RNA–Protein interactions for RNA: YMR094W

CTF13, Transcript of Subunit of the CBF3 complex, yeastyeast

Gene CTF13, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF13YMR094W LCB1P25045 558 aaKnown RBP3.34□□□□□ -1.88
CTF13YMR094W AXL1P40851 1208 aa3.34□□□□□ -1.88
CTF13YMR094W YJR008WP47085 338 aa3.34□□□□□ -1.88
CTF13YMR094W YDL186WP48568 277 aa3.34□□□□□ -1.88
CTF13YMR094W MSS11Q03825 758 aa3.34□□□□□ -1.88
CTF13YMR094W APL4Q12028 832 aa3.34□□□□□ -1.88
CTF13YMR094W RPL15AP05748 204 aaKnown RBP3.33□□□□□ -1.88
CTF13YMR094W TPM2P40414 161 aa3.33□□□□□ -1.88
CTF13YMR094W DPB11P47027 764 aaPredicted RBP3.33□□□□□ -1.88
CTF13YMR094W RTS3P53289 263 aa3.33□□□□□ -1.88
CTF13YMR094W PAP2P53632 584 aaKnown RBP3.33□□□□□ -1.88
CTF13YMR094W ARC35P53731 342 aaKnown RBP3.33□□□□□ -1.88
CTF13YMR094W MRPL13Q02204 264 aa3.33□□□□□ -1.88
CTF13YMR094W RBA50Q04418 439 aa3.33□□□□□ -1.88
CTF13YMR094W HCR1Q05775 265 aaKnown RBP3.33□□□□□ -1.88
CTF13YMR094W ATG9Q12142 997 aa3.33□□□□□ -1.88
CTF13YMR094W YLL056CQ12177 298 aa3.33□□□□□ -1.88
CTF13YMR094W NYV1Q12255 253 aa3.33□□□□□ -1.88
CTF13YMR094W ARP6Q12509 438 aa3.33□□□□□ -1.88
CTF13YMR094W YOR019WQ99248 730 aa3.33□□□□□ -1.88
CTF13YMR094W SNF3P10870 884 aa3.32□□□□□ -1.88
CTF13YMR094W PGS1P25578 521 aa3.32□□□□□ -1.88
CTF13YMR094W ATS1P31386 333 aa3.32□□□□□ -1.88
CTF13YMR094W ACA1P39970 489 aa3.32□□□□□ -1.88
CTF13YMR094W YNR061CP53747 219 aa3.32□□□□□ -1.88
CTF13YMR094W RPM2Q02773 1202 aa3.32□□□□□ -1.88
CTF13YMR094W VCX1Q99385 411 aa3.32□□□□□ -1.88
CTF13YMR094W MON2P48563 1636 aaPredicted RBP3.31□□□□□ -1.88
CTF13YMR094W YEF3P16521 1044 aaKnown RBP3.31□□□□□ -1.88
CTF13YMR094W MSM1P22438 575 aa3.31□□□□□ -1.88
CTF13YMR094W ERG8P24521 451 aa3.31□□□□□ -1.88
CTF13YMR094W YKL050CP35736 922 aa3.31□□□□□ -1.88
CTF13YMR094W IFA38P38286 347 aa3.31□□□□□ -1.88
CTF13YMR094W UBA4P38820 440 aa3.31□□□□□ -1.88
CTF13YMR094W ANS1P38832 159 aa3.31□□□□□ -1.88
CTF13YMR094W YJL213WP40896 331 aa3.31□□□□□ -1.88
CTF13YMR094W STR3P53101 465 aaKnown RBP3.31□□□□□ -1.88
CTF13YMR094W REG1Q00816 1014 aa3.31□□□□□ -1.88
CTF13YMR094W CIA1Q05583 330 aa3.31□□□□□ -1.88
CTF13YMR094W PDH1Q12428 516 aaKnown RBP3.31□□□□□ -1.88
CTF13YMR094W TYR1P20049 452 aa3.3□□□□□ -1.88
CTF13YMR094W UBC1P21734 215 aaKnown RBP3.3□□□□□ -1.88
CTF13YMR094W RAD16P31244 790 aa3.3□□□□□ -1.88
CTF13YMR094W AGA1P32323 725 aa3.3□□□□□ -1.88
CTF13YMR094W RPH1P39956 796 aa3.3□□□□□ -1.88
CTF13YMR094W SPG5P42933 373 aa3.3□□□□□ -1.88
CTF13YMR094W YFR016CP43597 1233 aaKnown RBP3.3□□□□□ -1.88
CTF13YMR094W RTT101P47050 842 aa3.3□□□□□ -1.88
CTF13YMR094W SHE10P53075 577 aa3.3□□□□□ -1.88
CTF13YMR094W INP53Q12271 1107 aa3.3□□□□□ -1.88
CTF13YMR094W SET6Q12529 373 aa3.3□□□□□ -1.88
CTF13YMR094W MTF2P10849 440 aa3.29□□□□□ -1.88
CTF13YMR094W SPE2P21182 396 aa3.29□□□□□ -1.88
CTF13YMR094W MCK1P21965 375 aaKnown RBP3.29□□□□□ -1.88
CTF13YMR094W YTA12P40341 825 aa3.29□□□□□ -1.88
CTF13YMR094W MKT1P40850 830 aaKnown RBP3.29□□□□□ -1.88
CTF13YMR094W IME4P41833 600 aa3.29□□□□□ -1.88
CTF13YMR094W YPI1P43587 155 aa3.29□□□□□ -1.88
CTF13YMR094W YJL132WP47014 750 aa3.29□□□□□ -1.88
CTF13YMR094W COS10P52924 374 aa3.29□□□□□ -1.88
CTF13YMR094W YGL082WP53155 381 aa3.29□□□□□ -1.88
CTF13YMR094W ADD37Q03233 198 aa3.29□□□□□ -1.88
CTF13YMR094W SSK1Q07084 712 aa3.29□□□□□ -1.88
CTF13YMR094W SNC1P31109 117 aa3.28□□□□□ -1.88
CTF13YMR094W TIF3P34167 436 aaKnown RBP3.28□□□□□ -1.88
CTF13YMR094W SWH1P35845 1188 aa3.28□□□□□ -1.88
CTF13YMR094W YNK1P36010 153 aaKnown RBP3.28□□□□□ -1.88
CTF13YMR094W SNU114P36048 1008 aaKnown RBP3.28□□□□□ -1.88
CTF13YMR094W AGP2P38090 596 aa3.28□□□□□ -1.88
CTF13YMR094W PSD1P39006 500 aa3.28□□□□□ -1.88
CTF13YMR094W RPR2P40571 144 aa3.28□□□□□ -1.88
CTF13YMR094W VMS1Q04311 632 aaKnown RBP3.28□□□□□ -1.88
CTF13YMR094W ERP1Q05359 219 aaKnown RBP3.28□□□□□ -1.88
CTF13YMR094W NUS1Q12063 375 aa3.28□□□□□ -1.88
CTF13YMR094W CMK1P27466 446 aaKnown RBP3.27□□□□□ -1.89
CTF13YMR094W NDC1P32500 655 aa3.27□□□□□ -1.89
CTF13YMR094W VPS17P32913 551 aa3.27□□□□□ -1.89
CTF13YMR094W ROT2P38138 954 aa3.27□□□□□ -1.89
CTF13YMR094W UIP3P39547 235 aa3.27□□□□□ -1.89
CTF13YMR094W SEC24P40482 926 aaKnown RBP3.27□□□□□ -1.89
CTF13YMR094W SAM50P53969 484 aa3.27□□□□□ -1.89
CTF13YMR094W UBX4P54730 416 aa3.27□□□□□ -1.89
CTF13YMR094W BLS1Q06071 122 aa3.27□□□□□ -1.89
CTF13YMR094W CDC45Q08032 650 aa3.27□□□□□ -1.89
CTF13YMR094W PSK2Q08217 1101 aa3.27□□□□□ -1.89
CTF13YMR094W YBR085C-AO43137 85 aa3.27□□□□□ -1.89
CTF13YMR094W MTF1P14908 341 aaKnown RBP3.27□□□□□ -1.89
CTF13YMR094W APA1P16550 321 aaKnown RBP3.27□□□□□ -1.89
CTF13YMR094W PFK2P16862 959 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
CTF13YMR094W SEC62P21825 274 aa3.27□□□□□ -1.89
CTF13YMR094W PWP2P25635 923 aaKnown RBP3.27□□□□□ -1.89
CTF13YMR094W MRPL4P36517 319 aa3.27□□□□□ -1.89
CTF13YMR094W YBP1P38315 674 aa3.27□□□□□ -1.89
CTF13YMR094W PCA1P38360 1216 aa3.27□□□□□ -1.89
CTF13YMR094W YEL068CP39977 110 aa3.27□□□□□ -1.89
CTF13YMR094W VPS4P52917 437 aa3.27□□□□□ -1.89
CTF13YMR094W EMI2Q04409 500 aaKnown RBP3.27□□□□□ -1.89
CTF13YMR094W TFC6Q06339 672 aa3.27□□□□□ -1.89
CTF13YMR094W THI20Q08224 551 aa3.27□□□□□ -1.89
CTF13YMR094W RPS2P25443 254 aaKnown RBP3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms