RNA–Protein interactions for RNA: YLR424W

SPP382, Transcript of Essential protein that forms a dimer with Ntr2p, yeast

Gene SPP382, Length 2,127 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPP382	YLR424W	TWF1	P53250	332 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	MRPS35	P53292	345 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	REC102	Q02721	264 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	YMR206W	Q03695	313 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	HBT1	Q07653	1046 aa	Known RBP	3.11	□□□□□ -1.91
SPP382	YLR424W	CLP1	Q08685	445 aa	Predicted RBP	3.11	□□□□□ -1.91
SPP382	YLR424W	TMA16	Q08687	178 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	ICL2	Q12031	575 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	GPR1	Q12361	961 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	SPE4	Q12455	300 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	YLR415C	O13578	112 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	PYC1	P11154	1178 aa	Known RBP	3.11	□□□□□ -1.91
SPP382	YLR424W	AFG1	P32317	509 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	YKT6	P36015	200 aa	Known RBP	3.11	□□□□□ -1.91
SPP382	YLR424W	YHL017W	P38745	532 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	CCT6	P39079	546 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	MTR3	P48240	250 aa	Predicted RBP	3.11	□□□□□ -1.91
SPP382	YLR424W	MUP1	P50276	574 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	CUE3	P53137	624 aa	Known RBP	3.11	□□□□□ -1.91
SPP382	YLR424W	BOP3	P53958	396 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	TMN2	Q04562	672 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	ECM18	Q04623	453 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	VPS38	Q05919	439 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	UAF30	Q08747	228 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	YPL272C	Q08984	517 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	YRM1	Q12340	786 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	AVL9	Q12500	764 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	ADF1	Q2V2Q1	113 aa		3.11	□□□□□ -1.91
SPP382	YLR424W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.11	□□□□□ -1.91
SPP382	YLR424W	GCD2	P12754	651 aa	Predicted RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	VPS3	P23643	1011 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	HMX1	P32339	317 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	MRE11	P32829	692 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	RRT2	P38332	387 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	NUP60	P39705	539 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	PFA3	P42836	336 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	LOC1	P43586	204 aa	Predicted RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	BIT61	P47041	543 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	EFM3	P47163	339 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	YBP2	P53169	641 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	NRG1	Q03125	231 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	HMO1	Q03973	246 aa	Known RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	RPN9	Q04062	393 aa	Known RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	PPM1	Q04081	328 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	RRT8	Q08219	342 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	UBX3	Q12229	455 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	GAL7	P08431	366 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	ERG20	P08524	352 aa	Known RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	BUD14	P27637	709 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	DPH5	P32469	300 aa	Predicted RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	GEX2	P36173	615 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	PIM1	P36775	1133 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	KTR3	P38130	404 aa	Predicted RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	PPS1	P38148	807 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	MAL33	P38157	468 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	PEX32	P38292	413 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	RFC3	P38629	340 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	YNG2	P38806	282 aa	Known RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	TOM71	P38825	639 aa	Known RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	ECM1	P39715	212 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	YER034W	P40022	185 aa	Known RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	JHD1	P40034	492 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	PAN2	P53010	1115 aa	Predicted RBP	3.1	□□□□□ -1.91
SPP382	YLR424W	VID30	P53076	958 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	GIM3	P53900	129 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	YNL144C	P53907	740 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	ARG5,6	Q01217	863 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	MUK1	Q02866	612 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	INA17	Q02888	182 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	VPS20	Q04272	221 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	SEG1	Q04279	960 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	ATG23	Q06671	453 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	MCM21	Q06675	368 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	BUD7	Q08754	746 aa		3.1	□□□□□ -1.91
SPP382	YLR424W	CBP2	P03874	630 aa	Predicted RBP	3.09	□□□□□ -1.91
SPP382	YLR424W	SEC12	P11655	471 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	ERG6	P25087	383 aa	Known RBP	3.09	□□□□□ -1.91
SPP382	YLR424W	HCS1	P34243	683 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	ATP3	P38077	311 aa	Known RBP	3.09	□□□□□ -1.91
SPP382	YLR424W	AGP2	P38090	596 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	YBR053C	P38235	358 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	ULP2	P40537	1034 aa	Predicted RBP	3.09	□□□□□ -1.91
SPP382	YLR424W	DOT5	P40553	215 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	YIR042C	P40586	236 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	HXT14	P42833	540 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	YDL183C	P48569	320 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	STR3	P53101	465 aa	Known RBP	3.09	□□□□□ -1.91
SPP382	YLR424W	HOP2	P53187	214 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	AQR1	P53943	586 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	MTG1	Q03151	367 aa	Predicted RBP	3.09	□□□□□ -1.91
SPP382	YLR424W	YML037C	Q03703	340 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	FIN1	Q03898	291 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	RRB1	Q04225	511 aa	Known RBP	3.09	□□□□□ -1.91
SPP382	YLR424W	YLR413W	Q06689	675 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	TSR1	Q07381	788 aa	Known RBP	3.09	□□□□□ -1.91
SPP382	YLR424W	SGO1	Q08490	590 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	PCL8	Q08966	492 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	AIM41	Q12032	185 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	YDR061W	Q12298	539 aa		3.09	□□□□□ -1.91
SPP382	YLR424W	TDH1	P00360	332 aa	Known RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms