17	Q12342	491 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	AHC1	Q12433	566 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	APC2	Q12440	853 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	TFB5	Q3E7C1	72 aa	Predicted RBP	6.1	□□□□□ -1.43
TFB4	YPR056W	RAD61	Q99359	647 aa		6.1	□□□□□ -1.43
TFB4	YPR056W	SUP35	P05453	685 aa	Known RBP	6.09	□□□□□ -1.43
TFB4	YPR056W	ALG7	P07286	448 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	MET3	P08536	511 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	PRB1	P09232	635 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	GCD2	P12754	651 aa	Predicted RBP	6.09	□□□□□ -1.43
TFB4	YPR056W	MGM101	P32787	269 aa	Known RBP	6.09	□□□□□ -1.43
TFB4	YPR056W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	6.09	□□□□□ -1.43	not detected
TFB4	YPR056W	YHR033W	P38690	423 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	KSP1	P38691	1029 aa	Known RBP	6.09	□□□□□ -1.43
TFB4	YPR056W	TCD1	P38756	429 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	FUN12	P39730	1002 aa	Known RBP	6.09	□□□□□ -1.43
TFB4	YPR056W	JHD1	P40034	492 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	ULP2	P40537	1034 aa	Predicted RBP	6.09	□□□□□ -1.43
TFB4	YPR056W	PEF1	P53238	335 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	YGR066C	P53242	292 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	MPP6	P53725	186 aa	Predicted RBP	6.09	□□□□□ -1.43
TFB4	YPR056W	ASI2	P53895	289 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	RPA49	Q01080	415 aa	Predicted RBP	6.09	□□□□□ -1.43
TFB4	YPR056W	KAP120	Q02932	1032 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	PPM1	Q04081	328 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	SEG1	Q04279	960 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	SOV1	Q04748	898 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	STP4	Q07351	490 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	THI21	Q08975	551 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	ACF2	Q12168	779 aa		6.09	□□□□□ -1.43
TFB4	YPR056W	CBP2	P03874	630 aa	Predicted RBP	6.08	□□□□□ -1.44
TFB4	YPR056W	RPS9B	P05755	195 aa	Known RBP	6.08	□□□□□ -1.44
TFB4	YPR056W	TPK2	P06245	380 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	ARG1	P22768	420 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	ERG8	P24521	451 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	BOS1	P25385	244 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	TPO5	P36029	618 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	CUE2	P36075	443 aa	Known RBP	6.08	□□□□□ -1.44
TFB4	YPR056W	YFR018C	P43599	363 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	DUS1	P53759	423 aa	Known RBP	6.08	□□□□□ -1.44
TFB4	YPR056W	TIM44	Q01852	431 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	NGL2	Q03264	515 aa	Known RBP	6.08	□□□□□ -1.44
TFB4	YPR056W	DLT1	Q04216	342 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	RTN1	Q04947	295 aa	Known RBP	6.08	□□□□□ -1.44
TFB4	YPR056W	SSQ1	Q05931	657 aa	Predicted RBP	6.08	□□□□□ -1.44
TFB4	YPR056W	BOP2	Q06150	570 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	ICL2	Q12031	575 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	NUS1	Q12063	375 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	ATG29	Q12092	213 aa		6.08	□□□□□ -1.44
TFB4	YPR056W	ATP2	P00830	511 aa	Known RBP	6.07	□□□□□ -1.44
TFB4	YPR056W	SYN8	P31377	255 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	AFG1	P32317	509 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	SRB4	P32569	687 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	BUD2	P33314	1104 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	MRPL37	P36532	105 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	CDS1	P38221	457 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	ERC1	P38767	581 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	YHB1	P39676	399 aa	Known RBP	6.07	□□□□□ -1.44
TFB4	YPR056W	IAH1	P41734	238 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	LOC1	P43586	204 aa	Predicted RBP	6.07	□□□□□ -1.44
TFB4	YPR056W	ZAP1	P47043	880 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	RRP46	P53256	223 aa	Predicted RBP	6.07	□□□□□ -1.44
TFB4	YPR056W	YNL143C	P53908	130 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	VPS20	Q04272	221 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	RQC1	Q05468	723 aa	Known RBP	6.07	□□□□□ -1.44
TFB4	YPR056W	BCP1	Q06338	283 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	VAM6	Q07468	1049 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	YEH1	Q07804	573 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	ULA1	Q12059	462 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	YDR061W	Q12298	539 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	TRM13	Q12383	476 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	NBL1	Q3E7Y6	73 aa		6.07	□□□□□ -1.44
TFB4	YPR056W	STE2	D6VTK4	431 aa		6.06	□□□□□ -1.44
TFB4	YPR056W	ARG80	P07249	177 aa		6.06	□□□□□ -1.44
TFB4	YPR056W	LPD1	P09624	499 aa	Known RBP	6.06	□□□□□ -1.44
TFB4	YPR056W	YBL055C	P34220	418 aa	Predicted RBP	6.06	□□□□□ -1.44
TFB4	YPR056W	KES1	P35844	434 aa	Known RBP	6.06	□□□□□ -1.44
TFB4	YPR056W	THI2	P38141	450 aa		6.06	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 51.3 ms