RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	EPT1	P22140	391 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	YSP3	P25036	478 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	MRPL9	P31334	269 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	SPS19	P32573	292 aa	Known RBP	4.68	□□□□□ -1.66
ATM1	YMR301C	CYC2	P38909	366 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	CKB2	P38930	258 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	END3	P39013	349 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	ALR2	P43553	858 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	HXT16	P47185	567 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	GNP1	P48813	663 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	YGL108C	P53139	140 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	HXT15	P54854	567 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	MCP2	Q06567	569 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	LDB17	Q12342	491 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	TMA17	Q12513	150 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	STT4	P37297	1900 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	ABF1	P14164	731 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	APA1	P16550	321 aa	Known RBP	4.68	□□□□□ -1.66
ATM1	YMR301C	DAL82	P21705	255 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	SEA4	P38164	1038 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	GND1	P38720	489 aa	Known RBP	4.68	□□□□□ -1.66
ATM1	YMR301C	PCL5	P38794	229 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	RGI2	P40188	164 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	NUP85	P46673	744 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	ALF1	P53904	254 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	MET14	Q02196	202 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	MEH1	Q02205	184 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	SLU7	Q02775	382 aa	Known RBP	4.68	□□□□□ -1.66
ATM1	YMR301C	RLI1	Q03195	608 aa	Known RBP	4.68	□□□□□ -1.66
ATM1	YMR301C	YMR114C	Q04471	368 aa	Known RBP	4.68	□□□□□ -1.66
ATM1	YMR301C	CIA1	Q05583	330 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	HDA2	Q06629	674 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	GIC2	Q06648	383 aa		4.68	□□□□□ -1.66
ATM1	YMR301C	HBT1	Q07653	1046 aa	Known RBP	4.68	□□□□□ -1.66
ATM1	YMR301C	PLC1	P32383	869 aa		4.67	□□□□□ -1.66
ATM1	YMR301C	IMP3	P32899	183 aa	Predicted RBP	4.67	□□□□□ -1.66
ATM1	YMR301C	STO1	P34160	861 aa	Known RBP	4.67	□□□□□ -1.66
ATM1	YMR301C	GMH1	P36125	273 aa		4.67	□□□□□ -1.66
ATM1	YMR301C	CCT6	P39079	546 aa		4.67	□□□□□ -1.66
ATM1	YMR301C	CEM1	P39525	442 aa		4.67	□□□□□ -1.66
ATM1	YMR301C	ZIM17	P42844	174 aa		4.67	□□□□□ -1.66
ATM1	YMR301C	BIR1	P47134	954 aa		4.67	□□□□□ -1.66
ATM1	YMR301C	ESF2	P53743	316 aa	Known RBP	4.67	□□□□□ -1.66
ATM1	YMR301C	ARX1	Q03862	593 aa	Known RBP	4.67	□□□□□ -1.66
ATM1	YMR301C	PLB3	Q08108	686 aa		4.67	□□□□□ -1.66
ATM1	YMR301C	TGL5	Q12043	749 aa		4.67	□□□□□ -1.66
ATM1	YMR301C	YDR061W	Q12298	539 aa		4.67	□□□□□ -1.66
ATM1	YMR301C	NKP1	Q12493	238 aa		4.67	□□□□□ -1.66
ATM1	YMR301C	ATP4	P05626	244 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	CDC24	P11433	854 aa	Predicted RBP	4.66	□□□□□ -1.66
ATM1	YMR301C	SCL1	P21243	252 aa	Known RBP	4.66	□□□□□ -1.66
ATM1	YMR301C	TRX2	P22803	104 aa	Known RBP	4.66	□□□□□ -1.66
ATM1	YMR301C	RNQ1	P25367	405 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	not detected
ATM1	YMR301C	CTF13	P35203	478 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	MCX1	P38323	520 aa	Predicted RBP	4.66	□□□□□ -1.66
ATM1	YMR301C	DBP8	P38719	431 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	STN1	P38960	494 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	YMR134W	P40207	237 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	YIL165C	P40446	119 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	CFD1	P40558	293 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	RTA1	P53047	317 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	YPR003C	P53394	754 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	TGL2	P54857	326 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	NOG1	Q02892	647 aa	Known RBP	4.66	□□□□□ -1.66
ATM1	YMR301C	PFA4	Q12006	378 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	SUL2	Q12325	893 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	SKM1	Q12469	655 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	GID7	P25569	745 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	NDI1	P32340	513 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	PIM1	P36775	1133 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	PRE3	P38624	215 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	DED81	P38707	554 aa	Known RBP	4.66	□□□□□ -1.66
ATM1	YMR301C	SSN3	P39073	555 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	YAL037W	P39728	267 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	YFR018C	P43599	363 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	HST3	P53687	447 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	EFM6	P53970	246 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	TRS31	Q03337	283 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	RCO1	Q04779	684 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	YOL073C	Q08232	322 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	BUD7	Q08754	746 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	AVL9	Q12500	764 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	IRA1	P18963	3092 aa		4.66	□□□□□ -1.66
ATM1	YMR301C	CPA1	P07258	411 aa	Known RBP	4.65	□□□□□ -1.66
ATM1	YMR301C	SPS1	P08458	490 aa		4.65	□□□□□ -1.66
ATM1	YMR301C	CKI1	P20485	582 aa		4.65	□□□□□ -1.66
ATM1	YMR301C	HEM12	P32347	362 aa	Predicted RBP	4.65	□□□□□ -1.66
ATM1	YMR301C	SRP101	P32916	621 aa		4.65	□□□□□ -1.66
ATM1	YMR301C	KES1	P35844	434 aa	Known RBP	4.65	□□□□□ -1.66
ATM1	YMR301C	MSG5	P38590	489 aa		4.65	□□□□□ -1.66
ATM1	YMR301C	SMF2	P38778	549 aa		4.65	□□□□□ -1.66
ATM1	YMR301C	LSM5	P40089	93 aa	Known RBP	4.65	□□□□□ -1.66
ATM1	YMR301C	RIM8	P53179	542 aa		4.65	□□□□□ -1.66
ATM1	YMR301C	EGD1	Q02642	157 aa	Known RBP	4.65	□□□□□ -1.66
ATM1	YMR301C	TDA9	Q04545	1251 aa		4.65	□□□□□ -1.66
ATM1	YMR301C	STP3	Q05937	343 aa		4.65	□□□□□ -1.66
ATM1	YMR301C	SLD7	Q08457	257 aa		4.65	□□□□□ -1.66
ATM1	YMR301C	YOR378W	Q08902	515 aa		4.65	□□□□□ -1.66
ATM1	YMR301C	RPS31	P05759	152 aa	Known RBP	4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms