RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C SMC3P47037 1230 aa2.92□□□□□ -1.94
AFB1YLR040C INA17Q02888 182 aa2.92□□□□□ -1.94
AFB1YLR040C YML131WQ03102 365 aa2.92□□□□□ -1.94
AFB1YLR040C VMS1Q04311 632 aaKnown RBP2.92□□□□□ -1.94
AFB1YLR040C RSF1Q05043 376 aa2.92□□□□□ -1.94
AFB1YLR040C INP53Q12271 1107 aa2.92□□□□□ -1.94
AFB1YLR040C TRX2P22803 104 aaKnown RBP2.91□□□□□ -1.94
AFB1YLR040C LCB1P25045 558 aaKnown RBP2.91□□□□□ -1.94
AFB1YLR040C GID7P25569 745 aa2.91□□□□□ -1.94
AFB1YLR040C RGT1P32862 1170 aa2.91□□□□□ -1.94
AFB1YLR040C SNU114P36048 1008 aaKnown RBP2.91□□□□□ -1.94
AFB1YLR040C KTR3P38130 404 aaPredicted RBP2.91□□□□□ -1.94
AFB1YLR040C BZZ1P38822 633 aa2.91□□□□□ -1.94
AFB1YLR040C IAH1P41734 238 aa2.91□□□□□ -1.94
AFB1YLR040C CBK1P53894 756 aa2.91□□□□□ -1.94
AFB1YLR040C SKG3Q06315 1026 aa2.91□□□□□ -1.94
AFB1YLR040C YLR352WQ06479 807 aa2.91□□□□□ -1.94
AFB1YLR040C VIP1Q06685 1146 aaKnown RBP2.91□□□□□ -1.94
AFB1YLR040C SNF3P10870 884 aa2.9□□□□□ -1.95
AFB1YLR040C GLN3P18494 730 aa2.9□□□□□ -1.95
AFB1YLR040C FMP46P36141 133 aaKnown RBP2.9□□□□□ -1.95
AFB1YLR040C ERG7P38604 731 aa2.9□□□□□ -1.95
AFB1YLR040C DIA4P38705 446 aaPredicted RBP2.9□□□□□ -1.95
AFB1YLR040C UBA4P38820 440 aa2.9□□□□□ -1.95
AFB1YLR040C UIP3P39547 235 aa2.9□□□□□ -1.95
AFB1YLR040C YER130CP39959 443 aa2.9□□□□□ -1.95
AFB1YLR040C KAP123P40069 1113 aaKnown RBP2.9□□□□□ -1.95
AFB1YLR040C YJR061WP40355 935 aa2.9□□□□□ -1.95
AFB1YLR040C YIR014WP40570 242 aa2.9□□□□□ -1.95
AFB1YLR040C AZF1P41696 914 aa2.9□□□□□ -1.95
AFB1YLR040C RPS10BP46784 105 aaKnown RBP2.9□□□□□ -1.95
AFB1YLR040C SIP4P46954 829 aa2.9□□□□□ -1.95
AFB1YLR040C LYS4P49367 693 aaPredicted RBP2.9□□□□□ -1.95
AFB1YLR040C CUL3P53202 744 aa2.9□□□□□ -1.95
AFB1YLR040C SOL4P53315 255 aa2.9□□□□□ -1.95
AFB1YLR040C ZDS2P54786 942 aa2.9□□□□□ -1.95
AFB1YLR040C YDR415CQ04033 374 aaPredicted RBP2.9□□□□□ -1.95
AFB1YLR040C YTH1Q06102 208 aaPredicted RBP2.9□□□□□ -1.95
AFB1YLR040C ENT4Q07872 247 aa2.9□□□□□ -1.95
AFB1YLR040C SSP2Q08646 371 aa2.9□□□□□ -1.95
AFB1YLR040C RPS10AQ08745 105 aaPredicted RBP2.9□□□□□ -1.95
AFB1YLR040C APL4Q12028 832 aa2.9□□□□□ -1.95
AFB1YLR040C CSR2Q12734 1121 aa2.9□□□□□ -1.95
AFB1YLR040C PHO2P07269 559 aa2.89□□□□□ -1.95
AFB1YLR040C PWP1P21304 576 aaKnown RBP2.89□□□□□ -1.95
AFB1YLR040C TRS65P32893 560 aa2.89□□□□□ -1.95
AFB1YLR040C YKL050CP35736 922 aa2.89□□□□□ -1.95
AFB1YLR040C RIM2P38127 377 aa2.89□□□□□ -1.95
AFB1YLR040C TSC10P38342 320 aa2.89□□□□□ -1.95
AFB1YLR040C ELO1P39540 310 aa2.89□□□□□ -1.95
AFB1YLR040C RGI2P40188 164 aa2.89□□□□□ -1.95
AFB1YLR040C DPH1P40487 425 aaKnown RBP2.89□□□□□ -1.95
AFB1YLR040C AAD10P47182 288 aa2.89□□□□□ -1.95
AFB1YLR040C RPS7BP48164 190 aaKnown RBP2.89□□□□□ -1.95
AFB1YLR040C EMI2Q04409 500 aaKnown RBP2.89□□□□□ -1.95
AFB1YLR040C YOR111WQ99210 232 aa2.89□□□□□ -1.95
AFB1YLR040C PDB1P32473 366 aaKnown RBP2.88□□□□□ -1.95
AFB1YLR040C YNG2P38806 282 aaKnown RBP2.88□□□□□ -1.95
AFB1YLR040C GUF1P46943 645 aa2.88□□□□□ -1.95
AFB1YLR040C RTT109Q07794 436 aa2.88□□□□□ -1.95
AFB1YLR040C RIX7Q07844 837 aaKnown RBP2.88□□□□□ -1.95
AFB1YLR040C GRC3Q07845 632 aa2.88□□□□□ -1.95
AFB1YLR040C RDR1Q08904 546 aa2.88□□□□□ -1.95
AFB1YLR040C DAP1Q12091 152 aa2.88□□□□□ -1.95
AFB1YLR040C TIP41Q12199 356 aa2.88□□□□□ -1.95
AFB1YLR040C FUM1P08417 488 aaKnown RBP2.87□□□□□ -1.95
AFB1YLR040C SPE2P21182 396 aa2.87□□□□□ -1.95
AFB1YLR040C RPS2P25443 254 aaKnown RBP2.87□□□□□ -1.95
AFB1YLR040C PHD1P36093 366 aa2.87□□□□□ -1.95
AFB1YLR040C SPC34P36131 295 aa2.87□□□□□ -1.95
AFB1YLR040C YJL070CP40361 888 aa2.87□□□□□ -1.95
AFB1YLR040C SGM1P47166 707 aa2.87□□□□□ -1.95
AFB1YLR040C RAD30Q04049 632 aa2.87□□□□□ -1.95
AFB1YLR040C TMA64Q04600 565 aaKnown RBP2.87□□□□□ -1.95
AFB1YLR040C PSR1Q07800 427 aa2.87□□□□□ -1.95
AFB1YLR040C NBP2Q12163 236 aa2.87□□□□□ -1.95
AFB1YLR040C NKP1Q12493 238 aa2.87□□□□□ -1.95
AFB1YLR040C PUT2P07275 575 aa2.86□□□□□ -1.95
AFB1YLR040C YML002WP0CF17 737 aa2.86□□□□□ -1.95
AFB1YLR040C PDA1P16387 420 aaKnown RBP2.86□□□□□ -1.95
AFB1YLR040C KGD1P20967 1014 aaKnown RBP2.86□□□□□ -1.95
AFB1YLR040C RER1P25560 188 aa2.86□□□□□ -1.95
AFB1YLR040C MCM4P30665 933 aaKnown RBP2.86□□□□□ -1.95
AFB1YLR040C SYN8P31377 255 aa2.86□□□□□ -1.95
AFB1YLR040C ROT2P38138 954 aa2.86□□□□□ -1.95
AFB1YLR040C MAL33P38157 468 aa2.86□□□□□ -1.95
AFB1YLR040C PYK2P52489 506 aaKnown RBP2.86□□□□□ -1.95
AFB1YLR040C MEP3P53390 489 aa2.86□□□□□ -1.95
AFB1YLR040C RSM23Q01163 450 aa2.86□□□□□ -1.95
AFB1YLR040C YSA1Q01976 231 aa2.86□□□□□ -1.95
AFB1YLR040C ECM30Q06673 1274 aa2.86□□□□□ -1.95
AFB1YLR040C YPL272CQ08984 517 aa2.86□□□□□ -1.95
AFB1YLR040C LEU9Q12166 604 aaKnown RBP2.86□□□□□ -1.95
AFB1YLR040C PDH1Q12428 516 aaKnown RBP2.86□□□□□ -1.95
AFB1YLR040C MRS3P10566 314 aa2.85□□□□□ -1.95
AFB1YLR040C PMS1P14242 873 aa2.85□□□□□ -1.95
AFB1YLR040C SGV1P23293 657 aaKnown RBP2.85□□□□□ -1.95
AFB1YLR040C ACH1P32316 526 aa2.85□□□□□ -1.95
AFB1YLR040C ERG1P32476 496 aaKnown RBP2.85□□□□□ -1.95
AFB1YLR040C MTR2P34232 184 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms