RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C YET3Q07451 203 aa2.37□□□□□ -2.03
VPS13YLL040C YPR202WQ08993 238 aa2.37□□□□□ -2.03
VPS13YLL040C CCP1P00431 361 aa2.36□□□□□ -2.03
VPS13YLL040C GAL10P04397 699 aa2.36□□□□□ -2.03
VPS13YLL040C GCN3P14741 305 aa2.36□□□□□ -2.03
VPS13YLL040C VBA3P25594 458 aa2.36□□□□□ -2.03
VPS13YLL040C HEM3P28789 327 aa2.36□□□□□ -2.03
VPS13YLL040C FRE1P32791 686 aa2.36□□□□□ -2.03
VPS13YLL040C VBA5P36172 582 aa2.36□□□□□ -2.03
VPS13YLL040C EXO1P39875 702 aa2.36□□□□□ -2.03
VPS13YLL040C IRR1P40541 1150 aa2.36□□□□□ -2.03
VPS13YLL040C SWP82P43554 623 aa2.36□□□□□ -2.03
VPS13YLL040C YGR250CP53316 781 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C PET117Q02771 107 aa2.36□□□□□ -2.03
VPS13YLL040C GAS3Q03655 524 aa2.36□□□□□ -2.03
VPS13YLL040C GRS2Q06817 618 aa2.36□□□□□ -2.03
VPS13YLL040C APC2Q12440 853 aa2.36□□□□□ -2.03
VPS13YLL040C CYS4P32582 507 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C RTG2P32608 588 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C TGL4P36165 910 aa2.36□□□□□ -2.03
VPS13YLL040C LSM1P47017 172 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C SNX4P47057 423 aa2.36□□□□□ -2.03
VPS13YLL040C RMR1P53060 241 aa2.36□□□□□ -2.03
VPS13YLL040C GTR2P53290 341 aa2.36□□□□□ -2.03
VPS13YLL040C AAD15Q08361 143 aa2.36□□□□□ -2.03
VPS13YLL040C YPR027CQ12079 277 aa2.36□□□□□ -2.03
VPS13YLL040C COX4P04037 155 aa2.36□□□□□ -2.03
VPS13YLL040C PBN1P25580 416 aa2.36□□□□□ -2.03
VPS13YLL040C FET3P38993 636 aa2.36□□□□□ -2.03
VPS13YLL040C TAF1P46677 1066 aa2.36□□□□□ -2.03
VPS13YLL040C DRN1P53255 507 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C SNU56Q03782 492 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C NHX1Q04121 633 aa2.36□□□□□ -2.03
VPS13YLL040C YLR001CQ07895 862 aa2.36□□□□□ -2.03
VPS13YLL040C THI21Q08975 551 aa2.36□□□□□ -2.03
VPS13YLL040C YOR338WQ99326 363 aa2.36□□□□□ -2.03
VPS13YLL040C RPP1BP10622 106 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C SNF4P12904 322 aa2.36□□□□□ -2.03
VPS13YLL040C OCA4P25366 362 aa2.36□□□□□ -2.03
VPS13YLL040C RRP7P25368 297 aaPredicted RBP2.36□□□□□ -2.03
VPS13YLL040C IXR1P33417 597 aa2.36□□□□□ -2.03
VPS13YLL040C MRP21P38175 177 aa2.36□□□□□ -2.03
VPS13YLL040C SHE3P38272 425 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C YHL008CP38750 627 aa2.36□□□□□ -2.03
VPS13YLL040C DUN1P39009 513 aa2.36□□□□□ -2.03
VPS13YLL040C JHD1P40034 492 aa2.36□□□□□ -2.03
VPS13YLL040C HXT9P40885 567 aa2.36□□□□□ -2.03
VPS13YLL040C FAR3P46671 204 aa2.36□□□□□ -2.03
VPS13YLL040C HMS2P47175 358 aa2.36□□□□□ -2.03
VPS13YLL040C TOM22P49334 152 aa2.36□□□□□ -2.03
VPS13YLL040C UBC12P52491 188 aa2.36□□□□□ -2.03
VPS13YLL040C SLG1P54867 378 aa2.36□□□□□ -2.03
VPS13YLL040C YLR283WQ05867 314 aa2.36□□□□□ -2.03
VPS13YLL040C PUS5Q06244 254 aa2.36□□□□□ -2.03
VPS13YLL040C MDH1P17505 334 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
VPS13YLL040C SAN1P22470 610 aa2.36□□□□□ -2.03
VPS13YLL040C TPO5P36029 618 aa2.36□□□□□ -2.03
VPS13YLL040C YKR078WP36158 585 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C YCR087C-AP37263 153 aa2.36□□□□□ -2.03
VPS13YLL040C CBR1P38626 284 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C STN1P38960 494 aa2.36□□□□□ -2.03
VPS13YLL040C PTC2P39966 464 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C KRE29P40026 464 aa2.36□□□□□ -2.03
VPS13YLL040C TED1P40533 473 aa2.36□□□□□ -2.03
VPS13YLL040C GDS1P41913 522 aa2.36□□□□□ -2.03
VPS13YLL040C LSB6P42951 607 aa2.36□□□□□ -2.03
VPS13YLL040C UBP6P43593 499 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C RPE1P46969 238 aa2.36□□□□□ -2.03
VPS13YLL040C RPA14P50106 137 aa2.36□□□□□ -2.03
VPS13YLL040C RTT10Q08924 1013 aa2.36□□□□□ -2.03
VPS13YLL040C URA3P03962 267 aa2.36□□□□□ -2.03
VPS13YLL040C COS2P0CX12 379 aa2.36□□□□□ -2.03
VPS13YLL040C COS3P0CX13 379 aa2.36□□□□□ -2.03
VPS13YLL040C CYM1P32898 989 aa2.36□□□□□ -2.03
VPS13YLL040C YEL023CP39992 682 aa2.36□□□□□ -2.03
VPS13YLL040C YER186CP40101 306 aa2.36□□□□□ -2.03
VPS13YLL040C COP1P53622 1201 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C YMR130WQ04223 302 aa2.36□□□□□ -2.03
VPS13YLL040C YMR226CQ05016 267 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C CRD1Q07560 283 aa2.36□□□□□ -2.03
VPS13YLL040C HBT1Q07653 1046 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C TMA46Q12000 345 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C HTA2P04912 132 aa2.36□□□□□ -2.03
VPS13YLL040C SEC53P07283 254 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C SDH2P21801 266 aa2.36□□□□□ -2.03
VPS13YLL040C ISF1P32488 338 aa2.36□□□□□ -2.03
VPS13YLL040C TIF11P38912 153 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C MGS1P40151 587 aa2.36□□□□□ -2.03
VPS13YLL040C PEP8P40335 379 aa2.36□□□□□ -2.03
VPS13YLL040C ROK1P45818 564 aaPredicted RBP2.36□□□□□ -2.03
VPS13YLL040C MDV1P47025 714 aa2.36□□□□□ -2.03
VPS13YLL040C FAP1P53971 965 aa2.36□□□□□ -2.03
VPS13YLL040C CHS1P08004 1131 aa2.36□□□□□ -2.03
VPS13YLL040C CTF13P35203 478 aa2.36□□□□□ -2.03
VPS13YLL040C SNM1P40993 198 aa2.36□□□□□ -2.03
VPS13YLL040C ENT3P47160 408 aa2.36□□□□□ -2.03
VPS13YLL040C SSL1Q04673 461 aaPredicted RBP2.36□□□□□ -2.03
VPS13YLL040C SYT1Q06836 1226 aa2.36□□□□□ -2.03
VPS13YLL040C NGL1Q08213 363 aaKnown RBP2.36□□□□□ -2.03
VPS13YLL040C SLD7Q08457 257 aa2.36□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms