RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C CYS4P32582 507 aaKnown RBP11□□□□□ -0.65
SPT8YLR055C MAE1P36013 669 aaKnown RBP11□□□□□ -0.65
SPT8YLR055C YBR225WP38321 900 aa11□□□□□ -0.65
SPT8YLR055C SAF1P38352 637 aa11□□□□□ -0.65
SPT8YLR055C AVT6P40074 448 aa11□□□□□ -0.65
SPT8YLR055C YRB2P40517 327 aa11□□□□□ -0.65
SPT8YLR055C LSM3P57743 89 aaKnown RBP11□□□□□ -0.65
SPT8YLR055C ADE12P80210 433 aaKnown RBP11□□□□□ -0.65
SPT8YLR055C NDJ1Q12366 352 aa11□□□□□ -0.65
SPT8YLR055C FBA1P14540 359 aaKnown RBP11□□□□□ -0.65
SPT8YLR055C ART10P18634 518 aaKnown RBP11□□□□□ -0.65
SPT8YLR055C RIM11P38615 370 aa11□□□□□ -0.65
SPT8YLR055C RIM4P38741 713 aa11□□□□□ -0.65
SPT8YLR055C SFB3P38810 929 aa11□□□□□ -0.65
SPT8YLR055C ATM1P40416 690 aa11□□□□□ -0.65
SPT8YLR055C ARP7Q12406 477 aa11□□□□□ -0.65
SPT8YLR055C APE1P14904 514 aa10.99□□□□□ -0.65
SPT8YLR055C FAR1P21268 830 aa10.99□□□□□ -0.65
SPT8YLR055C CCA1P21269 546 aa10.99□□□□□ -0.65
SPT8YLR055C CTR86P25355 563 aa10.99□□□□□ -0.65
SPT8YLR055C RPC82P32349 654 aa10.99□□□□□ -0.65
SPT8YLR055C SAC1P32368 623 aaKnown RBP10.99□□□□□ -0.65
SPT8YLR055C YBL029WP38201 376 aa10.99□□□□□ -0.65
SPT8YLR055C IST2P38250 946 aa10.99□□□□□ -0.65
SPT8YLR055C SRP68P38687 599 aaKnown RBP10.99□□□□□ -0.65
SPT8YLR055C TY4A-JP47023 414 aa10.99□□□□□ -0.65
SPT8YLR055C SLM2P53955 656 aa10.99□□□□□ -0.65
SPT8YLR055C MMT1Q03218 510 aa10.99□□□□□ -0.65
SPT8YLR055C CLU1Q03690 1277 aaKnown RBP10.99□□□□□ -0.65
SPT8YLR055C NHX1Q04121 633 aa10.99□□□□□ -0.65
SPT8YLR055C TSR2Q06672 205 aaKnown RBP10.99□□□□□ -0.65
SPT8YLR055C REH1Q06709 432 aa10.99□□□□□ -0.65
SPT8YLR055C RSB1Q08417 382 aa10.99□□□□□ -0.65
SPT8YLR055C PEX34P25584 144 aa10.98□□□□□ -0.65
SPT8YLR055C SRP101P32916 621 aa10.98□□□□□ -0.65
SPT8YLR055C CSE1P33307 960 aa10.98□□□□□ -0.65
SPT8YLR055C YHB1P39676 399 aaKnown RBP10.98□□□□□ -0.65
SPT8YLR055C CIK1Q01649 594 aa10.98□□□□□ -0.65
SPT8YLR055C ARP9Q05123 467 aa10.98□□□□□ -0.65
SPT8YLR055C REP1P03871 373 aa10.98□□□□□ -0.65
SPT8YLR055C RAP1P11938 827 aa10.98□□□□□ -0.65
SPT8YLR055C GCN3P14741 305 aa10.98□□□□□ -0.65
SPT8YLR055C POL30P15873 258 aaKnown RBP10.98□□□□□ -0.65
SPT8YLR055C HBS1P32769 611 aaKnown RBP10.98□□□□□ -0.65
SPT8YLR055C SKG1P36169 355 aa10.98□□□□□ -0.65
SPT8YLR055C SSZ1P38788 538 aaKnown RBP10.98□□□□□ -0.65
SPT8YLR055C YHR131CP38835 850 aa10.98□□□□□ -0.65
SPT8YLR055C ELP2P42935 788 aa10.98□□□□□ -0.65
SPT8YLR055C PSP1P50896 841 aaKnown RBP10.98□□□□□ -0.65
SPT8YLR055C IMA1P53051 589 aa10.98□□□□□ -0.65
SPT8YLR055C PEX31P53203 462 aa10.98□□□□□ -0.65
SPT8YLR055C ECM9Q02202 377 aa10.98□□□□□ -0.65
SPT8YLR055C SGT1Q08446 395 aa10.98□□□□□ -0.65
SPT8YLR055C YPQ1Q12010 308 aa10.98□□□□□ -0.65
SPT8YLR055C CCP1P00431 361 aa10.97□□□□□ -0.65
SPT8YLR055C TRP3P00937 484 aa10.97□□□□□ -0.65
SPT8YLR055C UGA1P17649 471 aa10.97□□□□□ -0.65
SPT8YLR055C ERG6P25087 383 aaKnown RBP10.97□□□□□ -0.65
SPT8YLR055C PTH2P34222 208 aa10.97□□□□□ -0.65
SPT8YLR055C YJL055WP47044 245 aa10.97□□□□□ -0.65
SPT8YLR055C KTR6P54070 446 aa10.97□□□□□ -0.65
SPT8YLR055C YMR099CQ03161 297 aaKnown RBP10.97□□□□□ -0.65
SPT8YLR055C ERB1Q04660 807 aaKnown RBP10.97□□□□□ -0.65
SPT8YLR055C ECM38Q05902 660 aaPredicted RBP10.97□□□□□ -0.65
SPT8YLR055C BUD20Q08004 166 aaPredicted RBP10.97□□□□□ -0.65
SPT8YLR055C ATG34Q12292 412 aa10.97□□□□□ -0.65
SPT8YLR055C MTF1P14908 341 aaKnown RBP10.96□□□□□ -0.65
SPT8YLR055C YCR090CP25654 182 aaKnown RBP10.96□□□□□ -0.65
SPT8YLR055C YBR241CP38142 488 aa10.96□□□□□ -0.65
SPT8YLR055C DSS1P39112 969 aa10.96□□□□□ -0.65
SPT8YLR055C IMA5P40884 581 aa10.96□□□□□ -0.65
SPT8YLR055C IMD4P50094 524 aaKnown RBP10.96□□□□□ -0.65
SPT8YLR055C YNL095CP53932 642 aa10.96□□□□□ -0.65
SPT8YLR055C NSE5Q03718 556 aa10.96□□□□□ -0.65
SPT8YLR055C PMT7Q06644 662 aa10.96□□□□□ -0.65
SPT8YLR055C AAD4Q07747 329 aa10.96□□□□□ -0.65
SPT8YLR055C HER1Q12276 1246 aa10.96□□□□□ -0.65
SPT8YLR055C YPL247CQ12523 523 aa10.96□□□□□ -0.65
SPT8YLR055C VMA6P32366 345 aaKnown RBP10.95□□□□□ -0.66
SPT8YLR055C SYG1P40528 902 aa10.95□□□□□ -0.66
SPT8YLR055C AIM32Q04689 311 aa10.95□□□□□ -0.66
SPT8YLR055C SYT1Q06836 1226 aa10.95□□□□□ -0.66
SPT8YLR055C DTD1Q07648 150 aaKnown RBP10.95□□□□□ -0.66
SPT8YLR055C YOL159CQ08300 171 aa10.95□□□□□ -0.66
SPT8YLR055C YOR389WQ08912 624 aa10.95□□□□□ -0.66
SPT8YLR055C MDY2Q12285 212 aa10.95□□□□□ -0.66
SPT8YLR055C ABF1P14164 731 aa10.95□□□□□ -0.66
SPT8YLR055C CLB3P24870 427 aa10.95□□□□□ -0.66
SPT8YLR055C YIH1P25637 258 aa10.95□□□□□ -0.66
SPT8YLR055C YBR139WP38109 508 aa10.95□□□□□ -0.66
SPT8YLR055C DIA3P52290 468 aa10.95□□□□□ -0.66
SPT8YLR055C ARE2P53629 642 aaKnown RBP10.95□□□□□ -0.66
SPT8YLR055C HXT15P54854 567 aa10.95□□□□□ -0.66
SPT8YLR055C MGR3Q04472 501 aa10.95□□□□□ -0.66
SPT8YLR055C SSQ1Q05931 657 aaPredicted RBP10.95□□□□□ -0.66
SPT8YLR055C BSP1Q06604 576 aa10.95□□□□□ -0.66
SPT8YLR055C SGO1Q08490 590 aa10.95□□□□□ -0.66
SPT8YLR055C LPX1Q12405 387 aaKnown RBP10.95□□□□□ -0.66
SPT8YLR055C GBP2P25555 427 aaKnown RBP RIP-Chip data10.94□□□□□ -0.66 RIP-Chip
SPT8YLR055C YJR061WP40355 935 aa10.94□□□□□ -0.66
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms