RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W NIT2P47016 307 aa4.67□□□□□ -1.66
ABF1YKL112W TMA22P47089 198 aaPredicted RBP4.67□□□□□ -1.66
ABF1YKL112W RCF2P53721 224 aa4.67□□□□□ -1.66
ABF1YKL112W REG1Q00816 1014 aa4.67□□□□□ -1.66
ABF1YKL112W YMR321CQ04898 105 aa4.67□□□□□ -1.66
ABF1YKL112W HBT1Q07653 1046 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W HER1Q12276 1246 aa4.67□□□□□ -1.66
ABF1YKL112W PNS1Q12412 539 aa4.67□□□□□ -1.66
ABF1YKL112W RRP12Q12754 1228 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W NCB2Q92317 146 aa4.67□□□□□ -1.66
ABF1YKL112W MDM12Q92328 271 aa4.67□□□□□ -1.66
ABF1YKL112W SEM1O94742 89 aa4.67□□□□□ -1.66
ABF1YKL112W GAL4P04386 881 aa4.67□□□□□ -1.66
ABF1YKL112W CHS1P08004 1131 aa4.67□□□□□ -1.66
ABF1YKL112W APE1P14904 514 aa4.67□□□□□ -1.66
ABF1YKL112W RGR1P19263 1082 aa4.67□□□□□ -1.66
ABF1YKL112W MBR1P23493 339 aa4.67□□□□□ -1.66
ABF1YKL112W ARE1P25628 610 aa4.67□□□□□ -1.66
ABF1YKL112W PAT1P25644 796 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W RAD24P32641 659 aa4.67□□□□□ -1.66
ABF1YKL112W SMC1P32908 1225 aa4.67□□□□□ -1.66
ABF1YKL112W ADH5P38113 351 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W PHO88P38264 188 aaPredicted RBP4.67□□□□□ -1.66
ABF1YKL112W PEX28P38848 579 aa4.67□□□□□ -1.66
ABF1YKL112W MGS1P40151 587 aa4.67□□□□□ -1.66
ABF1YKL112W YJR115WP47152 169 aa4.67□□□□□ -1.66
ABF1YKL112W PRP31P49704 494 aaPredicted RBP4.67□□□□□ -1.66
ABF1YKL112W YGL039WP53183 348 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W TIM21P53220 239 aa4.67□□□□□ -1.66
ABF1YKL112W ARC35P53731 342 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W PRM1P53835 661 aa4.67□□□□□ -1.66
ABF1YKL112W YML082WQ04533 649 aaKnown RBP4.67□□□□□ -1.66
ABF1YKL112W GTO3Q04806 366 aa4.67□□□□□ -1.66
ABF1YKL112W MSC3Q05812 728 aa4.67□□□□□ -1.66
ABF1YKL112W BLS1Q06071 122 aa4.67□□□□□ -1.66
ABF1YKL112W GUD1Q07729 489 aa4.67□□□□□ -1.66
ABF1YKL112W FMP25Q08023 583 aa4.67□□□□□ -1.66
ABF1YKL112W YPL260WQ08977 551 aa4.67□□□□□ -1.66
ABF1YKL112W MTR10Q99189 972 aa4.67□□□□□ -1.66
ABF1YKL112W YOS9Q99220 542 aa4.67□□□□□ -1.66
ABF1YKL112W REP1P03871 373 aa4.66□□□□□ -1.66
ABF1YKL112W PEX1P24004 1043 aa4.66□□□□□ -1.66
ABF1YKL112W GID7P25569 745 aa4.66□□□□□ -1.66
ABF1YKL112W KNS1P32350 737 aaPredicted RBP4.66□□□□□ -1.66
ABF1YKL112W MDJ1P35191 511 aa4.66□□□□□ -1.66
ABF1YKL112W RFT1P38206 574 aaPredicted RBP4.66□□□□□ -1.66
ABF1YKL112W FZO1P38297 855 aa4.66□□□□□ -1.66
ABF1YKL112W SSH1P38353 490 aaKnown RBP4.66□□□□□ -1.66
ABF1YKL112W YHR097CP38809 366 aaKnown RBP4.66□□□□□ -1.66
ABF1YKL112W ORC6P38826 435 aa4.66□□□□□ -1.66
ABF1YKL112W TVP23P38962 199 aa4.66□□□□□ -1.66
ABF1YKL112W EFM4P40516 257 aa4.66□□□□□ -1.66
ABF1YKL112W LSM1P47017 172 aaKnown RBP4.66□□□□□ -1.66
ABF1YKL112W RSM26P47141 266 aa4.66□□□□□ -1.66
ABF1YKL112W MSC2Q03455 724 aa4.66□□□□□ -1.66
ABF1YKL112W WHI4Q07655 649 aaKnown RBP4.66□□□□□ -1.66
ABF1YKL112W NGL1Q08213 363 aaKnown RBP4.66□□□□□ -1.66
ABF1YKL112W THP3Q12049 470 aaKnown RBP4.66□□□□□ -1.66
ABF1YKL112W HAL9Q12180 1030 aa4.66□□□□□ -1.66
ABF1YKL112W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
ABF1YKL112W NTO1Q12311 748 aa4.66□□□□□ -1.66
ABF1YKL112W HMS1Q12398 434 aa4.66□□□□□ -1.66
ABF1YKL112W ARP7Q12406 477 aa4.66□□□□□ -1.66
ABF1YKL112W GPA1P08539 472 aa4.65□□□□□ -1.66
ABF1YKL112W TKL1P23254 680 aaKnown RBP4.65□□□□□ -1.66
ABF1YKL112W SYP1P25623 870 aaKnown RBP4.65□□□□□ -1.66
ABF1YKL112W RPD3P32561 433 aa4.65□□□□□ -1.66
ABF1YKL112W DUT1P33317 147 aa4.65□□□□□ -1.66
ABF1YKL112W SQT1P35184 431 aa4.65□□□□□ -1.66
ABF1YKL112W MCR1P36060 302 aaKnown RBP4.65□□□□□ -1.66
ABF1YKL112W DID4P36108 232 aa4.65□□□□□ -1.66
ABF1YKL112W BET3P36149 193 aa4.65□□□□□ -1.66
ABF1YKL112W MRPL10P36520 322 aa4.65□□□□□ -1.66
ABF1YKL112W HMT1P38074 348 aa4.65□□□□□ -1.66
ABF1YKL112W ARP1P38696 384 aa4.65□□□□□ -1.66
ABF1YKL112W FMO1P38866 432 aa4.65□□□□□ -1.66
ABF1YKL112W REV7P38927 245 aa4.65□□□□□ -1.66
ABF1YKL112W GDH3P39708 457 aa4.65□□□□□ -1.66
ABF1YKL112W SSO2P39926 295 aa4.65□□□□□ -1.66
ABF1YKL112W PTC2P39966 464 aaKnown RBP4.65□□□□□ -1.66
ABF1YKL112W UTP8P53276 713 aaKnown RBP4.65□□□□□ -1.66
ABF1YKL112W YLR413WQ06689 675 aa4.65□□□□□ -1.66
ABF1YKL112W DIS3Q08162 1001 aaKnown RBP4.65□□□□□ -1.66
ABF1YKL112W HFI1Q12060 488 aa4.65□□□□□ -1.66
ABF1YKL112W PUS9Q12069 462 aa4.65□□□□□ -1.66
ABF1YKL112W TPK1P06244 397 aa4.65□□□□□ -1.67
ABF1YKL112W STE12P13574 688 aa4.65□□□□□ -1.67
ABF1YKL112W CMK2P22517 447 aa4.65□□□□□ -1.67
ABF1YKL112W PRE9P23638 258 aaKnown RBP4.65□□□□□ -1.67
ABF1YKL112W YCR101CP25607 182 aa4.65□□□□□ -1.67
ABF1YKL112W DAL3P32459 195 aa4.65□□□□□ -1.67
ABF1YKL112W NGG1P32494 702 aa4.65□□□□□ -1.67
ABF1YKL112W SRB2P34162 210 aa4.65□□□□□ -1.67
ABF1YKL112W GCS1P35197 352 aa4.65□□□□□ -1.67
ABF1YKL112W PTC4P38089 393 aa4.65□□□□□ -1.67
ABF1YKL112W GDT1P38301 280 aaPredicted RBP4.65□□□□□ -1.67
ABF1YKL112W EGD2P38879 174 aaKnown RBP4.65□□□□□ -1.67
ABF1YKL112W EMP65P40085 556 aa4.65□□□□□ -1.67
ABF1YKL112W GCV2P49095 1034 aa4.65□□□□□ -1.67
ABF1YKL112W MRK1P50873 501 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 34.6 ms