RNA–Protein interactions for RNA: YMR247C

RKR1, Transcript of RING domain E3 ubiquitin ligase, yeastyeast

Gene RKR1, Length 4,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RKR1YMR247C YJR112W-AQ3E743 109 aa0.92□□□□□ -2.26
RKR1YMR247C BPT1P14772 1559 aa0.92□□□□□ -2.26
RKR1YMR247C SGS1P35187 1447 aa0.92□□□□□ -2.26
RKR1YMR247C TRM3Q07527 1436 aa0.92□□□□□ -2.26
RKR1YMR247C HSL1P34244 1518 aa0.91□□□□□ -2.26
RKR1YMR247C CAR1P00812 333 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C CBP1P07252 654 aa0.91□□□□□ -2.26
RKR1YMR247C RPB2P08518 1224 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C PEP5P12868 1029 aa0.91□□□□□ -2.26
RKR1YMR247C CBS2P14905 389 aa0.91□□□□□ -2.26
RKR1YMR247C RPB5P20434 215 aa0.91□□□□□ -2.26
RKR1YMR247C RGT1P32862 1170 aa0.91□□□□□ -2.26
RKR1YMR247C UBS1P38290 277 aa0.91□□□□□ -2.26
RKR1YMR247C DBP8P38719 431 aa0.91□□□□□ -2.26
RKR1YMR247C AIM14P53109 570 aa0.91□□□□□ -2.26
RKR1YMR247C YNL034WP53963 612 aa0.91□□□□□ -2.26
RKR1YMR247C PRM6Q04705 352 aa0.91□□□□□ -2.26
RKR1YMR247C MUM3Q08750 479 aa0.91□□□□□ -2.26
RKR1YMR247C INP53Q12271 1107 aa0.91□□□□□ -2.26
RKR1YMR247C AVL9Q12500 764 aa0.91□□□□□ -2.26
RKR1YMR247C VCX1Q99385 411 aa0.91□□□□□ -2.26
RKR1YMR247C APC1P53886 1748 aa0.91□□□□□ -2.26
RKR1YMR247C GCN4P03069 281 aa0.91□□□□□ -2.26
RKR1YMR247C SES1P07284 462 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C AAD3P25612 363 aa0.91□□□□□ -2.26
RKR1YMR247C URK1P27515 501 aa0.91□□□□□ -2.26
RKR1YMR247C NFU1P32860 256 aa0.91□□□□□ -2.26
RKR1YMR247C RRP1P35178 278 aaPredicted RBP0.91□□□□□ -2.26
RKR1YMR247C RMA1P36001 430 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C SET3P36124 751 aa0.91□□□□□ -2.26
RKR1YMR247C OLA1P38219 394 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C YHR210CP38893 341 aa0.91□□□□□ -2.26
RKR1YMR247C ERP2P39704 215 aa0.91□□□□□ -2.26
RKR1YMR247C PSF2P40359 213 aa0.91□□□□□ -2.26
RKR1YMR247C TMA108P40462 946 aa0.91□□□□□ -2.26
RKR1YMR247C IDP2P41939 412 aa0.91□□□□□ -2.26
RKR1YMR247C SAD1P43589 448 aa0.91□□□□□ -2.26
RKR1YMR247C APT1P49435 187 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C DIA3P52290 468 aa0.91□□□□□ -2.26
RKR1YMR247C YML122CQ03207 126 aa0.91□□□□□ -2.26
RKR1YMR247C RSN1Q03516 953 aa0.91□□□□□ -2.26
RKR1YMR247C SSK1Q07084 712 aa0.91□□□□□ -2.26
RKR1YMR247C RIX7Q07844 837 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C TY1B-JR2P47100 1755 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C TY1B-ER2Q03619 1755 aa0.91□□□□□ -2.26
RKR1YMR247C TY1B-MR1Q04214 1755 aa0.91□□□□□ -2.26
RKR1YMR247C TY1B-MR2Q04670 1755 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C TY1B-LR1Q12088 1755 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C TY1B-NL1Q12112 1755 aa0.91□□□□□ -2.26
RKR1YMR247C TY1B-GR1Q12141 1755 aa0.91□□□□□ -2.26
RKR1YMR247C TY1B-BLQ12490 1755 aa0.91□□□□□ -2.26
RKR1YMR247C PUT2P07275 575 aa0.91□□□□□ -2.26
RKR1YMR247C SEC53P07283 254 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C NUC1P08466 329 aa0.91□□□□□ -2.26
RKR1YMR247C MSS18P08593 268 aa0.91□□□□□ -2.26
RKR1YMR247C BRF1P29056 596 aa0.91□□□□□ -2.26
RKR1YMR247C SCO2P38072 301 aa0.91□□□□□ -2.26
RKR1YMR247C YHR131CP38835 850 aa0.91□□□□□ -2.26
RKR1YMR247C CIN1P40987 1014 aa0.91□□□□□ -2.26
RKR1YMR247C CAF40P53829 373 aa0.91□□□□□ -2.26
RKR1YMR247C MRP51Q02950 344 aa0.91□□□□□ -2.26
RKR1YMR247C TAF12Q03761 539 aa0.91□□□□□ -2.26
RKR1YMR247C YDR109CQ04585 715 aa0.91□□□□□ -2.26
RKR1YMR247C ARP9Q05123 467 aa0.91□□□□□ -2.26
RKR1YMR247C YDL009CQ12210 107 aa0.91□□□□□ -2.26
RKR1YMR247C YOL114CQ12322 202 aa0.91□□□□□ -2.26
RKR1YMR247C LDB17Q12342 491 aa0.91□□□□□ -2.26
RKR1YMR247C RRI1Q12468 440 aa0.91□□□□□ -2.26
RKR1YMR247C YLR111WQ12528 110 aa0.91□□□□□ -2.26
RKR1YMR247C SPO14P36126 1683 aa0.91□□□□□ -2.26
RKR1YMR247C ATP2P00830 511 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C CDC23P16522 626 aa0.91□□□□□ -2.26
RKR1YMR247C RAD14P28519 371 aa0.91□□□□□ -2.26
RKR1YMR247C SSE2P32590 693 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C PRS1P32895 427 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C YKL100CP34248 587 aa0.91□□□□□ -2.26
RKR1YMR247C ELF1P36053 145 aa0.91□□□□□ -2.26
RKR1YMR247C YBL028CP38202 106 aa0.91□□□□□ -2.26
RKR1YMR247C YHL041WP38730 149 aa0.91□□□□□ -2.26
RKR1YMR247C UBA4P38820 440 aa0.91□□□□□ -2.26
RKR1YMR247C QRI7P43122 407 aa0.91□□□□□ -2.26
RKR1YMR247C SIP4P46954 829 aa0.91□□□□□ -2.26
RKR1YMR247C LYS20P48570 428 aaKnown RBP0.91□□□□□ -2.26
RKR1YMR247C RHO4Q00246 291 aa0.91□□□□□ -2.26
RKR1YMR247C CIK1Q01649 594 aa0.91□□□□□ -2.26
RKR1YMR247C VTI1Q04338 217 aa0.91□□□□□ -2.26
RKR1YMR247C RAD34Q06665 692 aa0.91□□□□□ -2.26
RKR1YMR247C LOT6Q07923 191 aa0.91□□□□□ -2.26
RKR1YMR247C YAP7Q08182 245 aa0.91□□□□□ -2.26
RKR1YMR247C HUA2Q12134 243 aa0.91□□□□□ -2.26
RKR1YMR247C DOP1Q03921 1698 aa0.91□□□□□ -2.26
RKR1YMR247C YIL177CP40434 1758 aa0.9□□□□□ -2.26
RKR1YMR247C YJL225CP40889 1758 aa0.9□□□□□ -2.26
RKR1YMR247C YLR302CO13544 120 aa0.9□□□□□ -2.26
RKR1YMR247C ERG11P10614 530 aa0.9□□□□□ -2.26
RKR1YMR247C SPT15P13393 240 aaKnown RBP0.9□□□□□ -2.26
RKR1YMR247C SRP54P20424 541 aaKnown RBP0.9□□□□□ -2.26
RKR1YMR247C ARG1P22768 420 aa0.9□□□□□ -2.26
RKR1YMR247C RIT1P23796 513 aa0.9□□□□□ -2.26
RKR1YMR247C CLB4P24871 460 aa0.9□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms