RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C RIO2P40160 425 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C PIG2P40187 538 aa2.66□□□□□ -1.98
DNL4YOR005C MLC1P53141 149 aa2.66□□□□□ -1.98
DNL4YOR005C LCL3P53153 274 aa2.66□□□□□ -1.98
DNL4YOR005C YPL107WQ02873 248 aa2.66□□□□□ -1.98
DNL4YOR005C ARX1Q03862 593 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C RSF1Q05043 376 aa2.66□□□□□ -1.98
DNL4YOR005C RQC1Q05468 723 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C TLG2Q08144 397 aa2.66□□□□□ -1.98
DNL4YOR005C NOP12Q08208 459 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C BUD7Q08754 746 aa2.66□□□□□ -1.98
DNL4YOR005C FRE5Q08908 694 aa2.66□□□□□ -1.98
DNL4YOR005C CHS5Q12114 671 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C YKL068W-AQ3E826 78 aa2.66□□□□□ -1.98
DNL4YOR005C PDR18P53756 1333 aa2.66□□□□□ -1.98
DNL4YOR005C STF1P01098 86 aa2.65□□□□□ -1.98
DNL4YOR005C ARD1P07347 238 aaPredicted RBP2.65□□□□□ -1.98
DNL4YOR005C MBR1P23493 339 aa2.65□□□□□ -1.98
DNL4YOR005C SNT1P25357 1226 aa2.65□□□□□ -1.98
DNL4YOR005C LAS1P36146 502 aaPredicted RBP2.65□□□□□ -1.98
DNL4YOR005C POL12P38121 705 aaPredicted RBP2.65□□□□□ -1.98
DNL4YOR005C MDE1P47095 244 aa2.65□□□□□ -1.98
DNL4YOR005C IMO32P53219 342 aa2.65□□□□□ -1.98
DNL4YOR005C SEC5P89102 971 aa2.65□□□□□ -1.98
DNL4YOR005C RPA49Q01080 415 aaPredicted RBP2.65□□□□□ -1.98
DNL4YOR005C YMR102CQ03177 834 aa2.65□□□□□ -1.98
DNL4YOR005C YML037CQ03703 340 aa2.65□□□□□ -1.98
DNL4YOR005C ROY1Q04847 553 aa2.65□□□□□ -1.98
DNL4YOR005C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.65□□□□□ -1.98not detected
DNL4YOR005C IZH3Q07959 543 aa2.65□□□□□ -1.98
DNL4YOR005C SPE3Q12074 293 aaKnown RBP2.65□□□□□ -1.98
DNL4YOR005C GPM3Q12326 303 aa2.65□□□□□ -1.98
DNL4YOR005C GPA1P08539 472 aa2.65□□□□□ -1.99
DNL4YOR005C REC107P21651 314 aa2.65□□□□□ -1.99
DNL4YOR005C KAR4P25583 335 aa2.65□□□□□ -1.99
DNL4YOR005C RDS1P25611 832 aa2.65□□□□□ -1.99
DNL4YOR005C ERV1P27882 189 aa2.65□□□□□ -1.99
DNL4YOR005C COQ2P32378 372 aa2.65□□□□□ -1.99
DNL4YOR005C PDB1P32473 366 aaKnown RBP2.65□□□□□ -1.99
DNL4YOR005C DEF1P35732 738 aaKnown RBP2.65□□□□□ -1.99
DNL4YOR005C HEL1P36113 551 aa2.65□□□□□ -1.99
DNL4YOR005C MRPL7P36519 292 aa2.65□□□□□ -1.99
DNL4YOR005C SEC24P40482 926 aaKnown RBP2.65□□□□□ -1.99
DNL4YOR005C YIR042CP40586 236 aa2.65□□□□□ -1.99
DNL4YOR005C FKH2P41813 862 aa2.65□□□□□ -1.99
DNL4YOR005C ALF1P53904 254 aa2.65□□□□□ -1.99
DNL4YOR005C NCS2P53923 493 aaPredicted RBP2.65□□□□□ -1.99
DNL4YOR005C EOS1P53938 366 aa2.65□□□□□ -1.99
DNL4YOR005C ARP5P53946 755 aa2.65□□□□□ -1.99
DNL4YOR005C ATG29Q12092 213 aa2.65□□□□□ -1.99
DNL4YOR005C YDL177CQ12257 170 aa2.65□□□□□ -1.99
DNL4YOR005C YBR085C-AO43137 85 aa2.64□□□□□ -1.99
DNL4YOR005C GSY2P27472 705 aa2.64□□□□□ -1.99
DNL4YOR005C PAP1P29468 568 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C SWH1P35845 1188 aa2.64□□□□□ -1.99
DNL4YOR005C TAT1P38085 619 aa2.64□□□□□ -1.99
DNL4YOR005C FTH1P38310 465 aa2.64□□□□□ -1.99
DNL4YOR005C SDH8P38345 138 aa2.64□□□□□ -1.99
DNL4YOR005C ETP1P38748 585 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C CCT4P39078 528 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C MEF2P39677 819 aa2.64□□□□□ -1.99
DNL4YOR005C ICP55P40051 511 aa2.64□□□□□ -1.99
DNL4YOR005C EFM4P40516 257 aa2.64□□□□□ -1.99
DNL4YOR005C DOT5P40553 215 aa2.64□□□□□ -1.99
DNL4YOR005C CTK2P46962 323 aa2.64□□□□□ -1.99
DNL4YOR005C YGL082WP53155 381 aa2.64□□□□□ -1.99
DNL4YOR005C SPC98P53540 846 aa2.64□□□□□ -1.99
DNL4YOR005C USA1Q03714 838 aa2.64□□□□□ -1.99
DNL4YOR005C SOV1Q04748 898 aa2.64□□□□□ -1.99
DNL4YOR005C VPS38Q05919 439 aa2.64□□□□□ -1.99
DNL4YOR005C MMR1Q06324 491 aa2.64□□□□□ -1.99
DNL4YOR005C GPN2Q08726 347 aaPredicted RBP2.64□□□□□ -1.99
DNL4YOR005C ATG9Q12142 997 aa2.64□□□□□ -1.99
DNL4YOR005C SEC39Q12745 709 aa2.64□□□□□ -1.99
DNL4YOR005C AFI1Q99222 893 aa2.64□□□□□ -1.99
DNL4YOR005C RRP5Q05022 1729 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C RPO26P20435 155 aa2.64□□□□□ -1.99
DNL4YOR005C YIH1P25637 258 aa2.64□□□□□ -1.99
DNL4YOR005C SEC66P33754 206 aa2.64□□□□□ -1.99
DNL4YOR005C OSH3P38713 996 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C OTU2P38747 307 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C ERC1P38767 581 aa2.64□□□□□ -1.99
DNL4YOR005C YER130CP39959 443 aa2.64□□□□□ -1.99
DNL4YOR005C NAS2P40555 220 aa2.64□□□□□ -1.99
DNL4YOR005C MPS3P47069 682 aa2.64□□□□□ -1.99
DNL4YOR005C APT1P49435 187 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C AMA1P50082 593 aa2.64□□□□□ -1.99
DNL4YOR005C STR3P53101 465 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C FHN1P53279 174 aa2.64□□□□□ -1.99
DNL4YOR005C TOF1P53840 1238 aa2.64□□□□□ -1.99
DNL4YOR005C YNL058CP53947 316 aa2.64□□□□□ -1.99
DNL4YOR005C EFR3Q03653 782 aaKnown RBP2.64□□□□□ -1.99
DNL4YOR005C YAP6Q03935 383 aa2.64□□□□□ -1.99
DNL4YOR005C RBA50Q04418 439 aa2.64□□□□□ -1.99
DNL4YOR005C THI72Q08579 599 aa2.64□□□□□ -1.99
DNL4YOR005C AVL9Q12500 764 aa2.64□□□□□ -1.99
DNL4YOR005C GSC2P40989 1895 aa2.64□□□□□ -1.99
DNL4YOR005C MATALPHA2P0CY08 210 aa2.64□□□□□ -1.99
DNL4YOR005C HMLALPHA2P0CY09 210 aa2.64□□□□□ -1.99
DNL4YOR005C PDE1P22434 369 aa2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms